version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2878 59.88 0 3470099..3470584 + 161 158522895 - Dole_2885 - DoxX family protein 2879 55.72 0 3470581..3470982 + 133 158522896 - Dole_2886 - thioredoxin domain-containing protein 2880 63.99 +1 3470979..3471689 + 236 158522897 - Dole_2887 - cytochrome c biogenesis protein transmembrane region 2881 46.61 -1 3471784..3472122 - 112 158522898 - Dole_2888 - hypothetical protein 2882 43.17 -2 3472273..3472587 - 104 158522899 - Dole_2889 - XRE family plasmid maintenance system antidote protein 2883 35.84 -2 3472599..3472877 - 92 158522900 - Dole_2890 - plasmid maintenance system killer 2884 63.33 +1 3473501..3474400 - 299 158522901 - Dole_2891 - hypothetical protein 2885 58.04 0 3474572..3475255 + 227 158522902 - Dole_2892 - TetR family transcriptional regulator 2886 59.58 0 3475243..3476061 + 272 158522903 - Dole_2893 - hypothetical protein 2887 62.73 +1 3476132..3477325 + 397 158522904 - Dole_2894 - RND family efflux transporter MFP subunit 2888 61.57 0 3477338..3480517 + 1059 158522905 - Dole_2895 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 2889 66.11 +1 3480519..3481952 + 477 158522906 - Dole_2896 - RND efflux system outer membrane lipoprotein 2890 54.53 0 3481973..3482878 + 301 158522907 - Dole_2897 - outer membrane phospholipase A 2891 52.68 0 3483494..3484780 + 428 158522908 - Dole_2898 - peptidase C14 caspase catalytic subunit p20 2892 50.71 0 3484851..3486179 + 442 158522909 - Dole_2899 - ankyrin 2893 58.78 0 3486185..3487579 + 464 158522910 - Dole_2900 - peptidase C14 caspase catalytic subunit p20 2894 58.55 0 3487607..3488431 + 274 158522911 - Dole_2901 - hypothetical protein 2895 58.86 0 3488449..3488922 + 157 158522912 - Dole_2902 - CMP/dCMP deaminase zinc-binding 2896 58.38 0 3489235..3490743 + 502 158522913 - Dole_2903 - acyl-CoA dehydrogenase domain-containing protein 2897 60.72 0 3490762..3491904 + 380 158522914 - Dole_2904 - acyl-CoA dehydrogenase type 2 2898 59.91 0 3492082..3492969 + 295 158522915 - Dole_2905 - hypothetical protein 2899 48.14 -1 3493451..3494524 - 357 158522916 - Dole_2906 - integrase family protein 2900 37.37 -2 3495029..3495424 + 131 158522917 - Dole_2907 - hypothetical protein 2901 42.00 -2 3495421..3496332 + 303 158522918 - Dole_2908 - hypothetical protein 2902 48.64 -1 3496626..3497768 + 380 158522919 - Dole_2909 - hypothetical protein 2903 43.80 -2 3498203..3498718 + 171 158522920 - Dole_2910 - hypothetical protein 2904 38.92 -2 3499120..3501429 + 769 158522921 - Dole_2911 - P4 family phage/plasmid primase 2905 30.82 -2 3501838..3502155 + 105 158522922 - Dole_2912 - hypothetical protein 2906 52.27 0 3502213..3502476 - 87 158522923 - Dole_2913 - hypothetical protein 2907 51.18 0 3502457..3502921 - 154 158522924 - Dole_2914 - hypothetical protein 2908 52.94 0 3502933..3503136 - 67 158522925 - Dole_2915 - hypothetical protein 2909 50.60 0 3503163..3503666 - 167 158522926 - Dole_2916 - DNA repair protein RadC 2910 52.43 0 3503677..3504603 - 308 158522927 - Dole_2917 - hypothetical protein 2911 52.30 0 3504732..3505295 - 187 158522928 - Dole_2918 - hypothetical protein 2912 50.91 0 3505433..3507298 - 621 158522929 - Dole_2919 - UvrD/REP helicase 2913 47.62 -1 3507295..3507588 - 97 158522930 - Dole_2920 - hypothetical protein 2914 51.39 0 3507569..3508393 - 274 158522931 - Dole_2921 - hypothetical protein 2915 53.62 0 3508490..3509455 - 321 158522932 - Dole_2922 - zinc finger SWIM domain-containing protein 2916 52.34 0 3509568..3509930 - 120 158522933 - Dole_2923 - single-strand binding protein 2917 46.74 -1 3510163..3510423 + 86 158522934 - Dole_2924 - hypothetical protein 2918 46.30 -1 3510579..3512621 + 680 158522935 - Dole_2925 - N-6 DNA methylase 2919 38.85 -2 3512623..3513927 + 434 158522936 - Dole_2926 - restriction modification system DNA specificity subunit 2920 46.26 -1 3513931..3516993 + 1020 158522937 - Dole_2927 - HsdR family type I site-specific deoxyribonuclease 2921 40.00 -2 3516990..3517649 + 219 158522938 - Dole_2928 - hypothetical protein 2922 39.72 -2 3517786..3518991 - 401 158522939 - Dole_2929 - hypothetical protein 2923 40.87 -2 3518996..3524890 - 1964 158522940 - Dole_2930 - hypothetical protein 2924 36.52 -2 3524887..3525639 - 250 158522941 - Dole_2931 - hypothetical protein 2925 48.30 -1 3525957..3526691 - 244 158522942 - Dole_2932 - nuclease 2926 38.72 -2 3526849..3528018 - 389 158522943 - Dole_2933 - SecC motif-containing protein 