version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 195 55.26 0 213550..214215 + 221 158520212 - Dole_0195 - gamma-subunit of ethylbenzene dehydrogenase 196 59.91 0 214273..215442 + 389 158520213 - Dole_0196 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 197 56.13 0 215484..216233 + 249 158520214 - Dole_0197 - delta-subunit of ethylbenzene dehydrogenase 198 59.13 0 216247..217002 + 251 158520215 - Dole_0198 - cytochrome b/b6 domain-containing protein 199 55.78 0 217025..217768 + 247 158520216 - Dole_0199 - hypothetical protein 200 56.90 0 217765..219996 + 743 158520217 - Dole_0200 - cytochrome c class I 201 58.64 0 220159..222813 + 884 158520218 - Dole_0201 - carbohydrate-binding and sugar hydrolysis 202 63.65 +1 222953..224179 + 408 158520219 - Dole_0202 - molybdenum cofactor synthesis domain-containing protein 203 57.34 0 224226..225737 + 503 158520220 - Dole_0203 - acyl-CoA dehydrogenase domain-containing protein 204 61.81 0 225801..226913 + 370 158520221 - Dole_0204 - acyl-CoA dehydrogenase domain-containing protein 205 60.65 0 227044..228987 + 647 158520222 - Dole_0205 - methyl-accepting chemotaxis sensory transducer 206 60.42 0 229297..229776 + 159 158520223 - Dole_0206 - molybdopterin-guanine dinucleotide biosynthesis protein B 207 56.20 0 229858..230220 + 120 158520224 - Dole_0207 - ModE family transcriptional regulator 208 50.00 -1 230312..231187 + 291 158520225 - Dole_0208 - molybdenum ABC transporter, periplasmic molybdate-binding protein 209 49.29 -1 231184..231960 + 258 158520226 - Dole_0209 - binding-protein-dependent transport systems inner membrane component 210 51.47 0 231957..233048 + 363 158520227 - Dole_0210 - ABC transporter-related protein 211 44.44 -2 233101..233361 - 86 158520228 - Dole_0211 - hypothetical protein 212 60.69 0 233500..234420 + 306 158520229 - Dole_0212 - ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein 213 60.61 0 234410..235168 + 252 158520230 - Dole_0213 - binding-protein-dependent transport systems inner membrane component 214 57.88 0 235165..236256 + 363 158520231 - Dole_0214 - ABC transporter-related protein 215 60.49 0 236378..237106 + 242 158520232 - Dole_0215 - hypothetical protein 216 50.41 -1 237312..237557 + 81 158520233 - Dole_0216 - hypothetical protein 217 56.55 0 237669..238706 - 345 158520234 - Dole_0217 - lipid-binding START domain-containing protein 218 59.73 0 238924..239370 + 148 158520235 - Dole_0218 - hypothetical protein 219 57.18 0 239438..241240 + 600 158520236 - Dole_0219 - radical SAM domain-containing protein 220 51.79 0 241252..241419 + 55 158520237 - Dole_0220 - hypothetical protein 221 59.52 0 241716..245924 + 1402 158520238 - Dole_0221 - pyruvate phosphate dikinase PEP/pyruvate-binding 222 60.13 0 246005..247258 + 417 158520239 - Dole_0222 - glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 223 58.59 0 247351..247746 + 131 158520240 - Dole_0223 - response regulator receiver protein 224 60.97 0 247845..249020 - 391 158520241 - Dole_0224 - acetyl-CoA acetyltransferase 225 56.89 0 249046..250896 - 616 158520242 - Dole_0225 - AMP-dependent synthetase and ligase 226 53.83 0 251032..251592 - 186 158520243 - Dole_0226 - sterol-binding domain-containing protein 227 42.17 -2 251659..251907 + 82 158520244 - Dole_0227 - hypothetical protein 228 48.54 -1 251955..252572 + 205 158520245 - Dole_0228 - TetR family transcriptional regulator 229 61.73 0 252624..253778 - 384 158520246 - Dole_0229 - DNA-directed DNA polymerase 230 62.04 0 253885..254403 - 172 158520247 - Dole_0230 - hypothetical protein 231 61.70 0 254396..255181 - 261 158520248 - Dole_0231 - hypothetical protein 232 58.23 0 255885..256868 + 327 158520249 - Dole_0232 - hypothetical protein 233 50.79 0 256865..257626 + 253 158520250 - Dole_0233 - hypothetical protein 234 56.08 0 258242..258874 + 210 158520251 - Dole_0234 - LexA family transcriptional regulator 235 60.17 0 258905..259720 + 271 158520252 - Dole_0235 - hypothetical protein 236 64.26 +1 259717..260922 + 401 158520253 - Dole_0236 - DNA-directed DNA polymerase 237 60.86 0 260928..263939 + 1003 158520254 - Dole_0237 - DNA polymerase III, alpha subunit 238 36.38 -2 264050..265327 + 425 158520255 - Dole_0238 - hypothetical protein 239 55.89 0 265545..266537 - 330 158520256 - Dole_0239 - transcriptional regulator-like protein 240 52.30 0 266668..268929 + 753 158520257 - Dole_0240 - ATPase central domain-containing protein 241 57.48 0 269095..270585 + 496 158520258 - Dole_0241 - hypothetical protein 242 35.82 -2 270853..271938 - 361 158520259 - Dole_0242 - hypothetical protein 243 49.44 -1 272158..273219 - 353 158520260 - Dole_0243 - hypothetical protein 244 52.23 0 273252..274013 - 253 158520261 - Dole_0244 - hypothetical protein 245 55.18 0 274010..277126 - 1038 158520262 - Dole_0245 - HsdR family type I site-specific deoxyribonuclease 246 56.33 0 277119..279092 - 657 158520263 - Dole_0246 - hypothetical protein 247 42.38 -2 279465..281609 - 714 158520264 - Dole_0247 - hypothetical protein 248 43.56 -2 281606..283453 - 615 158520265 - Dole_0248 - hypothetical protein 249 49.41 -1 283450..284631 - 393 158520266 - Dole_0249 - restriction modification system DNA specificity subunit 250 54.17 0 284628..285779 - 383 158520267 - Dole_0250 - putative transcriptional regulator 251 56.28 0 285776..288202 - 808 158520268 - Dole_0251 - type I restriction-modification system, M subunit 252 46.11 -1 288729..289730 + 333 158520269 - Dole_0252 - hypothetical protein 253 56.10 0 289727..290275 + 182 158520270 - Dole_0253 - cell division GTPase-like protein 254 52.33 0 290333..290890 + 185 158520271 - Dole_0254 - hypothetical protein 255 54.80 0 290877..291491 + 204 158520272 - Dole_0255 - tubulin/FtsZ GTPase 256 45.36 -1 291527..292033 + 168 158520273 - Dole_0256 - hypothetical protein 257 54.14 0 292089..292511 + 140 158520274 - Dole_0257 - hypothetical protein 258 48.27 -1 292508..293143 + 211 158520275 - Dole_0258 - hypothetical protein 259 41.80 -2 293145..294113 + 322 158520276 - Dole_0259 - hypothetical protein 260 53.24 0 294125..295450 + 441 158520277 - Dole_0260 - beta-lactamase domain-containing protein 261 54.90 0 295666..299319 + 1217 158520278 - Dole_0261 - DNA polymerase III, alpha subunit 262 57.07 0 299412..300380 + 322 158520279 - Dole_0262 - hypothetical protein 263 35.32 -2 300384..300938 - 184 158520280 - Dole_0263 - GCN5-related N-acetyltransferase 264 54.55 0 301074..301667 - 197 158520281 - Dole_0264 - hypothetical protein 265 55.31 0 302163..303782 + 539 158520282 - Dole_0265 - ADP-ribosylation/crystallin J1 266 58.93 0 304254..305339 - 361 158520283 - Dole_0266 - amine oxidase 267 58.78 0 305854..306462 + 202 158520284 - Dole_0267 - hypothetical protein 268 58.76 0 306709..308604 + 631 158520285 - Dole_0268 - PpiC-type peptidyl-prolyl cis-trans isomerase 269 55.16 0 308652..308903 + 83 158520286 - Dole_0269 - hypothetical protein 270 57.71 0 308974..309252 + 92 158520287 - Dole_0270 - hypothetical protein 271 61.15 0 309555..310406 + 283 158520288 - Dole_0271 - 3-hydroxybutyryl-CoA dehydrogenase 272 58.19 0 310421..310597 + 58 158520289 - Dole_0272 - hypothetical protein 273 59.92 0 310875..311600 - 241 158520290 - Dole_0273 - integral membrane protein TerC 274 48.01 -1 312270..314300 + 676 158520291 - Dole_0274 - radical SAM domain-containing protein 275 34.69 -2 314319..316082 + 587 158520292 - Dole_0275 - TPR repeat-containing protein 276 49.94 -1 316441..318150 + 569 158520293 - Dole_0276 - N-6 DNA methylase 277 42.59 -2 318150..319391 + 413 158520294 - Dole_0277 - restriction modification system DNA specificity subunit 278 48.99 -1 319388..322357 + 989 158520295 - Dole_0278 - hypothetical protein 279 43.49 -2 322487..323608 + 373 158520296 - Dole_0279 - hypothetical protein 280 42.88 -2 323605..324348 + 247 158520297 - Dole_0280 - Gp37Gp68 family protein 281 53.37 0 325517..326140 + 207 158520298 - Dole_0281 - hypothetical protein 282 52.38 0 326227..327066 + 279 158520299 - Dole_0282 - hypothetical protein 283 52.35 0 327183..328139 + 318 158520300 - Dole_0283 - hypothetical protein 284 45.31 -1 328213..328404 + 63 158520301 - Dole_0284 - hypothetical protein 285 49.40 -1 328431..328598 + 55 158520302 - Dole_0285 - hypothetical protein 286 52.60 0 328964..329290 + 108 158520303 - Dole_0286 - HIRAN 287 48.68 -1 329447..330964 + 505 158520304 - Dole_0287 - hypothetical protein 288 45.13 -1 331373..332584 + 403 158520305 - Dole_0288 - integrase family protein 289 60.58 0 332755..333066 - 103 158520306 - Dole_0289 - hypothetical protein 290 57.92 0 333067..333672 - 201 158520307 - Dole_0290 - phosphoserine phosphatase 291 61.20 0 333695..335011 - 438 158520308 - Dole_0291 - homoserine dehydrogenase 292 57.82 0 335021..336196 - 391 158520309 - Dole_0292 - aminotransferase class I and II 293 57.06 0 336565..337605 + 346 158520310 - Dole_0293 - phosphoribosylformylglycinamidine cyclo-ligase 294 63.07 +1 337944..339026 + 360 158520311 - Dole_0294 - metalloendopeptidase glycoprotease family 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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