version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2369 62.89 +1 2859650..2861530 - 626 158522386 - Dole_2375 - excinuclease ABC, C subunit 2370 62.12 0 2861743..2863743 - 666 158522387 - Dole_2376 - excinuclease ABC subunit B 2371 62.84 +1 2863799..2864923 - 374 158522388 - Dole_2377 - hypothetical protein 2372 60.48 0 2864934..2866874 - 646 158522389 - Dole_2378 - hypothetical protein 2373 64.71 +1 2867073..2867480 + 135 158522390 - Dole_2379 - hypothetical protein 2374 58.64 0 2867502..2868734 - 410 158522391 - Dole_2380 - diguanylate cyclase 2375 57.71 0 2868796..2870727 - 643 158522392 - Dole_2381 - Na/Pi-cotransporter II-related protein 2376 58.79 0 2870747..2872675 - 642 158522393 - Dole_2382 - hypothetical protein 2377 56.33 0 2872703..2873176 - 157 158522394 - Dole_2383 - hypothetical protein 2378 59.92 0 2873566..2876187 + 873 158522395 - Dole_2384 - hypothetical protein 2379 55.13 0 2876169..2876402 + 77 158522396 - Dole_2385 - hypothetical protein 2380 58.20 0 2876441..2876818 + 125 158522397 - Dole_2386 - hypothetical protein 2381 58.75 0 2876992..2878380 - 462 158522398 - Dole_2387 - hypothetical protein 2382 53.26 0 2878373..2879782 - 469 158522399 - Dole_2388 - hypothetical protein 2383 58.82 0 2880113..2880775 + 220 158522400 - Dole_2389 - methyltransferase type 11 2384 55.74 0 2880779..2880961 + 60 158522401 - Dole_2390 - hypothetical protein 2385 57.14 0 2880958..2881923 + 321 158522402 - Dole_2391 - hypothetical protein 2386 57.19 0 2882031..2883539 - 502 158522403 - Dole_2392 - histidine kinase 2387 63.86 +1 2883670..2886129 - 819 158522404 - Dole_2393 - pyruvate, water dikinase 2388 55.12 0 2886165..2886545 - 126 158522405 - Dole_2394 - response regulator receiver protein 2389 60.49 0 2886577..2887548 - 323 158522406 - Dole_2395 - hypothetical protein 2390 62.14 0 2887597..2888016 - 139 158522407 - Dole_2396 - response regulator receiver protein 2391 59.78 0 2888109..2888921 - 270 158522408 - Dole_2397 - hypothetical protein 2392 60.66 0 2888956..2889771 - 271 158522409 - Dole_2398 - response regulator receiver protein 2393 62.12 0 2889799..2891625 - 608 158522410 - Dole_2399 - TrkA domain-containing protein 2394 58.61 0 2891688..2892134 - 148 158522411 - Dole_2400 - hypothetical protein 2395 63.19 +1 2892349..2893698 - 449 158522412 - Dole_2401 - two component, sigma54 specific, Fis family transcriptional regulator 2396 56.67 0 2893793..2894152 - 119 158522413 - Dole_2402 - hypothetical protein 2397 58.08 0 2894180..2894470 - 96 158522414 - Dole_2403 - GntR family transcriptional regulator 2398 59.06 0 2894699..2896000 + 433 158522415 - Dole_2404 - glucose-methanol-choline oxidoreductase 2399 58.37 0 2896051..2896797 - 248 158522416 - Dole_2405 - glycosyl transferase family protein 2400 62.01 0 2897208..2898344 + 378 158522417 - Dole_2406 - hypothetical protein 2401 55.93 0 2898358..2899773 - 471 158522418 - Dole_2407 - radical SAM domain-containing protein 2402 56.48 0 2899888..2901468 - 526 158522419 - Dole_2408 - hypothetical protein 2403 52.13 0 2901477..2902205 - 242 158522420 - Dole_2409 - peptidylprolyl isomerase FKBP-type 2404 54.44 0 2902320..2904266 + 648 158522421 - Dole_2410 - TPR repeat-containing protein 2405 54.18 0 2904263..2905792 + 509 158522422 - Dole_2411 - hypothetical protein 2406 55.22 0 2905789..2906478 + 229 158522423 - Dole_2412 - glycosyl transferase family protein 2407 54.10 0 2906556..2908337 - 593 158522424 - Dole_2413 - TPR repeat-containing protein 2408 60.34 0 2908334..2910103 - 589 158522425 - Dole_2414 - TPR repeat-containing protein 2409 57.79 0 2910233..2912293 - 686 158522426 - Dole_2415 - TPR repeat-containing protein 2410 57.80 0 2912298..2913707 - 469 158522427 - Dole_2416 - radical SAM domain-containing protein 2411 57.54 0 2913887..2916175 + 762 158522428 - Dole_2417 - TPR repeat-containing protein 2412 57.65 0 2916172..2918655 + 827 158522429 - Dole_2418 - TPR repeat-containing protein 2413 58.22 0 2918652..2921030 + 792 158522430 - Dole_2419 - TPR repeat-containing protein 2414 59.43 0 2921534..2922058 + 174 158522431 - Dole_2420 - hypothetical protein 2415 60.28 0 2922174..2922956 + 260 158522432 - Dole_2421 - hypothetical protein 2416 53.31 0 2923243..2923998 + 251 158522433 - Dole_2422 - peptidase C39 bacteriocin processing 2417 59.74 0 2924015..2926063 + 682 158522434 - Dole_2423 - SH3 type 3 domain-containing protein 2418 58.86 0 2926088..2927830 + 580 158522435 - Dole_2424 - membrane protein involved in aromatic hydrocarbon degradation 