version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2347 62.91 +1 2838320..2838958 - 212 158522364 - Dole_2353 - hypothetical protein 2348 55.56 0 2838995..2839498 - 167 158522365 - Dole_2354 - hypothetical protein 2349 61.46 0 2839488..2840888 - 466 158522366 - Dole_2355 - RNA modification protein 2350 59.76 0 2840906..2841325 - 139 158522367 - Dole_2356 - hypothetical protein 2351 56.22 0 2841368..2841616 - 82 158522368 - Dole_2357 - hypothetical protein 2352 54.26 0 2841662..2842225 - 187 158522369 - Dole_2358 - translation elongation factor P 2353 60.28 0 2842309..2843091 - 260 158522370 - Dole_2359 - N-(5'phosphoribosyl)anthranilate isomerase (PRAI) 2354 61.50 0 2843103..2845136 - 677 158522371 - Dole_2360 - hypothetical protein 2355 57.32 0 2845120..2845932 - 270 158522372 - Dole_2361 - FkbM family methyltransferase 2356 56.47 0 2846026..2846976 + 316 158522373 - Dole_2362 - hypothetical protein 2357 54.30 0 2847020..2847763 - 247 158522374 - Dole_2363 - lipid-binding START domain-containing protein 2358 60.08 0 2847979..2849040 + 353 158522375 - Dole_2364 - CaCA family Na(+)/Ca(+) antiporter 2359 58.88 0 2849207..2849977 - 256 158522376 - Dole_2365 - enoyl-CoA hydratase/isomerase 2360 59.19 0 2850075..2851880 - 601 158522377 - Dole_2366 - acyl-CoA dehydrogenase domain-containing protein 2361 54.68 0 2851935..2852543 - 202 158522378 - Dole_2367 - TetR family transcriptional regulator 2362 61.45 0 2852753..2853748 - 331 158522379 - Dole_2368 - nuclease 2363 59.41 0 2853845..2854726 - 293 158522380 - Dole_2369 - phosphoribosylaminoimidazole-succinocarboxamide synthase 2364 57.65 0 2854754..2855119 - 121 158522381 - Dole_2370 - type IV pilus assembly PilZ 2365 55.76 0 2855136..2856299 - 387 158522382 - Dole_2371 - cyclic nucleotide-binding protein 2366 53.33 0 2856319..2856933 - 204 158522383 - Dole_2372 - gliding motility protein (MglA) 2367 53.97 0 2857055..2857936 - 293 158522384 - Dole_2373 - hypothetical protein 2368 61.32 0 2858496..2859431 + 311 158522385 - Dole_2374 - malate dehydrogenase, NAD-dependent 2369 62.89 +1 2859650..2861530 - 626 158522386 - Dole_2375 - excinuclease ABC, C subunit 2370 62.12 0 2861743..2863743 - 666 158522387 - Dole_2376 - excinuclease ABC subunit B 2371 62.84 +1 2863799..2864923 - 374 158522388 - Dole_2377 - hypothetical protein 2372 60.48 0 2864934..2866874 - 646 158522389 - Dole_2378 - hypothetical protein 2373 64.71 +1 2867073..2867480 + 135 158522390 - Dole_2379 - hypothetical protein 2374 58.64 0 2867502..2868734 - 410 158522391 - Dole_2380 - diguanylate cyclase 2375 57.71 0 2868796..2870727 - 643 158522392 - Dole_2381 - Na/Pi-cotransporter II-related protein 2376 58.79 0 2870747..2872675 - 642 158522393 - Dole_2382 - hypothetical protein 2377 56.33 0 2872703..2873176 - 157 158522394 - Dole_2383 - hypothetical protein 2378 59.92 0 2873566..2876187 + 873 158522395 - Dole_2384 - hypothetical protein 2379 55.13 0 2876169..2876402 + 77 158522396 - Dole_2385 - hypothetical protein 2380 58.20 0 2876441..2876818 + 125 158522397 - Dole_2386 - hypothetical protein 2381 58.75 0 2876992..2878380 - 462 158522398 - Dole_2387 - hypothetical protein 2382 53.26 0 2878373..2879782 - 469 158522399 - Dole_2388 - hypothetical protein 2383 58.82 0 2880113..2880775 + 220 158522400 - Dole_2389 - methyltransferase type 11 2384 55.74 0 2880779..2880961 + 60 158522401 - Dole_2390 - hypothetical protein 2385 57.14 0 2880958..2881923 + 321 158522402 - Dole_2391 - hypothetical protein 2386 57.19 0 2882031..2883539 - 502 158522403 - Dole_2392 - histidine kinase 2387 63.86 +1 2883670..2886129 - 819 158522404 - Dole_2393 - pyruvate, water dikinase 2388 55.12 0 2886165..2886545 - 126 158522405 - Dole_2394 - response regulator receiver protein 2389 60.49 0 2886577..2887548 - 323 158522406 - Dole_2395 - hypothetical protein 2390 62.14 0 2887597..2888016 - 139 158522407 - Dole_2396 - response regulator receiver protein 2391 59.78 0 2888109..2888921 - 270 158522408 - Dole_2397 - hypothetical protein 2392 60.66 0 2888956..2889771 - 271 158522409 - Dole_2398 - response regulator receiver protein 2393 62.12 0 2889799..2891625 - 608 158522410 - Dole_2399 - TrkA domain-containing protein 2394 58.61 0 2891688..2892134 - 148 158522411 - Dole_2400 - hypothetical protein 2395 63.19 +1 2892349..2893698 - 449 158522412 - Dole_2401 - two component, sigma54 specific, Fis family transcriptional regulator 2396 56.67 0 2893793..2894152 - 119 158522413 - Dole_2402 - hypothetical protein 2397 58.08 0 2894180..2894470 - 96 158522414 - Dole_2403 - GntR family transcriptional regulator 2398 59.06 0 2894699..2896000 + 433 158522415 - Dole_2404 - glucose-methanol-choline oxidoreductase 2399 58.37 0 2896051..2896797 - 248 158522416 - Dole_2405 - glycosyl transferase family protein 2400 62.01 0 2897208..2898344 + 378 158522417 - Dole_2406 - hypothetical protein 2401 55.93 0 2898358..2899773 - 471 158522418 - Dole_2407 - radical SAM domain-containing protein 2402 56.48 0 2899888..2901468 - 526 158522419 - Dole_2408 - hypothetical protein 2403 52.13 0 2901477..2902205 - 242 158522420 - Dole_2409 - peptidylprolyl isomerase FKBP-type 2404 54.44 0 2902320..2904266 + 648 158522421 - Dole_2410 - TPR repeat-containing protein 2405 54.18 0 2904263..2905792 + 509 158522422 - Dole_2411 - hypothetical protein 2406 55.22 0 2905789..2906478 + 229 158522423 - Dole_2412 - glycosyl transferase family protein 2407 54.10 0 2906556..2908337 - 593 158522424 - Dole_2413 - TPR repeat-containing protein 2408 60.34 0 2908334..2910103 - 589 158522425 - Dole_2414 - TPR repeat-containing protein 2409 57.79 0 2910233..2912293 - 686 158522426 - Dole_2415 - TPR repeat-containing protein 2410 57.80 0 2912298..2913707 - 469 158522427 - Dole_2416 - radical SAM domain-containing protein 2411 57.54 0 2913887..2916175 + 762 158522428 - Dole_2417 - TPR repeat-containing protein 2412 57.65 0 2916172..2918655 + 827 158522429 - Dole_2418 - TPR repeat-containing protein 2413 58.22 0 2918652..2921030 + 792 158522430 - Dole_2419 - TPR repeat-containing protein 2414 59.43 0 2921534..2922058 + 174 158522431 - Dole_2420 - hypothetical protein 2415 60.28 0 2922174..2922956 + 260 158522432 - Dole_2421 - hypothetical protein 2416 53.31 0 2923243..2923998 + 251 158522433 - Dole_2422 - peptidase C39 bacteriocin processing 2417 59.74 0 2924015..2926063 + 682 158522434 - Dole_2423 - SH3 type 3 domain-containing protein 2418 58.86 0 2926088..2927830 + 580 158522435 - Dole_2424 - membrane protein involved in aromatic hydrocarbon degradation 2419 55.48 0 2928028..2929698 + 556 158522436 - Dole_2425 - hypothetical protein 2420 62.55 +1 2929790..2930566 - 258 158522437 - Dole_2426 - ribulose-1,5-biphosphate synthetase 2421 65.03 +1 2930646..2931926 - 426 158522438 - Dole_2427 - thiamine biosynthesis protein ThiC 2422 56.35 0 2932473..2933906 + 477 158522439 - Dole_2428 - radical SAM domain-containing protein 2423 61.17 0 2934001..2935455 + 484 158522440 - Dole_2429 - hypothetical protein 2424 62.65 +1 2935439..2937553 + 704 158522441 - Dole_2430 - spermine synthase 2425 61.29 0 2937531..2938721 + 396 158522442 - Dole_2431 - radical SAM domain-containing protein 2426 57.59 0 2938865..2940472 + 535 158522443 - Dole_2432 - radical SAM domain-containing protein 2427 58.58 0 2940502..2942010 - 502 158522444 - Dole_2433 - radical SAM domain-containing protein 2428 58.48 0 2942007..2943569 - 520 158522445 - Dole_2434 - radical SAM domain-containing protein 2429 54.16 0 2943570..2945144 - 524 158522446 - Dole_2435 - radical SAM domain-containing protein 2430 55.81 0 2945429..2945695 + 88 158522447 - Dole_2436 - ribosomal protein S20 2431 61.99 0 2945760..2946293 - 177 158522448 - Dole_2437 - hypothetical protein 2432 60.85 0 2946608..2949205 - 865 158522449 - Dole_2438 - leucyl-tRNA synthetase 2433 60.13 0 2949534..2951033 + 499 158522450 - Dole_2439 - ribonuclease 2434 57.98 0 2951123..2951905 + 260 158522451 - Dole_2440 - hypothetical protein 2435 55.10 0 2951999..2952292 + 97 158522452 - Dole_2441 - preprotein translocase, YajC subunit 2436 60.89 0 2952318..2953892 + 524 158522453 - Dole_2442 - protein-export membrane protein SecD 2437 56.42 0 2953917..2954960 + 347 158522454 - Dole_2443 - preprotein translocase subunit SecF 2438 63.42 +1 2955310..2956479 + 389 158522455 - Dole_2444 - DNA protecting protein DprA 2439 58.37 0 2956710..2958986 + 758 158522456 - Dole_2445 - DNA topoisomerase I 2440 59.44 0 2959008..2960819 + 603 158522457 - Dole_2446 - chloride channel core 2441 56.59 0 2961314..2962543 + 409 158522458 - Dole_2447 - diguanylate cyclase with PAS/PAC sensor 2442 60.18 0 2962653..2962991 - 112 158522459 - Dole_2448 - histidine triad (HIT) protein 2443 55.76 0 2963033..2963518 + 161 158522460 - Dole_2449 - hypothetical protein 2444 62.13 0 2963759..2964442 + 227 158522461 - Dole_2450 - cell division ATP-binding protein FtsE 2445 57.48 0 2964439..2965320 + 293 158522462 - Dole_2451 - hypothetical protein 2446 59.32 0 2965383..2966675 + 430 158522463 - Dole_2452 - peptidase M23B 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0