version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 163 61.10 0 179699..181978 + 759 158520180 - Dole_0163 - RNA-binding S1 domain-containing protein 164 45.98 -1 182182..184158 + 658 158520181 - Dole_0164 - AMP-dependent synthetase and ligase 165 58.56 0 184295..184627 + 110 158520182 - Dole_0165 - TfoX domain-containing protein 166 54.03 0 184693..186132 + 479 158520183 - Dole_0166 - amidase 167 40.19 -2 186392..187033 - 213 158520184 - Dole_0167 - TetR family transcriptional regulator 168 44.96 -1 187230..188261 + 343 158520185 - Dole_0168 - enoyl-CoA hydratase/isomerase 169 53.79 0 188285..189154 + 289 158520186 - Dole_0169 - short-chain dehydrogenase/reductase SDR 170 49.24 -1 189216..189542 + 108 158520187 - Dole_0170 - DNA-binding protein 171 59.32 0 189575..191494 - 639 158520188 - Dole_0171 - ABC transporter-related protein 172 60.74 0 191515..192492 - 325 158520189 - Dole_0172 - alpha/beta hydrolase fold 173 57.45 0 192500..193378 - 292 158520190 - Dole_0173 - radical SAM domain-containing protein 174 57.09 0 193732..194274 + 180 158520191 - Dole_0174 - peptidylprolyl isomerase FKBP-type 175 53.51 0 194367..195065 - 232 158520192 - Dole_0175 - TetR family transcriptional regulator 176 57.48 0 195263..196111 + 282 158520193 - Dole_0176 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 177 60.76 0 196133..197182 + 349 158520194 - Dole_0177 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 178 56.68 0 197194..198024 + 276 158520195 - Dole_0178 - hypothetical protein 179 55.17 0 198054..198575 + 173 158520196 - Dole_0179 - hypothetical protein 180 48.23 -1 198631..199026 + 131 158520197 - Dole_0180 - endoribonuclease L-PSP 181 56.18 0 199141..200208 + 355 158520198 - Dole_0181 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 182 55.32 0 200407..201270 + 287 158520199 - Dole_0182 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 183 46.86 -1 201532..202692 + 386 158520200 - Dole_0183 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 184 47.22 -1 202839..203846 + 335 158520201 - Dole_0184 - TetR family transcriptional regulator 185 57.80 0 203920..204675 + 251 158520202 - Dole_0185 - hypothetical protein 186 53.25 0 204860..205612 - 250 158520203 - Dole_0186 - MerR family transcriptional regulator 187 58.11 0 205948..206940 + 330 158520204 - Dole_0187 - molybdenum cofactor biosynthesis protein A 188 54.90 0 207128..207331 + 67 158520205 - Dole_0188 - twin arginine-targeting protein translocase 189 51.85 0 207371..208126 - 251 158520206 - Dole_0189 - MerR family transcriptional regulator 190 58.07 0 208138..208707 - 189 158520207 - Dole_0190 - formylmethanofuran dehydrogenase subunit E region 191 54.90 0 208961..209368 + 135 158520208 - Dole_0191 - hypothetical protein 192 57.73 0 209441..210022 + 193 158520209 - Dole_0192 - Rieske (2Fe-2S) domain-containing protein 193 61.48 0 210022..210387 + 121 158520210 - Dole_0193 - hypothetical protein 194 58.28 0 210524..213505 + 993 158520211 - Dole_0194 - molybdopterin oxidoreductase 195 55.26 0 213550..214215 + 221 158520212 - Dole_0195 - gamma-subunit of ethylbenzene dehydrogenase 196 59.91 0 214273..215442 + 389 158520213 - Dole_0196 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 197 56.13 0 215484..216233 + 249 158520214 - Dole_0197 - delta-subunit of ethylbenzene dehydrogenase 198 59.13 0 216247..217002 + 251 158520215 - Dole_0198 - cytochrome b/b6 domain-containing protein 199 55.78 0 217025..217768 + 247 158520216 - Dole_0199 - hypothetical protein 200 56.90 0 217765..219996 + 743 158520217 - Dole_0200 - cytochrome c class I 201 58.64 0 220159..222813 + 884 158520218 - Dole_0201 - carbohydrate-binding and sugar hydrolysis 202 63.65 +1 222953..224179 + 408 158520219 - Dole_0202 - molybdenum cofactor synthesis domain-containing protein 203 57.34 0 224226..225737 + 503 158520220 - Dole_0203 - acyl-CoA dehydrogenase domain-containing protein 204 61.81 0 225801..226913 + 370 158520221 - Dole_0204 - acyl-CoA dehydrogenase domain-containing protein 205 60.65 0 227044..228987 + 647 158520222 - Dole_0205 - methyl-accepting chemotaxis sensory transducer 206 60.42 0 229297..229776 + 159 158520223 - Dole_0206 - molybdopterin-guanine dinucleotide biosynthesis protein B 207 56.20 0 229858..230220 + 120 158520224 - Dole_0207 - ModE family transcriptional regulator 208 50.00 -1 230312..231187 + 291 158520225 - Dole_0208 - molybdenum ABC transporter, periplasmic molybdate-binding protein 209 49.29 -1 231184..231960 + 258 158520226 - Dole_0209 - binding-protein-dependent transport systems inner membrane component 210 51.47 0 231957..233048 + 363 158520227 - Dole_0210 - ABC transporter-related protein 211 44.44 -2 