version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2079 60.87 0 2534925..2535062 - 45 158522096 - Dole_2085 - ribosomal protein L32 2080 61.14 0 2535280..2535840 - 186 158522097 - Dole_2086 - hypothetical protein 2081 59.37 0 2535879..2537207 - 442 158522098 - Dole_2087 - hypothetical protein 2082 43.04 -2 2537460..2538602 - 380 158522099 - Dole_2088 - hypothetical protein 2083 45.07 -1 2538615..2539040 - 141 158522100 - Dole_2089 - hypothetical protein 2084 46.29 -1 2539037..2540209 - 390 158522101 - Dole_2090 - hypothetical protein 2085 41.40 -2 2540420..2541250 + 276 158522102 - Dole_2091 - hypothetical protein 2086 58.33 0 2541255..2541926 - 223 158522103 - Dole_2092 - DNA repair protein RadC 2087 44.07 -2 2542111..2543544 - 477 158522104 - Dole_2093 - restriction modification system DNA specificity subunit 2088 51.80 0 2543541..2544569 - 342 158522105 - Dole_2094 - hypothetical protein 2089 56.50 0 2544566..2546011 - 481 158522106 - Dole_2095 - N-6 DNA methylase 2090 51.87 0 2546043..2548712 - 889 158522107 - Dole_2096 - type III restriction protein res subunit 2091 44.18 -2 2548855..2549721 - 288 158522108 - Dole_2097 - UbiA prenyltransferase 2092 58.30 0 2550118..2550834 + 238 158522109 - Dole_2098 - sugar fermentation stimulation protein 2093 53.95 0 2550896..2551249 + 117 158522110 - Dole_2099 - hypothetical protein 2094 56.21 0 2551255..2551914 - 219 158522111 - Dole_2100 - hypothetical protein 2095 60.21 0 2552019..2553908 - 629 158522112 - Dole_2101 - aldehyde ferredoxin oxidoreductase 2096 58.88 0 2553966..2554646 - 226 158522113 - Dole_2102 - Crp/FNR family transcriptional regulator 2097 59.05 0 2555051..2555785 + 244 158522114 - Dole_2103 - metal dependent phosphohydrolase 2098 60.82 0 2555801..2556553 + 250 158522115 - Dole_2104 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2099 59.93 0 2556736..2558502 - 588 158522116 - Dole_2105 - PAS modulated sigma54 specific transcriptional regulator 2100 63.01 +1 2558731..2560452 + 573 158522117 - Dole_2106 - single-stranded-DNA-specific exonuclease RecJ 2101 53.81 0 2560626..2561045 + 139 158522118 - Dole_2107 - hypothetical protein 2102 58.48 0 2561118..2562119 + 333 158522119 - Dole_2108 - ribonuclease Z 2103 59.66 0 2562116..2562643 + 175 158522120 - Dole_2109 - putative PTS IIA-like nitrogen-regulatory protein PtsN 2104 59.86 0 2562757..2563755 + 332 158522121 - Dole_2110 - KpsF/GutQ family protein 2105 57.98 0 2563963..2565297 + 444 158522122 - Dole_2111 - diphosphate--fructose-6-phosphate 1-phosphotransferase 2106 60.15 0 2565323..2565721 + 132 158522123 - Dole_2112 - hypothetical protein 2107 57.19 0 2566289..2567692 + 467 158522124 - Dole_2113 - amidophosphoribosyltransferase 2108 51.72 0 2567849..2568457 + 202 158522125 - Dole_2114 - hypothetical protein 2109 59.16 0 2568459..2570309 - 616 158522126 - Dole_2115 - UvrD/REP helicase 2110 54.95 0 2570684..2571016 + 110 158522127 - Dole_2116 - hypothetical protein 2111 62.24 0 2571066..2572307 + 413 158522128 - Dole_2117 - Na+ dependent nucleoside transporter 2112 59.17 0 2572650..2574491 - 613 