version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1841 51.90 0 2233128..2233811 + 227 158521858 - Dole_1847 - hypothetical protein 1842 62.23 0 2234150..2235163 + 337 158521859 - Dole_1848 - UDP-glucose 4-epimerase 1843 58.81 0 2235341..2236981 + 546 158521860 - Dole_1849 - glucose-6-phosphate isomerase 1844 59.66 0 2237185..2238198 - 337 158521861 - Dole_1850 - 3-oxoacyl-(acyl-carrier-protein) synthase III 1845 53.14 0 2238344..2239282 - 312 158521862 - Dole_1851 - hypothetical protein 1846 56.89 0 2239745..2240593 - 282 158521863 - Dole_1852 - hypothetical protein 1847 56.99 0 2240621..2242129 - 502 158521864 - Dole_1853 - TPR repeat-containing protein 1848 57.66 0 2242146..2243510 - 454 158521865 - Dole_1854 - adenylosuccinate lyase 1849 55.90 0 2243527..2244306 - 259 158521866 - Dole_1855 - peptidase A24A domain-containing protein 1850 58.22 0 2244812..2247274 + 820 158521867 - Dole_1856 - ATP-dependent protease La 1851 65.06 +1 2247271..2247954 + 227 158521868 - Dole_1857 - peptidase M22 glycoprotease 1852 53.26 0 2248752..2249012 + 86 158521869 - Dole_1858 - hypothetical protein 1853 61.48 0 2249026..2251086 + 686 158521870 - Dole_1859 - TonB-dependent receptor plug 1854 60.61 0 2251400..2252671 + 423 158521871 - Dole_1860 - acyl-CoA dehydrogenase domain-containing protein 1855 44.88 -1 2252856..2253851 + 331 158521872 - Dole_1861 - hypothetical protein 1856 55.83 0 2254410..2255027 + 205 158521873 - Dole_1862 - TetR family transcriptional regulator 1857 54.58 0 2255039..2255311 - 90 158521874 - Dole_1863 - hypothetical protein 1858 55.34 0 2255312..2255620 - 102 158521875 - Dole_1864 - hypothetical protein 1859 59.09 0 2255651..2258251 - 866 158521876 - Dole_1865 - pyruvate phosphate dikinase PEP/pyruvate-binding 1860 60.34 0 2258270..2259202 - 310 158521877 - Dole_1866 - UspA domain-containing protein 1861 58.33 0 2259399..2259650 + 83 158521878 - Dole_1867 - hypothetical protein 1862 53.26 0 2259662..2261824 + 720 158521879 - Dole_1868 - glycosyl transferase family protein 1863 49.32 -1 2261964..2263439 + 491 158521880 - Dole_1869 - hypothetical protein 1864 59.74 0 2263492..2265267 + 591 158521881 - Dole_1870 - beta-lactamase domain-containing protein 1865 45.30 -1 2265396..2266139 - 247 158521882 - Dole_1871 - hypothetical protein 1866 47.12 -1 2266280..2267113 - 277 158521883 - Dole_1872 - hypothetical protein 1867 56.69 0 2267442..2269535 - 697 158521884 - Dole_1873 - radical SAM domain-containing protein 1868 58.77 0 2269958..2271046 + 362 158521885 - Dole_1874 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1869 48.82 -1 2271324..2272847 - 507 158521886 - Dole_1875 - polymorphic membrane protein Chlamydia 1870 62.13 0 2273248..2275494 - 748 158521887 - Dole_1876 - heavy metal translocating P-type ATPase 1871 57.84 0 2275523..2275726 - 67 158521888 - Dole_1877 - heavy metal transport/detoxification protein 1872 54.95 0 2276222..2277049 + 275 158521889 - Dole_1878 - cyclic nucleotide-binding protein 1873 56.44 0 2277060..2278751 - 563 158521890 - Dole_1879 - hypothetical protein 1874 58.80 0 2278858..2279709 - 