233101..233361 - 86 158520228 - Dole_0211 - hypothetical protein 212 60.69 0 233500..234420 + 306 158520229 - Dole_0212 - ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein 213 60.61 0 234410..235168 + 252 158520230 - Dole_0213 - binding-protein-dependent transport systems inner membrane component 214 57.88 0 235165..236256 + 363 158520231 - Dole_0214 - ABC transporter-related protein 215 60.49 0 236378..237106 + 242 158520232 - Dole_0215 - hypothetical protein 216 50.41 -1 237312..237557 + 81 158520233 - Dole_0216 - hypothetical protein 217 56.55 0 237669..238706 - 345 158520234 - Dole_0217 - lipid-binding START domain-containing protein 218 59.73 0 238924..239370 + 148 158520235 - Dole_0218 - hypothetical protein 219 57.18 0 239438..241240 + 600 158520236 - Dole_0219 - radical SAM domain-containing protein 220 51.79 0 241252..241419 + 55 158520237 - Dole_0220 - hypothetical protein 221 59.52 0 241716..245924 + 1402 158520238 - Dole_0221 - pyruvate phosphate dikinase PEP/pyruvate-binding 222 60.13 0 246005..247258 + 417 158520239 - Dole_0222 - glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 223 58.59 0 247351..247746 + 131 158520240 - Dole_0223 - response regulator receiver protein 224 60.97 0 247845..249020 - 391 158520241 - Dole_0224 - acetyl-CoA acetyltransferase 225 56.89 0 249046..250896 - 616 158520242 - Dole_0225 - AMP-dependent synthetase and ligase 226 53.83 0 251032..251592 - 186 158520243 - Dole_0226 - sterol-binding domain-containing protein 227 42.17 -2 251659..251907 + 82 158520244 - Dole_0227 - hypothetical protein 228 48.54 -1 251955..252572 + 205 158520245 - Dole_0228 - TetR family transcriptional regulator 229 61.73 0 252624..253778 - 384 158520246 - Dole_0229 - DNA-directed DNA polymerase 230 62.04 0 253885..254403 - 172 158520247 - Dole_0230 - hypothetical protein 231 61.70 0 254396..255181 - 261 158520248 - Dole_0231 - hypothetical protein 232 58.23 0 255885..256868 + 327 158520249 - Dole_0232 - hypothetical protein 233 50.79 0 256865..257626 + 253 158520250 - Dole_0233 - hypothetical protein 234 56.08 0 258242..258874 + 210 158520251 - Dole_0234 - LexA family transcriptional regulator 235 60.17 0 258905..259720 + 271 158520252 - Dole_0235 - hypothetical protein 236 64.26 +1 259717..260922 + 401 158520253 - Dole_0236 - DNA-directed DNA polymerase 237 60.86 0 260928..263939 + 1003 158520254 - Dole_0237 - DNA polymerase III, alpha subunit 238 36.38 -2 264050..265327 + 425 158520255 - Dole_0238 - hypothetical protein 239 55.89 0 265545..266537 - 330 158520256 - Dole_0239 - transcriptional regulator-like protein 240 52.30 0 266668..268929 + 753 158520257 - Dole_0240 - ATPase central domain-containing protein 241 57.48 0 269095..270585 + 496 158520258 - Dole_0241 - hypothetical protein 242 35.82 -2 270853..271938 - 361 158520259 - Dole_0242 - hypothetical protein 243 49.44 -1 272158..273219 - 353 158520260 - Dole_0243 - hypothetical protein 244 52.23 0 273252..274013 - 253 158520261 - Dole_0244 - hypothetical protein 245 55.18 0 274010..277126 - 1038 158520262 - Dole_0245 - HsdR family type I site-specific deoxyribonuclease 246 56.33 0 277119..279092 - 657 158520263 - Dole_0246 - hypothetical protein 247 42.38 -2 279465..281609 - 714 158520264 - Dole_0247 - hypothetical protein 248 43.56 -2 281606..283453 - 615 158520265 - Dole_0248 - hypothetical protein 249 49.41 -1 283450..284631 - 393 158520266 - Dole_0249 - restriction modification system DNA specificity subunit 250 54.17 0 284628..285779 - 383 158520267 - Dole_0250 - putative transcriptional regulator 251 56.28 0 285776..288202 - 808 158520268 - Dole_0251 - type I restriction-modification system, M subunit 252 46.11 -1 288729..289730 + 333 158520269 - Dole_0252 - hypothetical protein 253 56.10 0 289727..290275 + 182 158520270 - Dole_0253 - cell division GTPase-like protein 254 52.33 0 290333..290890 + 185 158520271 - Dole_0254 - hypothetical protein 255 54.80 0 290877..291491 + 204 158520272 - Dole_0255 - tubulin/FtsZ GTPase 256 45.36 -1 291527..292033 + 168 158520273 - Dole_0256 - hypothetical protein 257 54.14 0 292089..292511 + 140 158520274 - Dole_0257 - hypothetical protein 258 48.27 -1 292508..293143 + 211 158520275 - Dole_0258 - hypothetical protein 259 41.80 -2 293145..294113 + 322 158520276 - Dole_0259 - hypothetical protein 260 53.24 0 294125..295450 + 441 158520277 - Dole_0260 - beta-lactamase domain-containing protein 261 54.90 0 295666..299319 + 1217 158520278 - Dole_0261 - DNA polymerase III, alpha subunit 262 57.07 0 299412..300380 + 322 158520279 - Dole_0262 - hypothetical protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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