158522129 - Dole_2118 - AMP-dependent synthetase and ligase 2113 47.81 -1 2574519..2574815 - 98 158522130 - Dole_2119 - plasmid stabilization system protein 2114 49.29 -1 2574812..2575093 - 93 158522131 - Dole_2120 - prevent-host-death family protein 2115 59.84 0 2575505..2576485 + 326 158522132 - Dole_2121 - radical SAM domain-containing protein 2116 60.31 0 2576789..2578267 + 492 158522133 - Dole_2122 - 30S ribosomal protein S1 2117 56.88 0 2578326..2578805 + 159 158522134 - Dole_2123 - CBS domain-containing protein 2118 62.11 0 2578812..2580368 - 518 158522135 - Dole_2124 - hypothetical protein 2119 63.12 +1 2580507..2581943 + 478 158522136 - Dole_2125 - pyruvate kinase 2120 52.14 0 2582022..2582441 - 139 158522137 - Dole_2126 - response regulator receiver protein 2121 54.20 0 2582680..2584131 - 483 158522138 - Dole_2127 - histidine kinase 2122 60.48 0 2584314..2585639 - 441 158522139 - Dole_2128 - hypothetical protein 2123 56.90 0 2585669..2586190 - 173 158522140 - Dole_2129 - hypothetical protein 2124 57.24 0 2586193..2586807 - 204 158522141 - Dole_2130 - hypothetical protein 2125 58.37 0 2587140..2587766 - 208 158522142 - Dole_2131 - hypothetical protein 2126 58.40 0 2587981..2588718 - 245 158522143 - Dole_2132 - ABC transporter-related protein 2127 61.45 0 2588693..2590072 - 459 158522144 - Dole_2133 - recombination factor protein RarA 2128 57.59 0 2590181..2591557 - 458 158522145 - Dole_2134 - small GTP-binding protein 2129 61.89 0 2591744..2593000 - 418 158522146 - Dole_2135 - diaminopimelate decarboxylase 2130 55.70 0 2593168..2593641 + 157 158522147 - Dole_2136 - GCN5-related N-acetyltransferase 2131 63.95 +1 2593645..2594526 + 293 158522148 - Dole_2137 - hypothetical protein 2132 56.73 0 2594549..2595172 - 207 158522149 - Dole_2138 - hypothetical protein 2133 58.96 0 2595460..2598495 + 1011 158522150 - Dole_2139 - hypothetical protein 2134 54.99 0 2598580..2600394 + 604 158522151 - Dole_2140 - radical SAM domain-containing protein 2135 62.21 0 2600421..2601026 - 201 158522152 - Dole_2141 - cation efflux protein 2136 62.25 0 2601043..2601699 - 218 158522153 - Dole_2142 - metallophosphoesterase 2137 61.69 0 2601748..2603013 - 421 158522154 - Dole_2143 - NADH:flavin oxidoreductase/NADH oxidase 2138 58.11 0 2603032..2603475 - 147 158522155 - Dole_2144 - pyridoxamine 5'-phosphate oxidase-related FMN-binding 2139 65.23 +1 2603603..2604088 + 161 158522156 - Dole_2145 - Rossmann fold nucleotide-binding protein 2140 55.78 0 2604124..2605326 - 400 158522157 - Dole_2146 - hypothetical protein 2141 65.07 +1 2605570..2606256 - 228 158522158 - Dole_2147 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2142 53.78 0 2606328..2607638 - 436 158522159 - Dole_2148 - hypothetical protein 2143 55.74 0 2608097..2608828 - 243 158522160 - Dole_2149 - hypothetical protein 2144 62.92 +1 2608856..2609977 - 373 158522161 - Dole_2150 - hypothetical protein 2145 57.33 0 2610400..2612616 - 738 158522162 - Dole_2151 - RpoD family RNA polymerase sigma factor 2146 58.06 0 2612648..2613007 - 119 158522163 - Dole_2152 - putative histone H1-like