283 158521891 - Dole_1880 - apurinic endonuclease Apn1 1875 54.93 0 2279890..2280630 + 246 158521892 - Dole_1881 - 1-acylglycerol-3-phosphate O-acyltransferase 1876 55.39 0 2280650..2281057 - 135 158521893 - Dole_1882 - type IV pilus assembly PilZ 1877 60.27 0 2281320..2282210 + 296 158521894 - Dole_1883 - 6-phosphogluconate dehydrogenase NAD-binding 1878 58.79 0 2282575..2283717 - 380 158521895 - Dole_1884 - DegT/DnrJ/EryC1/StrS aminotransferase 1879 59.85 0 2283714..2287262 - 1182 158521896 - Dole_1885 - DNA polymerase III, alpha subunit 1880 60.01 0 2287472..2288929 - 485 158521897 - Dole_1886 - inosine-5'-monophosphate dehydrogenase 1881 39.29 -2 2288963..2289214 - 83 158521898 - Dole_1887 - hypothetical protein 1882 55.17 0 2289261..2289869 + 202 158521899 - Dole_1888 - Sua5/YciO/YrdC/YwlC family protein 1883 62.88 +1 2289945..2291504 + 519 158521900 - Dole_1889 - propionyl-CoA carboxylase 1884 62.81 +1 2291737..2293059 + 440 158521901 - Dole_1890 - radical SAM domain-containing protein 1885 63.07 +1 2293207..2294790 - 527 158521902 - Dole_1891 - GCN5-related N-acetyltransferase 1886 63.33 +1 2294815..2295324 - 169 158521903 - Dole_1892 - hypothetical protein 1887 62.71 +1 2295327..2296691 - 454 158521904 - Dole_1893 - lysine 2,3-aminomutase YodO family protein 1888 62.75 +1 2296907..2297596 - 229 158521905 - Dole_1894 - hypothetical protein 1889 63.57 +1 2297964..2300060 + 698 158521906 - Dole_1895 - short chain dehydrogenase 1890 50.78 0 2300069..2300452 + 127 158521907 - Dole_1896 - glyoxalase/bleomycin resistance protein/dioxygenase 1891 60.34 0 2300467..2301351 + 294 158521908 - Dole_1897 - aldolase 1892 47.85 -1 2301752..2301937 + 61 158521909 - Dole_1898 - hypothetical protein 1893 52.83 0 2302880..2304151 - 423 158521910 - Dole_1899 - YD repeat-containing protein 1894 59.04 0 2304331..2306100 - 589 158521911 - Dole_1900 - D-aminoacylase domain-containing protein 1895 42.19 -2 2306382..2306618 + 78 158521912 - Dole_1901 - prevent-host-death family protein 1896 41.55 -2 2306602..2307015 + 137 158521913 - Dole_1902 - hypothetical protein 1897 56.89 0 2307144..2307992 + 282 158521914 - Dole_1903 - methyltransferase type 11 1898 57.52 0 2308147..2308452 + 101 158521915 - Dole_1904 - hypothetical protein 1899 59.07 0 2308491..2309030 - 179 158521916 - Dole_1905 - NUDIX hydrolase 1900 62.36 0 2309027..2309839 - 270 158521917 - Dole_1906 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1901 63.33 +1 2309943..2310782 - 279 158521918 - Dole_1907 - phosphoribosyltransferase 1902 62.64 +1 2310787..2312028 - 413 158521919 - Dole_1908 - isocitrate dehydrogenase, NADP-dependent 1903 64.07 +1 2312343..2313113 - 256 158521920 - Dole_1909 - RNA methyltransferase 1904 61.14 0 2313110..2313742 - 210 158521921 - Dole_1910 - guanylate kinase 1905 54.76 0 2313755..2314048 - 97 158521922 - Dole_1911 - hypothetical protein 1906 59.55 0 2314223..2315107 - 294 158521923 - Dole_1912 - hypothetical protein 1907 56.85 0 2315263..2315802 - 179 158521924 - Dole_1913 - GTP-binding protein 1908 47.46 -1 2315811..2315987 - 58 158521925 - Dole_1914 - hypothetical protein 1909 57.20 0 2316229..2317041 - 270 158521926 - Dole_1915 - Fe-S cluster domain-containing protein 1910 59.94 0 2317324..2318394 - 356 158521927 - Dole_1916 - hypothetical protein 1911 60.27 0 2318421..2319248 - 275 158521928 - Dole_1917 - short chain dehydrogenase 1912 60.08 0 2319245..2320003 - 252 158521929 - Dole_1918 - short chain dehydrogenase 1913 58.48 0 2320189..2321067 - 292 158521930 - Dole_1919 - amidohydrolase 2 1914 53.43 0 2321203..2321844 - 213 158521931 - Dole_1920 - TetR family transcriptional regulator 1915 59.43 0 2321973..2323175 - 400 158521932 - Dole_1921 - acyl-CoA dehydrogenase domain-containing protein 1916 56.82 0 2323381..2324091 - 236 158521933 - Dole_1922 - phosphoglycerate mutase 1917 61.90 0 2324372..2325148 + 258 158521934 - Dole_1923 - electron transfer flavoprotein alpha/beta-subunit 1918 62.80 +1 2325157..2326140 + 327 158521935 - Dole_1924 - electron transfer flavoprotein alpha subunit 1919 57.95 0 2326522..2327358 + 278 158521936 - Dole_1925 - phosphate binding protein 1920 58.60 0 2327470..2328399 + 309 158521937 - Dole_1926 - phosphate ABC transporter, inner membrane subunit PstC 1921 58.31 0 2328409..2329293 + 294 158521938 - Dole_1927 - phosphate ABC transporter, inner membrane subunit PstA 1922 55.56 0 2329307..2330062 + 251 158521939 - Dole_1928 - phosphate ABC transporter, ATPase subunit 1923 53.60 0 2330249..2330929 + 226 158521940 - Dole_1929 - phosphate uptake regulator, PhoU 1924 56.55 0 2330942..2331643 + 233 158521941 - Dole_1930 - two component transcriptional regulator 1925 55.80 0 2331844..2333619 + 591 158521942 - Dole_1931 - PAS/PAC sensor signal transduction histidine kinase 1926 56.99 0 2333835..2336036 + 733 158521943 - Dole_1932 - esterase/lipase-like protein 1927 56.40 0 2336052..2336762 - 236 158521944 - Dole_1933 - hypothetical protein 1928 59.65 0 2336764..2338845 - 693 158521945 - Dole_1934 - elongation factor G 1929 61.54 0 2339034..2339462 - 142 158521946 - Dole_1935 - NUDIX hydrolase 1930 56.90 0 2339465..2340580 - 371 158521947 - Dole_1936 - DNA repair photolyase-like protein 1931 60.41 0 2340666..2341304 + 212 158521948 - Dole_1937 - beta-lactamase domain-containing protein 1932 52.38 0 2341462..2342196 + 244 158521949 - Dole_1938 - response regulator receiver protein 1933 48.32 -1 2342548..2343321 - 257 158521950 - Dole_1939 - TetR family transcriptional regulator 1934 58.25 0 2343735..2345303 + 522 158521951 - Dole_1940 - SH3 type 3 domain-containing protein 1935 55.60 0 2345450..2347726 + 758 158521952 - Dole_1941 - hypothetical protein 1936 51.84 0 2347844..2348605 - 253 158521953 - Dole_1942 - TetR family transcriptional regulator 1937 54.50 0 2349075..2353184 + 1369 158521954 - Dole_1943 - hypothetical protein 1938 54.99 0 2353270..2354613 + 447 158521955 - Dole_1944 - membrane protein involved in aromatic hydrocarbon degradation 1939 38.01 -2 2355165..2355698 + 177 158521956 - Dole_1945 - hypothetical protein 1940 59.76 0 2356063..2356902 - 279 158521957 - Dole_1946 - prephenate dehydrogenase 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0