2419 55.48 0 2928028..2929698 + 556 158522436 - Dole_2425 - hypothetical protein 2420 62.55 +1 2929790..2930566 - 258 158522437 - Dole_2426 - ribulose-1,5-biphosphate synthetase 2421 65.03 +1 2930646..2931926 - 426 158522438 - Dole_2427 - thiamine biosynthesis protein ThiC 2422 56.35 0 2932473..2933906 + 477 158522439 - Dole_2428 - radical SAM domain-containing protein 2423 61.17 0 2934001..2935455 + 484 158522440 - Dole_2429 - hypothetical protein 2424 62.65 +1 2935439..2937553 + 704 158522441 - Dole_2430 - spermine synthase 2425 61.29 0 2937531..2938721 + 396 158522442 - Dole_2431 - radical SAM domain-containing protein 2426 57.59 0 2938865..2940472 + 535 158522443 - Dole_2432 - radical SAM domain-containing protein 2427 58.58 0 2940502..2942010 - 502 158522444 - Dole_2433 - radical SAM domain-containing protein 2428 58.48 0 2942007..2943569 - 520 158522445 - Dole_2434 - radical SAM domain-containing protein 2429 54.16 0 2943570..2945144 - 524 158522446 - Dole_2435 - radical SAM domain-containing protein 2430 55.81 0 2945429..2945695 + 88 158522447 - Dole_2436 - ribosomal protein S20 2431 61.99 0 2945760..2946293 - 177 158522448 - Dole_2437 - hypothetical protein 2432 60.85 0 2946608..2949205 - 865 158522449 - Dole_2438 - leucyl-tRNA synthetase 2433 60.13 0 2949534..2951033 + 499 158522450 - Dole_2439 - ribonuclease 2434 57.98 0 2951123..2951905 + 260 158522451 - Dole_2440 - hypothetical protein 2435 55.10 0 2951999..2952292 + 97 158522452 - Dole_2441 - preprotein translocase, YajC subunit 2436 60.89 0 2952318..2953892 + 524 158522453 - Dole_2442 - protein-export membrane protein SecD 2437 56.42 0 2953917..2954960 + 347 158522454 - Dole_2443 - preprotein translocase subunit SecF 2438 63.42 +1 2955310..2956479 + 389 158522455 - Dole_2444 - DNA protecting protein DprA 2439 58.37 0 2956710..2958986 + 758 158522456 - Dole_2445 - DNA topoisomerase I 2440 59.44 0 2959008..2960819 + 603 158522457 - Dole_2446 - chloride channel core 2441 56.59 0 2961314..2962543 + 409 158522458 - Dole_2447 - diguanylate cyclase with PAS/PAC sensor 2442 60.18 0 2962653..2962991 - 112 158522459 - Dole_2448 - histidine triad (HIT) protein 2443 55.76 0 2963033..2963518 + 161 158522460 - Dole_2449 - hypothetical protein 2444 62.13 0 2963759..2964442 + 227 158522461 - Dole_2450 - cell division ATP-binding protein FtsE 2445 57.48 0 2964439..2965320 + 293 158522462 - Dole_2451 - hypothetical protein 2446 59.32 0 2965383..2966675 + 430 158522463 - Dole_2452 - peptidase M23B 2447 58.41 0 2966725..2968092 + 455 158522464 - Dole_2453 - carboxyl-terminal protease 2448 64.35 +1 2968117..2969064 + 315 158522465 - Dole_2454 - protein of unknown function DUF610 YibQ 2449 60.62 0 2969565..2970473 - 302 158522466 - Dole_2455 - ribosomal protein L11 methyltransferase 2450 59.44 0 2970885..2971784 + 299 158522467 - Dole_2456 - hypothetical protein 2451 49.95 -1 2971868..2972884 - 338 158522468 - Dole_2457 - transposase IS4 family protein 2452 61.56 0 2973044..2977153 + 1369 158522469 - Dole_2458 - outer membrane autotransporter 2453 61.32 0 2977358..2978479 + 373 158522470 - Dole_2459 - hypothetical protein 2454 53.64 0 2978654..2979766 + 370 158522471 - Dole_2460 - hypothetical protein 2455 54.41 0 2979777..2981024 + 415 158522472 - Dole_2461 - radical SAM domain-containing protein 2456 50.75 0 2981067..2982737 + 556 158522473 - Dole_2462 - hypothetical protein 2457 58.12 0 2982820..2983767 - 315 158522474 - Dole_2463 - ribonuclease III 2458 56.92 0 2983782..2984786 - 334 158522475 - Dole_2464 - hypothetical protein 2459 57.93 0 2984965..2987139 + 724 158522476 - Dole_2465 - DegT/DnrJ/EryC1/StrS aminotransferase 2460 55.97 0 2987201..2990023 + 940 158522477 - Dole_2466 - hypothetical protein 2461 58.60 0 2990007..2990762 - 251 158522478 - Dole_2467 - glycosyl transferase family protein 2462 58.71 0 2991193..2992323 + 376 158522479 - Dole_2468 - hypothetical protein 2463 56.54 0 2992289..2993641 + 450 158522480 - Dole_2469 - hypothetical protein 2464 62.08 0 2993656..2995401 + 581 158522481 - Dole_2470 - TPR repeat-containing protein 2465 58.49 0 2995519..2997450 + 643 158522482 - Dole_2471 - TPR repeat-containing protein 2466 59.65 0 2997559..2999082 + 507 158522483 - Dole_2472 - radical SAM domain-containing protein 2467 56.57 0 2999088..3000494 - 468 158522484 - Dole_2473 - radical SAM domain-containing protein 2468 54.55 0 3001291..3002256 + 321 158522485 - Dole_2474 - RNA polymerase sigma 70 family subunit 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0