protein 2147 57.27 0 2613004..2614845 - 613 158522164 - Dole_2153 - DNA primase 2148 61.90 0 2614848..2615603 - 251 158522165 - Dole_2154 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 2149 55.10 0 2615621..2616208 - 195 158522166 - Dole_2155 - imidazoleglycerol-phosphate dehydratase 2150 45.05 -1 2616406..2616678 - 90 158522167 - Dole_2156 - hypothetical protein 2151 58.45 0 2616755..2617873 + 372 158522168 - Dole_2157 - diguanylate cyclase 2152 62.65 +1 2617892..2618788 - 298 158522169 - Dole_2158 - LysR family transcriptional regulator 2153 58.42 0 2618915..2619508 + 197 158522170 - Dole_2159 - SirA family protein 2154 61.32 0 2619688..2620941 + 417 158522171 - Dole_2160 - acetyl-CoA acetyltransferase 2155 54.90 0 2621259..2621513 + 84 158522172 - Dole_2161 - peroxiredoxin-like protein 2156 57.89 0 2621583..2621981 + 132 158522173 - Dole_2162 - alkyl hydroperoxide reductase 2157 53.48 0 2622124..2622669 + 181 158522174 - Dole_2163 - putative membrane protein with signal peptide 2158 57.92 0 2622866..2624683 - 605 158522175 - Dole_2164 - acyl-CoA dehydrogenase domain-containing protein 2159 56.39 0 2625048..2626049 + 333 158522176 - Dole_2165 - diguanylate cyclase 2160 58.37 0 2626080..2626742 + 220 158522177 - Dole_2166 - DNA-(apurinic or apyrimidinic site) lyase 2161 58.84 0 2626757..2628085 + 442 158522178 - Dole_2167 - UDP-glucose/GDP-mannose dehydrogenase 2162 59.11 0 2628146..2628820 + 224 158522179 - Dole_2168 - nitroreductase 2163 59.01 0 2628828..2629598 + 256 158522180 - Dole_2169 - hypothetical protein 2164 59.45 0 2629705..2630577 + 290 158522181 - Dole_2170 - hypothetical protein 2165 51.12 0 2630753..2636392 - 1879 158522182 - Dole_2171 - hypothetical protein 2166 44.23 -2 2637053..2638006 - 317 158522183 - Dole_2172 - hypothetical protein 2167 53.58 0 2638218..2639027 - 269 158522184 - Dole_2173 - LuxR family transcriptional regulator 2168 57.68 0 2639570..2640994 + 474 158522185 - Dole_2174 - response regulator receiver modulated metal dependent phosphohydrolase 2169 58.75 0 2641546..2642202 - 218 158522186 - Dole_2175 - TetR family transcriptional regulator 2170 62.14 0 2642259..2644049 - 596 158522187 - Dole_2176 - hypothetical protein 2171 59.90 0 2644053..2644820 - 255 158522188 - Dole_2177 - enoyl-CoA hydratase/isomerase 2172 60.38 0 2644836..2645360 - 174 158522189 - Dole_2178 - biotin/lipoyl attachment domain-containing protein 2173 61.00 0 2645555..2647054 - 499 158522190 - Dole_2179 - carbamoyl-phosphate synthase L chain ATP-binding 2174 61.35 0 2647237..2648853 - 538 158522191 - Dole_2180 - propionyl-CoA carboxylase 2175 61.56 0 2649066..2650181 - 371 158522192 - Dole_2181 - acyl-CoA dehydrogenase domain-containing protein 2176 59.32 0 2650214..2651356 - 380 158522193 - Dole_2182 - acyl-CoA dehydrogenase domain-containing protein 2177 56.94 0 2651774..2652277 - 167 158522194 - Dole_2183 - rubrerythrin 2178 56.63 0 2652520..2653137 + 205 158522195 - Dole_2184 - dephospho-CoA kinase 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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