version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2309 53.30 0 2801764..2803140 + 458 158522326 - Dole_2315 - diguanylate cyclase with PAS/PAC sensor 2310 44.44 -2 2803507..2803686 + 59 158522327 - Dole_2316 - CsbD family protein 2311 53.07 0 2803700..2803927 + 75 158522328 - Dole_2317 - hypothetical protein 2312 53.15 0 2803972..2804193 + 73 158522329 - Dole_2318 - hypothetical protein 2313 45.69 -1 2804289..2804636 + 115 158522330 - Dole_2319 - antibiotic biosynthesis monooxygenase 2314 43.59 -2 2805177..2805488 + 103 158522331 - Dole_2320 - hypothetical protein 2315 50.68 0 2805504..2805797 - 97 158522332 - Dole_2321 - FHA domain-containing protein 2316 57.87 0 2805913..2806344 - 143 158522333 - Dole_2322 - amino acid-binding ACT domain-containing protein 2317 60.60 0 2806380..2807681 - 433 158522334 - Dole_2323 - phenylacetate--CoA ligase 2318 56.65 0 2807965..2808972 - 335 158522335 - Dole_2324 - NAD-dependent epimerase/dehydratase 2319 54.29 0 2809063..2809377 - 104 158522336 - Dole_2325 - hypothetical protein 2320 52.52 0 2809367..2809684 - 105 158522337 - Dole_2326 - septum formation initiator 2321 61.81 0 2809662..2811248 - 528 158522338 - Dole_2327 - integral membrane protein MviN 2322 54.95 0 2811433..2812875 - 480 158522339 - Dole_2328 - phospholipase D/transphosphatidylase 2323 59.71 0 2812885..2813631 - 248 158522340 - Dole_2329 - endonuclease/exonuclease/phosphatase 2324 56.20 0 2813657..2814535 - 292 158522341 - Dole_2330 - methylenetetrahydrofolate reductase (NAD(P)H) 2325 56.41 0 2814850..2815278 - 142 158522342 - Dole_2331 - response regulator receiver protein 2326 59.64 0 2815341..2816009 - 222 158522343 - Dole_2332 - histidine kinase A domain-containing protein 2327 56.78 0 2816021..2816374 - 117 158522344 - Dole_2333 - response regulator receiver protein 2328 56.92 0 2816371..2818134 - 587 158522345 - Dole_2334 - histidine kinase 2329 59.79 0 2818172..2819407 - 411 158522346 - Dole_2335 - response regulator receiver protein 2330 59.90 0 2819441..2821552 - 703 158522347 - Dole_2336 - sulfate transporter 2331 52.43 0 2821753..2822328 - 191 158522348 - Dole_2337 - TetR family transcriptional regulator 2332 59.57 0 2822594..2823199 + 201 158522349 - Dole_2338 - CBS domain-containing protein 2333 57.88 0 2823196..2824617 + 473 158522350 - Dole_2339 - hexapaptide repeat-containing transferase 2334 37.28 -2 2825044..2825601 + 185 158522351 - Dole_2340 - hypothetical protein 2335 58.26 0 2825704..2826036 + 110 158522352 - Dole_2341 - phosphoribosylaminoimidazole carboxylase ATPase subunit 2336 54.27 0 2826090..2826323 + 77 158522353 - Dole_2342 - CopG/DNA-binding domain-containing protein 2337 54.73 0 2826308..2826709 + 133 158522354 - Dole_2343 - PilT domain-containing protein 2338 63.27 +1 2826697..2826843 - 48 158522355 - Dole_2344 - hypothetical protein 2339 41.36 -2 2827232..2827879 + 215 158522356 - Dole_2345 - hypothetical protein 2340 43.07 -2 2827869..2830457 + 862 158522357 - Dole_2346 - hypothetical protein 2341 56.92 0 2830606..2830923 + 105 158522358 - Dole_2347 - phosphoribosylaminoimidazole carboxylase ATPase subunit 2342 61.32 0 2830942..2833110 - 722 158522359 - Dole_2348 - RecD/TraA family helicase 2343 60.49 0 2833282..2834559 - 425 158522360 - Dole_2349 - DEAD/DEAH box helicase domain-containing protein 2344 60.28 0 2835249..2835812 - 187 158522361 - Dole_2350 - hypothetical protein 2345 64.17 +1 2836032..2836793 + 253 158522362 - Dole_2351 - histidine biosynthesis protein 2346 62.03 0 2836808..2838295 + 495 158522363 - Dole_2352 - FAD dependent oxidoreductase 2347 62.91 +1 2838320..2838958 - 212 158522364 - Dole_2353 - hypothetical protein 2348 55.56 0 2838995..2839498 - 167 158522365 - Dole_2354 - hypothetical protein 2349 61.46 0 2839488..2840888 - 466 158522366 - Dole_2355 - RNA modification protein 2350 59.76 0 2840906..2841325 - 139 158522367 - Dole_2356 - hypothetical protein 2351 56.22 0 2841368..2841616 - 82 158522368 - Dole_2357 - hypothetical protein 2352 54.26 0 2841662..2842225 - 187 158522369 - Dole_2358 - translation elongation factor P 2353 60.28 0 2842309..2843091 - 260 158522370 - Dole_2359 - N-(5'phosphoribosyl)anthranilate isomerase (PRAI) 2354 61.50 0 2843103..2845136 - 677 158522371 - Dole_2360 - hypothetical protein 2355 57.32 0 2845120..2845932 - 270 158522372 - Dole_2361 - FkbM family methyltransferase 2356 56.47 0 2846026..2846976 + 316 158522373 - Dole_2362 - hypothetical protein 2357 54.30 0 2847020..2847763 - 247 158522374 - Dole_2363 - lipid-binding START domain-containing protein 2358 60.08 0 2847979..2849040 + 353 158522375 - Dole_2364 - CaCA family Na(+)/Ca(+) antiporter 2359 58.88 0 2849207..2849977 - 256 158522376 - Dole_2365 - enoyl-CoA hydratase/isomerase 2360 59.19 0 2850075..2851880 - 601 158522377 - Dole_2366 - acyl-CoA dehydrogenase domain-containing protein 2361 54.68 0 2851935..2852543 - 202 158522378 - Dole_2367 - TetR family transcriptional regulator 2362 61.45 0 2852753..2853748 - 331 158522379 - Dole_2368 - nuclease 2363 59.41 0 2853845..2854726 - 293 158522380 - Dole_2369 - phosphoribosylaminoimidazole-succinocarboxamide synthase 2364 57.65 0 2854754..2855119 - 121 158522381 - Dole_2370 - type IV pilus assembly PilZ 2365 55.76 0 2855136..2856299 - 387 158522382 - Dole_2371 - cyclic nucleotide-binding protein 2366 53.33 0 2856319..2856933 - 204 158522383 - Dole_2372 - gliding motility protein (MglA) 2367 53.97 0 2857055..2857936 - 293 158522384 - Dole_2373 - hypothetical protein 2368 61.32 0 2858496..2859431 + 311 158522385 - Dole_2374 - malate dehydrogenase, NAD-dependent 2369 62.89 +1 2859650..2861530 - 626 158522386 - Dole_2375 - excinuclease ABC, C subunit 2370 62.12 0 2861743..2863743 - 666 158522387 - Dole_2376 - excinuclease ABC subunit B 2371 62.84 +1 2863799..2864923 - 374 158522388 - Dole_2377 - hypothetical protein 2372 60.48 0 2864934..2866874 - 646 158522389 - Dole_2378 - hypothetical protein 2373 64.71 +1 2867073..2867480 + 135 158522390 - Dole_2379 - hypothetical protein 2374 58.64 0 2867502..2868734 - 410 158522391 - Dole_2380 - diguanylate cyclase 2375 57.71 0 