2927 47.11 -1 3528729..3529091 - 120 158522944 - Dole_2934 - hypothetical protein 2928 49.38 -1 3529097..3529582 - 161 158522945 - Dole_2935 - hypothetical protein 2929 46.54 -1 3529858..3532356 + 832 158522946 - Dole_2936 - hypothetical protein 2930 50.74 0 3532380..3533195 + 271 158522947 - Dole_2937 - hypothetical protein 2931 48.20 -1 3533294..3533905 + 203 158522948 - Dole_2938 - hypothetical protein 2932 46.56 -1 3533928..3534713 - 261 158522949 - Dole_2939 - hypothetical protein 2933 46.77 -1 3534753..3534953 - 66 158522950 - Dole_2940 - hypothetical protein 2934 46.88 -1 3535039..3535230 - 63 158522951 - Dole_2941 - hypothetical protein 2935 47.25 -1 3535211..3535519 - 102 158522952 - Dole_2942 - hypothetical protein 2936 49.85 -1 3535535..3535867 - 110 158522953 - Dole_2943 - hypothetical protein 2937 46.89 -1 3536619..3537887 + 422 158522954 - Dole_2944 - hypothetical protein 2938 45.10 -1 3538349..3538858 + 169 158522955 - Dole_2945 - hypothetical protein 2939 57.02 0 3538855..3539694 + 279 158522956 - Dole_2946 - hypothetical protein 2940 48.97 -1 3539975..3541375 + 466 158522957 - Dole_2947 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2941 44.64 -1 3542127..3542825 - 232 158522958 - Dole_2948 - hypothetical protein 2942 39.67 -2 3543456..3543944 + 162 158522959 - Dole_2949 - hypothetical protein 2943 50.60 0 3544142..3544390 - 82 158522960 - Dole_2950 - hypothetical protein 2944 50.17 -1 3544558..3544848 - 96 158522961 - Dole_2951 - hypothetical protein 2945 44.84 -1 3545171..3545587 - 138 158522962 - Dole_2952 - hypothetical protein 2946 50.36 -1 3545622..3545897 - 91 158522963 - Dole_2953 - hypothetical protein 2947 48.37 -1 3546205..3547434 - 409 158522964 - Dole_2954 - integrase family protein 2948 57.31 0 3548099..3549349 + 416 158522965 - Dole_2955 - AAA family ATPase 2949 52.52 0 3549531..3550562 - 343 158522966 - Dole_2956 - AraC family transcriptional regulator 2950 52.49 0 3550652..3551878 + 408 158522967 - Dole_2957 - uroporphyrinogen-III decarboxylase-like protein 2951 54.84 0 3551923..3552573 + 216 158522968 - Dole_2958 - cobalamin B12-binding domain-containing protein 2952 57.53 0 3552590..3553585 - 331 158522969 - Dole_2959 - hypothetical protein 2953 56.59 0 3553599..3554888 - 429 158522970 - Dole_2960 - hypothetical protein 2954 54.40 0 3555005..3556333 - 442 158522971 - Dole_2961 - PhoH family protein 2955 61.62 0 3556405..3557157 - 250 158522972 - Dole_2962 - vitamin B12 dependent methionine synthase activation region 2956 58.29 0 3557580..3558689 - 369 158522973 - Dole_2963 - hypothetical protein 2957 59.08 0 3558686..3559357 - 223 158522974 - Dole_2964 - cobalamin B12-binding domain-containing protein 2958 55.85 0 3559414..3560088 - 224 158522975 - Dole_2965 - TetR family transcriptional regulator 2959 59.22 0 3560426..3561016 - 196 158522976 - Dole_2966 - hypothetical protein 2960 58.86 0 3561158..3561490 - 110 158522977 - Dole_2967 - hypothetical protein 2961 51.55 0 3561487..3561744 - 85 158522978 - Dole_2968 - glutaredoxin 2962 57.94 0 3561845..3562474 - 209 158522979 - Dole_2969 - nitroreductase 2963 52.78 0 3562749..3563072 - 107 158522980 - Dole_2970 - hypothetical protein 2964 59.56 0 3563253..3563927 - 224 158522981 - Dole_2971 - hypothetical protein 2965 62.13 0 3564153..3565496 + 447 158522982 - Dole_2972 - peptidase M48 Ste24p 2966 54.74 0 3565658..3566755 - 365 158522983 - Dole_2973 - ATPase 2967 58.57 0 3567111..3567740 - 209 158522984 - Dole_2974 - TetR family transcriptional regulator 2968 60.56 0 3567740..3569311 - 523 158522985 - Dole_2975 - carbohydrate kinase FGGY 2969 59.38 0 3569566..3570813 - 415 158522986 - Dole_2976 - saccharopine dehydrogenase 2970 57.13 0 3571105..3572499 + 464 158522987 - Dole_2977 - hypothetical protein 2971 58.44 0 3572785..3573756 - 323 158522988 - Dole_2978 - hypothetical protein 2972 60.95 0 3574303..3574704 + 133 158522989 - Dole_2979 - CrcB protein 2973 62.89 +1 3574906..3576177 + 423 158522990 - Dole_2980 - signal transduction protein 2974 58.76 0 3576677..3577840 + 387 158522991 - Dole_2981 - helix-turn-helix domain-containing protein 2975 60.48 0 3577947..3580385 + 812 158522992 - Dole_2982 - heat shock protein 70 2976 47.93 -1 3581073..3583772 + 899 158522993 - Dole_2983 - CRISPR-associated helicase Cas3 2977 48.18 -1 3583769..3585358 + 529 158522994 - Dole_2984 - CRISPR-associated Cse1 family protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0