version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2946 50.36 -1 3545622..3545897 - 91 158522963 - Dole_2953 - hypothetical protein 2947 48.37 -1 3546205..3547434 - 409 158522964 - Dole_2954 - integrase family protein 2948 57.31 0 3548099..3549349 + 416 158522965 - Dole_2955 - AAA family ATPase 2949 52.52 0 3549531..3550562 - 343 158522966 - Dole_2956 - AraC family transcriptional regulator 2950 52.49 0 3550652..3551878 + 408 158522967 - Dole_2957 - uroporphyrinogen-III decarboxylase-like protein 2951 54.84 0 3551923..3552573 + 216 158522968 - Dole_2958 - cobalamin B12-binding domain-containing protein 2952 57.53 0 3552590..3553585 - 331 158522969 - Dole_2959 - hypothetical protein 2953 56.59 0 3553599..3554888 - 429 158522970 - Dole_2960 - hypothetical protein 2954 54.40 0 3555005..3556333 - 442 158522971 - Dole_2961 - PhoH family protein 2955 61.62 0 3556405..3557157 - 250 158522972 - Dole_2962 - vitamin B12 dependent methionine synthase activation region 2956 58.29 0 3557580..3558689 - 369 158522973 - Dole_2963 - hypothetical protein 2957 59.08 0 3558686..3559357 - 223 158522974 - Dole_2964 - cobalamin B12-binding domain-containing protein 2958 55.85 0 3559414..3560088 - 224 158522975 - Dole_2965 - TetR family transcriptional regulator 2959 59.22 0 3560426..3561016 - 196 158522976 - Dole_2966 - hypothetical protein 2960 58.86 0 3561158..3561490 - 110 158522977 - Dole_2967 - hypothetical protein 2961 51.55 0 3561487..3561744 - 85 158522978 - Dole_2968 - glutaredoxin 2962 57.94 0 3561845..3562474 - 209 158522979 - Dole_2969 - nitroreductase 2963 52.78 0 3562749..3563072 - 107 158522980 - Dole_2970 - hypothetical protein 2964 59.56 0 3563253..3563927 - 224 158522981 - Dole_2971 - hypothetical protein 2965 62.13 0 3564153..3565496 + 447 158522982 - Dole_2972 - peptidase M48 Ste24p 2966 54.74 0 3565658..3566755 - 365 158522983 - Dole_2973 - ATPase 2967 58.57 0 3567111..3567740 - 209 158522984 - Dole_2974 - TetR family transcriptional regulator 2968 60.56 0 3567740..3569311 - 523 158522985 - Dole_2975 - carbohydrate kinase FGGY 2969 59.38 0 3569566..3570813 - 415 158522986 - Dole_2976 - saccharopine dehydrogenase 2970 57.13 0 3571105..3572499 + 464 158522987 - Dole_2977 - hypothetical protein 2971 58.44 0 3572785..3573756 - 323 158522988 - Dole_2978 - hypothetical protein 2972 60.95 0 3574303..3574704 + 133 158522989 - Dole_2979 - CrcB protein 2973 62.89 +1 3574906..3576177 + 423 158522990 - Dole_2980 - signal transduction protein 2974 58.76 0 3576677..3577840 + 387 158522991 - Dole_2981 - helix-turn-helix domain-containing protein 2975 60.48 0 3577947..3580385 + 812 158522992 - Dole_2982 - heat shock protein 70 2976 47.93 -1 3581073..3583772 + 899 158522993 - Dole_2983 - CRISPR-associated helicase Cas3 2977 48.18 -1 3583769..3585358 + 529 158522994 - Dole_2984 - CRISPR-associated Cse1 family protein 2978 51.47 0 3585355..3585933 + 192 158522995 - Dole_2985 - CRISPR-associated Cse2 family protein 2979 48.25 -1 3585948..3587060 + 370 158522996 - Dole_2986 - CRISPR-associated Cse4 family protein 2980 55.13 