version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2712 47.19 -1 3279237..3280196 - 319 158522729 - Dole_2719 - hypothetical protein 2713 40.60 -2 3280197..3281297 - 366 158522730 - Dole_2720 - hypothetical protein 2714 49.12 -1 3281813..3282268 + 151 158522731 - Dole_2721 - hypothetical protein 2715 36.55 -2 3282442..3283032 + 196 158522732 - Dole_2722 - hypothetical protein 2716 34.04 -2 3283115..3283396 - 93 158522733 - Dole_2723 - hypothetical protein 2717 51.62 0 3284305..3287115 + 936 158522734 - Dole_2724 - type III restriction protein res subunit 2718 54.65 0 3287159..3288823 + 554 158522735 - Dole_2725 - N-6 DNA methylase 2719 46.71 -1 3288820..3290322 + 500 158522736 - Dole_2726 - restriction modification system DNA specificity subunit 2720 49.78 -1 3290335..3292140 + 601 158522737 - Dole_2727 - ABC transporter 2721 48.90 -1 3292140..3293225 + 361 158522738 - Dole_2728 - hypothetical protein 2722 39.90 -2 3293339..3293917 - 192 158522739 - Dole_2729 - ribonuclease H 2723 37.60 -2 3294871..3295128 - 85 158522740 - Dole_2730 - hypothetical protein 2724 40.30 -2 3295143..3295673 - 176 158522741 - Dole_2731 - hypothetical protein 2725 33.33 -2 3296015..3296989 - 324 158522742 - Dole_2732 - hypothetical protein 2726 41.04 -2 3299028..3299780 + 250 158522743 - Dole_2733 - hypothetical protein 2727 43.29 -2 3300371..3301465 + 364 158522744 - Dole_2734 - integrase family protein 2728 62.49 +1 3301659..3303191 - 510 158522745 - Dole_2735 - Mg chelatase, subunit ChlI 2729 58.39 0 3303452..3304345 + 297 158522746 - Dole_2736 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2730 55.32 0 3304603..3305175 + 190 158522747 - Dole_2737 - hypothetical protein 2731 56.80 0 3305237..3307486 + 749 158522748 - Dole_2738 - PAS/PAC sensor signal transduction histidine kinase 2732 56.12 0 3307518..3308873 + 451 158522749 - Dole_2739 - two component, sigma54 specific, Fis family transcriptional regulator 2733 59.13 0 3308879..3309502 + 207 158522750 - Dole_2740 - putative methyltransferase 2734 52.86 0 3309536..3310042 + 168 158522751 - Dole_2741 - pantetheine-phosphate adenylyltransferase 2735 59.16 0 3310039..3310704 - 221 158522752 - Dole_2742 - protein-L-isoaspartate O-methyltransferase 2736 55.29 0 3310928..3311929 + 333 158522753 - Dole_2743 - TrkA domain-containing protein 2737 53.06 0 3312037..3312624 - 195 158522754 - Dole_2744 - 5-formyltetrahydrofolate cyclo-ligase 2738 57.43 0 3312836..3314113 + 425 158522755 - Dole_2745 - seryl-tRNA synthetase 2739 59.50 0 3314110..3315615 + 501 158522756 - Dole_2746 - threonine synthase 2740 52.61 0 3315612..3316358 + 248 158522757 - Dole_2747 - TPR repeat-containing protein 2741 55.96 0 3316539..3317201 - 220 158522758 - Dole_2748 - abortive infection protein 2742 59.78 0 3317281..3318297 - 338 158522759 - Dole_2749 - D-alanine--D-alanine ligase 2743 43.03 -2 3318514..3318843 - 109 158522760 - Dole_2750 - HicB family protein 2744 40.23 -2 3318827..3319087 - 86 158522761 - Dole_2751 - hypothetical protein 2745 45.79 -1 3319575..3319871 - 98 158522762 - Dole_2752 - hypothetical protein 2746 46.52 -1 3319868..3320140 - 90 158522763 - Dole_2753 - hypothetical protein 2747 60.75 0 3320556..3321383 - 