version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2124 57.24 0 2586193..2586807 - 204 158522141 - Dole_2130 - hypothetical protein 2125 58.37 0 2587140..2587766 - 208 158522142 - Dole_2131 - hypothetical protein 2126 58.40 0 2587981..2588718 - 245 158522143 - Dole_2132 - ABC transporter-related protein 2127 61.45 0 2588693..2590072 - 459 158522144 - Dole_2133 - recombination factor protein RarA 2128 57.59 0 2590181..2591557 - 458 158522145 - Dole_2134 - small GTP-binding protein 2129 61.89 0 2591744..2593000 - 418 158522146 - Dole_2135 - diaminopimelate decarboxylase 2130 55.70 0 2593168..2593641 + 157 158522147 - Dole_2136 - GCN5-related N-acetyltransferase 2131 63.95 +1 2593645..2594526 + 293 158522148 - Dole_2137 - hypothetical protein 2132 56.73 0 2594549..2595172 - 207 158522149 - Dole_2138 - hypothetical protein 2133 58.96 0 2595460..2598495 + 1011 158522150 - Dole_2139 - hypothetical protein 2134 54.99 0 2598580..2600394 + 604 158522151 - Dole_2140 - radical SAM domain-containing protein 2135 62.21 0 2600421..2601026 - 201 158522152 - Dole_2141 - cation efflux protein 2136 62.25 0 2601043..2601699 - 218 158522153 - Dole_2142 - metallophosphoesterase 2137 61.69 0 2601748..2603013 - 421 158522154 - Dole_2143 - NADH:flavin oxidoreductase/NADH oxidase 2138 58.11 0 2603032..2603475 - 147 158522155 - Dole_2144 - pyridoxamine 5'-phosphate oxidase-related FMN-binding 2139 65.23 +1 2603603..2604088 + 161 158522156 - Dole_2145 - Rossmann fold nucleotide-binding protein 2140 55.78 0 2604124..2605326 - 400 158522157 - Dole_2146 - hypothetical protein 2141 65.07 +1 2605570..2606256 - 228 158522158 - Dole_2147 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2142 53.78 0 2606328..2607638 - 436 158522159 - Dole_2148 - hypothetical protein 2143 55.74 0 2608097..2608828 - 243 158522160 - Dole_2149 - hypothetical protein 2144 62.92 +1 2608856..2609977 - 373 158522161 - Dole_2150 - hypothetical protein 2145 57.33 0 2610400..2612616 - 738 158522162 - Dole_2151 - RpoD family RNA polymerase sigma factor 2146 58.06 0 2612648..2613007 - 119 158522163 - Dole_2152 - putative histone H1-like protein 2147 57.27 0 2613004..2614845 - 613 158522164 - Dole_2153 - DNA primase 2148 61.90 0 2614848..2615603 - 251 158522165 - Dole_2154 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 2149 55.10 0 2615621..2616208 - 195 158522166 - Dole_2155 - imidazoleglycerol-phosphate dehydratase 2150 45.05 -1 2616406..2616678 - 90 158522167 - Dole_2156 - hypothetical protein 2151 58.45 0 2616755..2617873 + 372 158522168 - Dole_2157 - diguanylate cyclase 2152 62.65 +1 2617892..2618788 - 298 158522169 - Dole_2158 - LysR family transcriptional regulator 2153 58.42 0 2618915..2619508 + 197 158522170 - Dole_2159 - SirA family protein 2154 61.32 0 2619688..2620941 + 417 158522171 - Dole_2160 - acetyl-CoA acetyltransferase 2155 54.90 0 2621259..2621513 + 84 158522172 - Dole_2161 - peroxiredoxin-like protein 2156 57.89 0 2621583..2621981 + 132 158522173 - Dole_2162 - alkyl hydroperoxide reductase 2157 53.48 0 2622124..2622669 + 181 158522174 - Dole_2163 - putative membrane protein