version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1484 59.72 0 1778196..1779821 + 541 158521501 - Dole_1490 - L-aspartate oxidase 1485 57.79 0 1779825..1780556 - 243 158521502 - Dole_1491 - ubiquinone/menaquinone biosynthesis methyltransferase 1486 58.38 0 1780684..1781781 + 365 158521503 - Dole_1492 - chaperone protein DnaJ 1487 54.36 0 1781835..1782224 + 129 158521504 - Dole_1493 - putative 6-pyruvoyl tetrahydropterin synthase 1488 62.23 0 1782221..1783144 + 307 158521505 - Dole_1494 - beta-lactamase domain-containing protein 1489 61.51 0 1783141..1784052 + 303 158521506 - Dole_1495 - dihydroorotate dehydrogenase family protein 1490 50.67 0 1784142..1785341 + 399 158521507 - Dole_1496 - NADH:flavin oxidoreductase/NADH oxidase 1491 53.03 0 1785539..1787680 - 713 158521508 - Dole_1497 - molydopterin dinucleotide-binding region 1492 54.00 0 1787765..1788214 - 149 158521509 - Dole_1498 - thioesterase superfamily protein 1493 56.92 0 1788636..1790543 + 635 158521510 - Dole_1499 - AMP-dependent synthetase and ligase 1494 54.66 0 1790776..1791849 - 357 158521511 - Dole_1500 - diguanylate cyclase 1495 59.55 0 1792143..1793168 - 341 158521512 - Dole_1501 - radical SAM domain-containing protein 1496 60.63 0 1793165..1793860 - 231 158521513 - Dole_1502 - ribonuclease III 1497 56.84 0 1793876..1794760 - 294 158521514 - Dole_1503 - phosphotransferase domain-containing protein 1498 53.99 0 1794750..1795112 - 120 158521515 - Dole_1504 - TraR/DksA family transcriptional regulator 1499 55.91 0 1795313..1795963 + 216 158521516 - Dole_1505 - hypothetical protein 1500 61.67 0 1796092..1796931 + 279 158521517 - Dole_1506 - short-chain dehydrogenase/reductase SDR 1501 61.59 0 1796928..1798307 - 459 158521518 - Dole_1507 - hypothetical protein 1502 60.91 0 1798304..1801153 - 949 158521519 - Dole_1508 - hypothetical protein 1503 57.59 0 1801382..1802218 + 278 158521520 - Dole_1509 - response regulator receiver protein 1504 57.57 0 1802261..1803865 + 534 158521521 - Dole_1510 - WD40 domain-containing protein 1505 57.56 0 1804001..1804933 + 310 158521522 - Dole_1511 - diacylglycerol kinase catalytic region 1506 61.61 0 1805179..1806108 - 309 158521523 - Dole_1512 - thioredoxin reductase 1507 55.45 0 1806113..1806442 - 109 158521524 - Dole_1513 - thioredoxin 1508 55.25 0 1806890..1808203 + 437 158521525 - Dole_1514 - diguanylate phosphodiesterase 1509 57.67 0 1808490..1809167 + 225 158521526 - Dole_1515 - phosphoribosylaminoimidazolecarboxamide formyltransferase 1510 58.91 0 1809202..1810452 + 416 158521527 - Dole_1516 - phosphoribosylaminoimidazolecarboxamide formyltransferase 1511 56.03 0 1810503..1810850 + 115 158521528 - Dole_1517 - hydrogenase nickel insertion protein HypA 1512 58.07 0 1810975..1812021 + 348 158521529 - Dole_1518 - hypothetical protein 1513 60.94 0 1812018..1813100 + 360 158521530 - Dole_1519 - A/G-specific adenine glycosylase 1514 58.95 0 1813134..1815467 - 777 158521531 - Dole_1520 - PAS/PAC sensor hybrid histidine kinase 1515 51.55 0 1815500..1816015 - 171 158521532 - Dole_1521 - hypothetical protein 1516 57.22 0 1816064..1816846 - 260 158521533 - Dole_1522 - TPR repeat-containing protein 1517 58.95 0 1816956..1817810 - 284 158521534 - Dole_1523 - NADPH-dependent