275 158522764 - Dole_2754 - short-chain dehydrogenase/reductase SDR 2748 60.72 0 3321610..3324300 + 896 158522765 - Dole_2755 - CBS domain-containing protein 2749 61.09 0 3324679..3325377 + 232 158522766 - Dole_2756 - peptidase M50 2750 61.62 0 3325403..3326392 + 329 158522767 - Dole_2757 - tryptophanyl-tRNA synthetase 2751 55.69 0 3326389..3327135 + 248 158522768 - Dole_2758 - chromosome segregation and condensation protein ScpA 2752 61.22 0 3327132..3328031 + 299 158522769 - Dole_2759 - segregation and condensation protein B 2753 53.33 0 3328268..3328792 + 174 158522770 - Dole_2760 - cyclic nucleotide-binding protein 2754 60.74 0 3328822..3329868 + 348 158522771 - Dole_2761 - radical SAM domain-containing protein 2755 59.72 0 3330001..3331224 - 407 158522772 - Dole_2762 - hypothetical protein 2756 58.83 0 3331280..3332134 - 284 158522773 - Dole_2763 - substrate-binding region of ABC-type glycine betaine transport system 2757 59.38 0 3332247..3333083 - 278 158522774 - Dole_2764 - binding-protein-dependent transport systems inner membrane component 2758 59.92 0 3333076..3334275 - 399 158522775 - Dole_2765 - glycine betaine/L-proline ABC transporter, ATPase subunit 2759 56.52 0 3334858..3338178 - 1106 158522776 - Dole_2766 - hypothetical protein 2760 58.65 0 3338733..3339518 + 261 158522777 - Dole_2767 - GntR family transcriptional regulator 2761 61.89 0 3339515..3340978 + 487 158522778 - Dole_2768 - hypothetical protein 2762 58.77 0 3340980..3342119 + 379 158522779 - Dole_2769 - 2-hydroxyglutaryl-CoA dehydratase D-component 2763 57.39 0 3342147..3343547 + 466 158522780 - Dole_2770 - 2-hydroxyglutaryl-CoA dehydratase D-component 2764 60.32 0 3343544..3344347 + 267 158522781 - Dole_2771 - putative CoA-substrate-specific enzyme activase 2765 60.54 0 3344344..3345126 + 260 158522782 - Dole_2772 - putative CoA-substrate-specific enzyme activase 2766 58.87 0 3345538..3346281 + 247 158522783 - Dole_2773 - hypothetical protein 2767 61.80 0 3346281..3347411 + 376 158522784 - Dole_2774 - 2-hydroxyglutaryl-CoA dehydratase D-component 2768 60.00 0 3347414..3348823 + 469 158522785 - Dole_2775 - 2-hydroxyglutaryl-CoA dehydratase D-component 2769 61.90 0 3349139..3349957 + 272 158522786 - Dole_2776 - putative CoA-substrate-specific enzyme activase 2770 59.51 0 3350176..3350958 + 260 158522787 - Dole_2777 - cobyrinic acid ac-diamide synthase 2771 37.90 -2 3352172..3352675 - 167 158522788 - Dole_2778 - hypothetical protein 2772 58.94 0 3353790..3355019 - 409 158522789 - Dole_2779 - L,L-diaminopimelate aminotransferase 2773 54.86 0 3355111..3355398 + 95 158522790 - Dole_2780 - hypothetical protein 2774 60.27 0 3355450..3356121 + 223 158522791 - Dole_2781 - SNARE associated Golgi protein 2775 61.22 0 3356393..3357568 - 391 158522792 - Dole_2782 - cell division protein FtsZ 2776 61.76 0 3357634..3358857 - 407 158522793 - Dole_2783 - cell division protein FtsA 2777 62.54 +1 3358839..3359735 - 298 158522794 - Dole_2784 - polypeptide-transport-associated domain-containing protein 2778 64.44 +1 3359722..3360663 - 313 158522795 - Dole_2785 - UDP-N-acetylenolpyruvoylglucosamine reductase 2779 62.15 0 3360683..3362056 - 457 158522796 - Dole_2786 - UDP-N-acetylmuramate--alanine