with signal peptide 2158 57.92 0 2622866..2624683 - 605 158522175 - Dole_2164 - acyl-CoA dehydrogenase domain-containing protein 2159 56.39 0 2625048..2626049 + 333 158522176 - Dole_2165 - diguanylate cyclase 2160 58.37 0 2626080..2626742 + 220 158522177 - Dole_2166 - DNA-(apurinic or apyrimidinic site) lyase 2161 58.84 0 2626757..2628085 + 442 158522178 - Dole_2167 - UDP-glucose/GDP-mannose dehydrogenase 2162 59.11 0 2628146..2628820 + 224 158522179 - Dole_2168 - nitroreductase 2163 59.01 0 2628828..2629598 + 256 158522180 - Dole_2169 - hypothetical protein 2164 59.45 0 2629705..2630577 + 290 158522181 - Dole_2170 - hypothetical protein 2165 51.12 0 2630753..2636392 - 1879 158522182 - Dole_2171 - hypothetical protein 2166 44.23 -2 2637053..2638006 - 317 158522183 - Dole_2172 - hypothetical protein 2167 53.58 0 2638218..2639027 - 269 158522184 - Dole_2173 - LuxR family transcriptional regulator 2168 57.68 0 2639570..2640994 + 474 158522185 - Dole_2174 - response regulator receiver modulated metal dependent phosphohydrolase 2169 58.75 0 2641546..2642202 - 218 158522186 - Dole_2175 - TetR family transcriptional regulator 2170 62.14 0 2642259..2644049 - 596 158522187 - Dole_2176 - hypothetical protein 2171 59.90 0 2644053..2644820 - 255 158522188 - Dole_2177 - enoyl-CoA hydratase/isomerase 2172 60.38 0 2644836..2645360 - 174 158522189 - Dole_2178 - biotin/lipoyl attachment domain-containing protein 2173 61.00 0 2645555..2647054 - 499 158522190 - Dole_2179 - carbamoyl-phosphate synthase L chain ATP-binding 2174 61.35 0 2647237..2648853 - 538 158522191 - Dole_2180 - propionyl-CoA carboxylase 2175 61.56 0 2649066..2650181 - 371 158522192 - Dole_2181 - acyl-CoA dehydrogenase domain-containing protein 2176 59.32 0 2650214..2651356 - 380 158522193 - Dole_2182 - acyl-CoA dehydrogenase domain-containing protein 2177 56.94 0 2651774..2652277 - 167 158522194 - Dole_2183 - rubrerythrin 2178 56.63 0 2652520..2653137 + 205 158522195 - Dole_2184 - dephospho-CoA kinase 2179 58.18 0 2653191..2654474 + 427 158522196 - Dole_2185 - lytic transglycosylase catalytic 2180 60.12 0 2654753..2655943 - 396 158522197 - Dole_2186 - peptidase M24 2181 61.83 0 2656266..2657444 - 392 158522198 - Dole_2187 - acetyl-CoA acetyltransferase 2182 59.58 0 2657588..2660848 - 1086 158522199 - Dole_2188 - methylmalonyl-CoA mutase, large subunit 2183 56.80 0 2660852..2661520 - 222 158522200 - Dole_2189 - TetR family transcriptional regulator 2184 54.02 0 2661930..2662601 + 223 158522201 - Dole_2190 - TetR family transcriptional regulator 2185 58.91 0 2662702..2665665 + 987 158522202 - Dole_2191 - formate C-acetyltransferase 2186 54.87 0 2665849..2666772 + 307 158522203 - Dole_2192 - glycyl-radical activating family protein 2187 60.93 0 2666832..2667842 + 336 158522204 - Dole_2193 - NAD-dependent epimerase/dehydratase 2188 59.55 0 2668160..2669002 + 280 158522205 - Dole_2194 - short-chain dehydrogenase/reductase SDR 2189 60.04 0 2669013..2670023 - 336 158522206 - Dole_2195 - glyceraldehyde 3-phosphate dehydrogenase 2190 55.24 0 2670203..2670736 + 177 158522207 - Dole_2196 - hypothetical