version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2842 54.54 0 3433011..3434222 - 403 158522859 - Dole_2849 - type II secretion system protein 2843 58.61 0 3434703..3435869 - 388 158522860 - Dole_2850 - S-adenosylmethionine synthetase 2844 59.94 0 3436284..3437621 + 445 158522861 - Dole_2851 - hypothetical protein 2845 59.03 0 3437647..3439230 + 527 158522862 - Dole_2852 - D-3-phosphoglycerate dehydrogenase 2846 60.67 0 3439491..3440291 + 266 158522863 - Dole_2853 - methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase 2847 64.34 +1 3440333..3441319 + 328 158522864 - Dole_2854 - ribokinase-like domain-containing protein 2848 60.24 0 3441341..3442009 + 222 158522865 - Dole_2855 - TPR repeat-containing protein 2849 59.56 0 3442041..3443954 - 637 158522866 - Dole_2856 - phospholipid/glycerol acyltransferase 2850 53.48 0 3444203..3444475 - 90 158522867 - Dole_2857 - histone family protein DNA-binding protein 2851 64.39 +1 3444657..3445448 - 263 158522868 - Dole_2858 - metal dependent phosphohydrolase 2852 60.52 0 3445438..3446430 - 330 158522869 - Dole_2859 - molybdenum cofactor biosynthesis protein A 2853 56.85 0 3446440..3447417 - 325 158522870 - Dole_2860 - glycosyl transferase family protein 2854 61.37 0 3447398..3448567 - 389 158522871 - Dole_2861 - hypothetical protein 2855 63.20 +1 3448677..3449369 + 230 158522872 - Dole_2862 - phosphoglycerate mutase 2856 60.46 0 3449425..3449859 + 144 158522873 - Dole_2863 - hypothetical protein 2857 60.59 0 3449874..3450647 + 257 158522874 - Dole_2864 - enoyl-CoA hydratase/isomerase 2858 56.74 0 3451427..3451849 - 140 158522875 - Dole_2865 - hypothetical protein 2859 62.79 +1 3452103..3453083 - 326 158522876 - Dole_2866 - nifR3 family TIM-barrel protein 2860 59.44 0 3453121..3453798 - 225 158522877 - Dole_2867 - hypothetical protein 2861 56.67 0 3453953..3454402 + 149 158522878 - Dole_2868 - CoA-binding domain-containing protein 2862 53.76 0 3454833..3455018 - 61 158522879 - Dole_2869 - hypothetical protein 2863 54.33 0 3455072..3455452 - 126 158522880 - Dole_2870 - desulfoferrodoxin 2864 60.76 0 3455605..3458568 - 987 158522881 - Dole_2871 - peptidase M16C associated domain-containing protein 2865 56.69 0 3458625..3459005 - 126 158522882 - Dole_2872 - hypothetical protein 2866 60.40 0 3459259..3460821 - 520 158522883 - Dole_2873 - radical SAM domain-containing protein 2867 59.79 0 3461139..3461516 + 125 158522884 - Dole_2874 - glyoxalase/bleomycin resistance protein/dioxygenase 2868 60.90 0 3461635..3463281 + 548 158522885 - Dole_2875 - hydroxylamine reductase 2869 54.32 0 3463956..3464360 + 134 158522886 - Dole_2876 - ArsR family transcriptional regulator 2870 61.55 0 3464659..3465831 + 390 158522887 - Dole_2877 - permease 2871 54.27 0 3465867..3466100 + 77 158522888 - Dole_2878 - redox-active disulfide protein 2 2872 58.33 0 3466143..3466346 + 67 158522889 - Dole_2879 - hypothetical protein 2873 56.51 0 3466416..3466937 + 173 158522890 - Dole_2880 - Fe-S cluster domain-containing protein 2874 57.53 0 3466956..3467393 + 145 158522891 - Dole_2881 - protein tyrosine phosphatase 2875 59.61 0 3467409..3468599 + 396 158522892 - Dole_2882 - arsenical-resistance protein 2876 60.89 0 3468663..3469181 + 172 158522893 - Dole_2883 - rhodanese domain-containing protein 2877 65.48 +1 3469171..3470094 + 307 158522894 - Dole_2884 - cation diffusion facilitator family transporter 2878 59.88 0 3470099..3470584 + 161 158522895 - Dole_2885 - DoxX family protein 2879 55.72 0 3470581..3470982 + 133 158522896 - Dole_2886 - thioredoxin domain-containing protein 2880 63.99 +1 3470979..3471689 + 236 158522897 - Dole_2887 - cytochrome c biogenesis protein transmembrane region 2881 46.61 -1 3471784..3472122 - 112 158522898 - Dole_2888 - hypothetical protein 2882 43.17 -2 3472273..3472587 - 104 158522899 - Dole_2889 - XRE family plasmid maintenance system antidote protein 2883 35.84 -2 3472599..3472877 - 92 158522900 - Dole_2890 - plasmid maintenance system killer 2884 63.33 +1 3473501..3474400 - 299 158522901 - Dole_2891 - hypothetical protein 2885 58.04 0 3474572..3475255 + 227 158522902 - Dole_2892 - TetR family transcriptional regulator 2886 59.58 0 3475243..3476061 + 272 158522903 - Dole_2893 - hypothetical protein 2887 62.73 +1 3476132..3477325 + 397 158522904 - Dole_2894 - RND family efflux transporter MFP subunit 2888 61.57 0 3477338..3480517 + 1059 158522905 - Dole_2895 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 2889 66.11 +1 3480519..3481952 + 477 158522906 - Dole_2896 - RND efflux system outer