ligase 2780 63.47 +1 3362047..3363204 - 385 158522797 - Dole_2787 - UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 2781 59.95 0 3363197..3364312 - 371 158522798 - Dole_2788 - cell division protein FtsW 2782 61.88 0 3364299..3365678 - 459 158522799 - Dole_2789 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 2783 58.06 0 3365678..3366757 - 359 158522800 - Dole_2790 - phospho-N-acetylmuramoyl-pentapeptide-transferase 2784 62.44 +1 3366760..3368178 - 472 158522801 - Dole_2791 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase 2785 63.96 +1 3368209..3369798 - 529 158522802 - Dole_2792 - UDP-N-acetylmuramyl-tripeptide synthetase 2786 60.82 0 3369795..3371555 - 586 158522803 - Dole_2793 - peptidoglycan glycosyltransferase 2787 59.93 0 3371552..3371848 - 98 158522804 - Dole_2794 - hypothetical protein 2788 60.81 0 3371865..3372803 - 312 158522805 - Dole_2795 - S-adenosyl-methyltransferase MraW 2789 51.93 0 3372805..3373245 - 146 158522806 - Dole_2796 - MraZ protein 2790 63.15 +1 3373488..3374483 + 331 158522807 - Dole_2797 - putative tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase 2791 61.48 0 3374604..3377150 + 848 158522808 - Dole_2798 - penicillin amidase 2792 61.75 0 3377449..3378303 + 284 158522809 - Dole_2799 - alpha/beta hydrolase fold 2793 60.50 0 3378320..3379390 - 356 158522810 - Dole_2800 - GTPase EngC 2794 58.54 0 3379784..3381949 - 721 158522811 - Dole_2801 - copper-translocating P-type ATPase 2795 56.45 0 3382148..3382783 - 211 158522812 - Dole_2802 - hypothetical protein 2796 60.33 0 3382767..3383318 - 183 158522813 - Dole_2803 - protein of unknown function DUF395 YeeE/YedE 2797 56.35 0 3383315..3383857 - 180 158522814 - Dole_2804 - hypothetical protein 2798 55.83 0 3383860..3384948 - 362 158522815 - Dole_2805 - rhodanese domain-containing protein 2799 53.16 0 3384964..3385437 - 157 158522816 - Dole_2806 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 2800 61.74 0 3386458..3387858 - 466 158522817 - Dole_2807 - two component, sigma54 specific, Fis family transcriptional regulator 2801 62.02 0 3387855..3389642 - 595 158522818 - Dole_2808 - PAS/PAC sensor signal transduction histidine kinase 2802 55.28 0 3390075..3390557 + 160 158522819 - Dole_2809 - hypothetical protein 2803 54.95 0 3391049..3391432 + 127 158522820 - Dole_2810 - response regulator receiver protein 2804 62.39 0 3391485..3392981 - 498 158522821 - Dole_2811 - multi-sensor signal transduction histidine kinase 2805 59.27 0 3392971..3394458 - 495 158522822 - Dole_2812 - PAS/PAC sensor signal transduction histidine kinase 2806 60.79 0 3394644..3396242 + 532 158522823 - Dole_2813 - D-3-phosphoglycerate dehydrogenase 2807 50.15 -1 3396365..3396691 + 108 158522824 - Dole_2814 - hypothetical protein 2808 59.40 0 3396688..3398145 + 485 158522825 - Dole_2815 - protease Do 2809 58.39 0 3398264..3399121 + 285 158522826 - Dole_2816 - 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 2810 58.81 0 3399258..3400211 + 317 158522827 - Dole_2817 - ribose-phosphate pyrophosphokinase 2811 57.49 0 3400263..3400916 + 217 158522828 - Dole_2818 - ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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