0 3587070..3587849 + 259 158522997 - Dole_2987 - CRISPR-associated Cas5 family protein 2981 48.66 -1 3587900..3588721 + 273 158522998 - Dole_2988 - CRISPR-associated Cse3 family protein 2982 54.95 0 3588767..3589696 + 309 158522999 - Dole_2989 - CRISPR-associated Cas1 family protein 2983 52.52 0 3589698..3590015 + 105 158523000 - Dole_2990 - CRISPR-associated Cas2 family protein 2984 54.02 0 3592702..3592875 - 57 158523001 - Dole_2991 - hypothetical protein 2985 59.54 0 3593880..3595043 - 387 158523002 - Dole_2992 - diguanylate phosphodiesterase 2986 50.54 -1 3595172..3595450 - 92 158523003 - Dole_2993 - putative transcriptional regulator 2987 54.10 0 3595760..3596125 - 121 158523004 - Dole_2994 - hypothetical protein 2988 60.35 0 3596115..3597095 - 326 158523005 - Dole_2995 - patatin 2989 58.54 0 3597233..3597712 + 159 158523006 - Dole_2996 - AsnC family transcriptional regulator 2990 42.01 -2 3597823..3598110 + 95 158523007 - Dole_2997 - excinuclease ABC subunit C 2991 59.27 0 3598304..3599791 + 495 158523008 - Dole_2998 - hypothetical protein 2992 61.80 0 3599788..3601143 + 451 158523009 - Dole_2999 - radical SAM domain-containing protein 2993 55.88 0 3601629..3602036 + 135 158523010 - Dole_3000 - hypothetical protein 2994 61.35 0 3602056..3603354 + 432 158523011 - Dole_3001 - major facilitator transporter 2995 56.34 0 3603430..3604155 + 241 158523012 - Dole_3002 - hypothetical protein 2996 61.54 0 3604200..3604706 + 168 158523013 - Dole_3003 - CMP/dCMP deaminase zinc-binding 2997 57.25 0 3604906..3605553 - 215 158523014 - Dole_3004 - cytochrome B561 2998 58.39 0 3605556..3607259 - 567 158523015 - Dole_3005 - cytochrome c family protein 2999 58.33 0 3607505..3609328 - 607 158523016 - Dole_3006 - AMP-dependent synthetase and ligase 3000 58.30 0 3609328..3610104 - 258 158523017 - Dole_3007 - ABC transporter-related protein 3001 57.49 0 3610111..3610938 - 275 158523018 - Dole_3008 - ABC transporter-related protein 3002 59.46 0 3611015..3612262 - 415 158523019 - Dole_3009 - extracellular ligand-binding receptor 3003 58.33 0 3612316..3613191 - 291 158523020 - Dole_3010 - inner-membrane translocator 3004 56.51 0 3613219..3614331 - 370 158523021 - Dole_3011 - inner-membrane translocator 3005 57.46 0 3614449..3615513 - 354 158523022 - Dole_3012 - magnesium and cobalt transport protein CorA 3006 61.77 0 3615549..3618080 - 843 158523023 - Dole_3013 - MscS mechanosensitive ion channel 3007 57.01 0 3618117..3618644 - 175 158523024 - Dole_3014 - protein of unknown function DUF395 YeeE/YedE 3008 59.20 0 3618770..3619171 - 133 158523025 - Dole_3015 - protein of unknown function DUF395, YeeE/YedE 3009 60.58 0 3619337..3620617 - 426 158523026 - Dole_3016 - MscS mechanosensitive ion channel 3010 58.14 0 3620794..3621579 - 261 158523027 - Dole_3017 - split soret cytochrome c precursor 3011 61.34 0 3621717..3622898 - 393 158523028 - Dole_3018 - putative oxygen-independent coproporphyrinogen III oxidase 3012 62.64 +1 3622879..3623424 - 181 158523029 - Dole_3019 - 2-oxoglutarate synthase 3013 58.15 0 3623421..3624230 - 269 