protein 2191 60.96 0 2670739..2671632 - 297 158522208 - Dole_2197 - methionine aminopeptidase, type I 2192 57.28 0 2671820..2672224 + 134 158522209 - Dole_2198 - GTP cyclohydrolase I 2193 56.15 0 2672264..2673337 + 357 158522210 - Dole_2199 - cyclic nucleotide-binding protein 2194 54.21 0 2673410..2673730 - 106 158522211 - Dole_2200 - hypothetical protein 2195 64.24 +1 2673793..2674122 - 109 158522212 - Dole_2201 - hypothetical protein 2196 57.23 0 2674115..2675968 - 617 158522213 - Dole_2202 - hypothetical protein 2197 60.29 0 2676007..2676822 - 271 158522214 - Dole_2203 - hypothetical protein 2198 55.46 0 2676843..2678243 - 466 158522215 - Dole_2204 - hypothetical protein 2199 60.08 0 2678231..2679262 - 343 158522216 - Dole_2205 - Holliday junction DNA helicase B 2200 61.00 0 2679259..2679876 - 205 158522217 - Dole_2206 - DNA recombination protein RuvA 2201 55.35 0 2679860..2680345 - 161 158522218 - Dole_2207 - crossover junction endodeoxyribonuclease 2202 57.85 0 2680397..2681224 - 275 158522219 - Dole_2208 - Tol-Pal system YbgF 2203 57.33 0 2681374..2681919 - 181 158522220 - Dole_2209 - peptidoglycan-associated lipoprotein 2204 59.61 0 2681946..2683262 - 438 158522221 - Dole_2210 - beta-propeller repeat-containing to-pal system protein TolB 2205 61.09 0 2683291..2684115 - 274 158522222 - Dole_2211 - TonB family protein 2206 58.39 0 2684159..2684581 - 140 158522223 - Dole_2212 - biopolymer transport TolR 2207 57.95 0 2684578..2685300 - 240 158522224 - Dole_2213 - Tol-Pal system TolQ 2208 55.99 0 2685615..2687543 - 642 158522225 - Dole_2214 - heat shock protein 90 2209 62.70 +1 2687919..2689103 - 394 158522226 - Dole_2215 - hypothetical protein 2210 60.96 0 2689113..2690252 - 379 158522227 - Dole_2216 - peptidase T-like protein 2211 55.70 0 2690624..2691298 + 224 158522228 - Dole_2217 - phosphatidylserine decarboxylase 2212 58.57 0 2691295..2692134 + 279 158522229 - Dole_2218 - CDP-diacylglycerol--serine O-phosphatidyltransferase 2213 59.46 0 2692232..2693299 + 355 158522230 - Dole_2219 - 3-isopropylmalate dehydrogenase 2214 57.67 0 2693320..2694342 + 340 158522231 - Dole_2220 - aspartate-semialdehyde dehydrogenase 2215 58.38 0 2694378..2694872 + 164 158522232 - Dole_2221 - transcription elongation factor GreA 2216 60.66 0 2694905..2695270 + 121 158522233 - Dole_2222 - DNA-directed RNA polymerase, omega subunit 2217 57.61 0 2695227..2696021 + 264 158522234 - Dole_2223 - PP-loop domain-containing protein 2218 55.04 0 2696128..2696910 + 260 158522235 - Dole_2224 - hypothetical protein 2219 59.25 0 2696900..2698207 - 435 158522236 - Dole_2225 - peptidase S13 D-Ala-D-Ala carboxypeptidase C 2220 61.34 0 2698194..2699621 - 475 158522237 - Dole_2226 - putative aminopeptidase 1 2221 60.09 0 2699805..2700245 - 146 158522238 - Dole_2227 - D-tyrosyl-tRNA(Tyr) deacylase 2222 59.56 0 2700331..2700780 - 149 158522239 - Dole_2228 - 3-dehydroquinate dehydratase, type II 2223 62.42 +1 2700789..2701448 - 219 158522240 - Dole_2229 - ribulose-phosphate 3-epimerase 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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