2868796..2870727 - 643 158522392 - Dole_2381 - Na/Pi-cotransporter II-related protein 2376 58.79 0 2870747..2872675 - 642 158522393 - Dole_2382 - hypothetical protein 2377 56.33 0 2872703..2873176 - 157 158522394 - Dole_2383 - hypothetical protein 2378 59.92 0 2873566..2876187 + 873 158522395 - Dole_2384 - hypothetical protein 2379 55.13 0 2876169..2876402 + 77 158522396 - Dole_2385 - hypothetical protein 2380 58.20 0 2876441..2876818 + 125 158522397 - Dole_2386 - hypothetical protein 2381 58.75 0 2876992..2878380 - 462 158522398 - Dole_2387 - hypothetical protein 2382 53.26 0 2878373..2879782 - 469 158522399 - Dole_2388 - hypothetical protein 2383 58.82 0 2880113..2880775 + 220 158522400 - Dole_2389 - methyltransferase type 11 2384 55.74 0 2880779..2880961 + 60 158522401 - Dole_2390 - hypothetical protein 2385 57.14 0 2880958..2881923 + 321 158522402 - Dole_2391 - hypothetical protein 2386 57.19 0 2882031..2883539 - 502 158522403 - Dole_2392 - histidine kinase 2387 63.86 +1 2883670..2886129 - 819 158522404 - Dole_2393 - pyruvate, water dikinase 2388 55.12 0 2886165..2886545 - 126 158522405 - Dole_2394 - response regulator receiver protein 2389 60.49 0 2886577..2887548 - 323 158522406 - Dole_2395 - hypothetical protein 2390 62.14 0 2887597..2888016 - 139 158522407 - Dole_2396 - response regulator receiver protein 2391 59.78 0 2888109..2888921 - 270 158522408 - Dole_2397 - hypothetical protein 2392 60.66 0 2888956..2889771 - 271 158522409 - Dole_2398 - response regulator receiver protein 2393 62.12 0 2889799..2891625 - 608 158522410 - Dole_2399 - TrkA domain-containing protein 2394 58.61 0 2891688..2892134 - 148 158522411 - Dole_2400 - hypothetical protein 2395 63.19 +1 2892349..2893698 - 449 158522412 - Dole_2401 - two component, sigma54 specific, Fis family transcriptional regulator 2396 56.67 0 2893793..2894152 - 119 158522413 - Dole_2402 - hypothetical protein 2397 58.08 0 2894180..2894470 - 96 158522414 - Dole_2403 - GntR family transcriptional regulator 2398 59.06 0 2894699..2896000 + 433 158522415 - Dole_2404 - glucose-methanol-choline oxidoreductase 2399 58.37 0 2896051..2896797 - 248 158522416 - Dole_2405 - glycosyl transferase family protein 2400 62.01 0 2897208..2898344 + 378 158522417 - Dole_2406 - hypothetical protein 2401 55.93 0 2898358..2899773 - 471 158522418 - Dole_2407 - radical SAM domain-containing protein 2402 56.48 0 2899888..2901468 - 526 158522419 - Dole_2408 - hypothetical protein 2403 52.13 0 2901477..2902205 - 242 158522420 - Dole_2409 - peptidylprolyl isomerase FKBP-type 2404 54.44 0 2902320..2904266 + 648 158522421 - Dole_2410 - TPR repeat-containing protein 2405 54.18 0 2904263..2905792 + 509 158522422 - Dole_2411 - hypothetical protein 2406 55.22 0 2905789..2906478 + 229 158522423 - Dole_2412 - glycosyl transferase family protein 2407 54.10 0 2906556..2908337 - 593 158522424 - Dole_2413 - TPR repeat-containing protein 2408 60.34 0 2908334..2910103 - 589 158522425 - Dole_2414 - TPR repeat-containing protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0