158523030 - Dole_3020 - thiamine pyrophosphate binding domain-containing protein 3014 63.71 +1 3624234..3625382 - 382 158523031 - Dole_3021 - pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 3015 52.70 0 3625375..3625596 - 73 158523032 - Dole_3022 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 3016 59.95 0 3625597..3626757 - 386 158523033 - Dole_3023 - radical SAM domain-containing protein 3017 59.73 0 3627018..3630710 + 1230 158523034 - Dole_3024 - TPR repeat-containing protein 3018 58.65 0 3630727..3631200 + 157 158523035 - Dole_3025 - hypothetical protein 3019 56.54 0 3631248..3633173 - 641 158523036 - Dole_3026 - hypothetical protein 3020 60.35 0 3633315..3634121 - 268 158523037 - Dole_3027 - beta-lactamase domain-containing protein 3021 65.61 +1 3634178..3634651 - 157 158523038 - Dole_3028 - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 3022 60.20 0 3634667..3636832 - 721 158523039 - Dole_3029 - polynucleotide phosphorylase/polyadenylase 3023 50.74 0 3636947..3637216 - 89 158523040 - Dole_3030 - ribosomal protein S15 3024 64.14 +1 3637331..3638242 - 303 158523041 - Dole_3031 - tRNA pseudouridine synthase B 3025 58.79 0 3638239..3639216 - 325 158523042 - Dole_3032 - phosphoesterase domain-containing protein 3026 56.15 0 3639179..3639568 - 129 158523043 - Dole_3033 - ribosome-binding factor A 3027 58.41 0 3639565..3639879 - 104 158523044 - Dole_3034 - hypothetical protein 3028 60.08 0 3639892..3642546 - 884 158523045 - Dole_3035 - translation initiation factor IF-2 3029 57.91 0 3642574..3644001 - 475 158523046 - Dole_3036 - transcription elongation factor NusA 3030 59.52 0 3643998..3644543 - 181 158523047 - Dole_3037 - hypothetical protein 3031 57.94 0 3644827..3645204 - 125 158523048 - Dole_3038 - MerR family transcriptional regulator 3032 62.31 0 3645244..3647655 - 803 158523049 - Dole_3039 - phenylalanyl-tRNA synthetase, beta subunit 3033 60.10 0 3647656..3648660 - 334 158523050 - Dole_3040 - phenylalanyl-tRNA synthetase, alpha subunit 3034 57.26 0 3648793..3649143 - 116 158523051 - Dole_3041 - ribosomal protein L20 3035 49.49 -1 3649195..3649392 - 65 158523052 - Dole_3042 - ribosomal protein L35 3036 55.71 0 3649469..3649888 - 139 158523053 - Dole_3043 - initiation factor 3 3037 61.51 0 3650358..3652298 + 646 158523054 - Dole_3044 - ATP-dependent metalloprotease FtsH 3038 63.93 +1 3652304..3653179 + 291 158523055 - Dole_3045 - dihydropteroate synthase 3039 62.63 +1 3653191..3653958 + 255 158523056 - Dole_3046 - Baf family transcriptional activator 3040 38.23 -2 3654236..3655114 - 292 158523057 - Dole_3047 - hypothetical protein 3041 53.96 0 3656105..3656584 - 159 158523058 - Dole_3048 - hypothetical protein 3042 61.79 0 3657325..3657837 + 170 158523059 - Dole_3049 - nitroreductase 3043 56.36 0 3658097..3658261 - 54 158523060 - Dole_3050 - hypothetical protein 3044 52.30 0 3658258..3658932 - 224 158523061 - Dole_3051 - response regulator receiver protein 3045 59.02 0 3658944..3660107 - 387 158523062 - Dole_3052 - twitching motility protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0