membrane lipoprotein 2890 54.53 0 3481973..3482878 + 301 158522907 - Dole_2897 - outer membrane phospholipase A 2891 52.68 0 3483494..3484780 + 428 158522908 - Dole_2898 - peptidase C14 caspase catalytic subunit p20 2892 50.71 0 3484851..3486179 + 442 158522909 - Dole_2899 - ankyrin 2893 58.78 0 3486185..3487579 + 464 158522910 - Dole_2900 - peptidase C14 caspase catalytic subunit p20 2894 58.55 0 3487607..3488431 + 274 158522911 - Dole_2901 - hypothetical protein 2895 58.86 0 3488449..3488922 + 157 158522912 - Dole_2902 - CMP/dCMP deaminase zinc-binding 2896 58.38 0 3489235..3490743 + 502 158522913 - Dole_2903 - acyl-CoA dehydrogenase domain-containing protein 2897 60.72 0 3490762..3491904 + 380 158522914 - Dole_2904 - acyl-CoA dehydrogenase type 2 2898 59.91 0 3492082..3492969 + 295 158522915 - Dole_2905 - hypothetical protein 2899 48.14 -1 3493451..3494524 - 357 158522916 - Dole_2906 - integrase family protein 2900 37.37 -2 3495029..3495424 + 131 158522917 - Dole_2907 - hypothetical protein 2901 42.00 -2 3495421..3496332 + 303 158522918 - Dole_2908 - hypothetical protein 2902 48.64 -1 3496626..3497768 + 380 158522919 - Dole_2909 - hypothetical protein 2903 43.80 -2 3498203..3498718 + 171 158522920 - Dole_2910 - hypothetical protein 2904 38.92 -2 3499120..3501429 + 769 158522921 - Dole_2911 - P4 family phage/plasmid primase 2905 30.82 -2 3501838..3502155 + 105 158522922 - Dole_2912 - hypothetical protein 2906 52.27 0 3502213..3502476 - 87 158522923 - Dole_2913 - hypothetical protein 2907 51.18 0 3502457..3502921 - 154 158522924 - Dole_2914 - hypothetical protein 2908 52.94 0 3502933..3503136 - 67 158522925 - Dole_2915 - hypothetical protein 2909 50.60 0 3503163..3503666 - 167 158522926 - Dole_2916 - DNA repair protein RadC 2910 52.43 0 3503677..3504603 - 308 158522927 - Dole_2917 - hypothetical protein 2911 52.30 0 3504732..3505295 - 187 158522928 - Dole_2918 - hypothetical protein 2912 50.91 0 3505433..3507298 - 621 158522929 - Dole_2919 - UvrD/REP helicase 2913 47.62 -1 3507295..3507588 - 97 158522930 - Dole_2920 - hypothetical protein 2914 51.39 0 3507569..3508393 - 274 158522931 - Dole_2921 - hypothetical protein 2915 53.62 0 3508490..3509455 - 321 158522932 - Dole_2922 - zinc finger SWIM domain-containing protein 2916 52.34 0 3509568..3509930 - 120 158522933 - Dole_2923 - single-strand binding protein 2917 46.74 -1 3510163..3510423 + 86 158522934 - Dole_2924 - hypothetical protein 2918 46.30 -1 3510579..3512621 + 680 158522935 - Dole_2925 - N-6 DNA methylase 2919 38.85 -2 3512623..3513927 + 434 158522936 - Dole_2926 - restriction modification system DNA specificity subunit 2920 46.26 -1 3513931..3516993 + 1020 158522937 - Dole_2927 - HsdR family type I site-specific deoxyribonuclease 2921 40.00 -2 3516990..3517649 + 219 158522938 - Dole_2928 - hypothetical protein 2922 39.72 -2 3517786..3518991 - 401 158522939 - Dole_2929 - hypothetical protein 2923 40.87 -2 3518996..3524890 - 1964 158522940 - Dole_2930 - hypothetical protein 2924 36.52 -2 3524887..3525639 - 250 158522941 - Dole_2931 - hypothetical protein 2925 48.30 -1 3525957..3526691 - 244 158522942 - Dole_2932 - nuclease 2926 38.72 -2 3526849..3528018 - 389 158522943 - Dole_2933 - SecC motif-containing protein 2927 47.11 -1 3528729..3529091 - 120 158522944 - Dole_2934 - hypothetical protein 2928 49.38 -1 3529097..3529582 - 161 158522945 - Dole_2935 - hypothetical protein 2929 46.54 -1 3529858..3532356 + 832 158522946 - Dole_2936 - hypothetical protein 2930 50.74 0 3532380..3533195 + 271 158522947 - Dole_2937 - hypothetical protein 2931 48.20 -1 3533294..3533905 + 203 158522948 - Dole_2938 - hypothetical protein 2932 46.56 -1 3533928..3534713 - 261 158522949 - Dole_2939 - hypothetical protein 2933 46.77 -1 3534753..3534953 - 66 158522950 - Dole_2940 - hypothetical protein 2934 46.88 -1 3535039..3535230 - 63 158522951 - Dole_2941 - hypothetical protein 2935 47.25 -1 3535211..3535519 - 102 158522952 - Dole_2942 - hypothetical protein 2936 49.85 -1 3535535..3535867 - 110 158522953 - Dole_2943 - hypothetical protein 2937 46.89 -1 3536619..3537887 + 422 158522954 - Dole_2944 - hypothetical protein 2938 45.10 -1 3538349..3538858 + 169 158522955 - Dole_2945 - hypothetical protein 2939 57.02 0 3538855..3539694 + 279 158522956 - Dole_2946 - hypothetical protein 2940 48.97 -1 3539975..3541375 + 466 158522957 - Dole_2947 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2941 44.64 -1 3542127..3542825 - 232 158522958 - Dole_2948 - hypothetical protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0