FMN reductase 1518 57.00 0 1817952..1818965 - 337 158521535 - Dole_1524 - radical SAM domain-containing protein 1519 60.22 0 1818946..1819767 - 273 158521536 - Dole_1525 - methyltransferase type 11 1520 61.61 0 1819976..1821043 + 355 158521537 - Dole_1526 - 2-nitropropane dioxygenase NPD 1521 58.96 0 1821046..1822887 - 613 158521538 - Dole_1527 - peptidase M48 Ste24p 1522 57.19 0 1822979..1823569 - 196 158521539 - Dole_1528 - LemA family protein 1523 60.63 0 1823614..1824243 - 209 158521540 - Dole_1529 - rubredoxin-type Fe(Cys)4 protein 1524 52.38 0 1824294..1824503 - 69 158521541 - Dole_1530 - hypothetical protein 1525 59.30 0 1824615..1825184 - 189 158521542 - Dole_1531 - hypothetical protein 1526 59.40 0 1825181..1827106 - 641 158521543 - Dole_1532 - hypothetical protein 1527 58.43 0 1827103..1828461 - 452 158521544 - Dole_1533 - cyclic nucleotide-binding protein 1528 58.04 0 1828579..1829436 - 285 158521545 - Dole_1534 - alpha/beta hydrolase fold 1529 57.16 0 1829463..1830293 - 276 158521546 - Dole_1535 - Fe-S cluster domain-containing protein 1530 53.73 0 1830474..1830929 - 151 158521547 - Dole_1536 - rubrerythrin 1531 63.95 +1 1830959..1831732 - 257 158521548 - Dole_1537 - formate dehydrogenase family accessory protein FdhD 1532 56.76 0 1831760..1832314 - 184 158521549 - Dole_1538 - hypothetical protein 1533 55.99 0 1832327..1832710 - 127 158521550 - Dole_1539 - pyridoxamine 5'-phosphate oxidase-related FMN-binding 1534 56.33 0 1832738..1833946 - 402 158521551 - Dole_1540 - methyltransferase type 11 1535 57.63 0 1834167..1835228 + 353 158521552 - Dole_1541 - methionine-R-sulfoxide reductase 1536 60.56 0 1835242..1836846 - 534 158521553 - Dole_1542 - TPR repeat-containing protein 1537 59.11 0 1836882..1838402 - 506 158521554 - Dole_1543 - hypothetical protein 1538 62.73 +1 1838491..1839252 - 253 158521555 - Dole_1544 - phosphotransferase KptA/Tpt1 1539 63.40 +1 1839342..1840625 + 427 158521556 - Dole_1545 - glutamate-1-semialdehyde-2,1-aminomutase 1540 59.71 0 1840668..1842305 - 545 158521557 - Dole_1546 - histidine kinase 1541 58.81 0 1842302..1843306 - 334 158521558 - Dole_1547 - hypothetical protein 1542 53.62 0 1843619..1844239 + 206 158521559 - Dole_1548 - TetR family transcriptional regulator 1543 57.06 0 1844331..1846463 + 710 158521560 - Dole_1549 - short-chain dehydrogenase/reductase SDR 1544 55.62 0 1846529..1849270 + 913 158521561 - Dole_1550 - short-chain dehydrogenase/reductase SDR 1545 57.70 0 1849283..1850497 + 404 158521562 - Dole_1551 - acetyl-CoA acetyltransferase 1546 59.13 0 1850573..1851727 + 384 158521563 - Dole_1552 - acyl-CoA dehydrogenase domain-containing protein 1547 60.03 0 1851747..1852892 + 381 158521564 - Dole_1553 - acyl-CoA dehydrogenase domain-containing protein 1548 58.05 0 1853024..1854172 + 382 158521565 - Dole_1554 - L-carnitine dehydratase/bile acid-inducible protein F 1549 60.25 0 1854172..1854810 + 212 158521566 - Dole_1555 - succinate dehydrogenase/fumarate reductase cytochrome b subunit 1550 60.71 0 1854832..1856745 + 637 158521567 - Dole_1556 - succinate dehydrogenase flavoprotein subunit 1551 60.19 0 1856745..1857500 + 251 158521568 - Dole_1557 - succinate dehydrogenase/fumarate reductase iron-sulfur subunit 1552 62.62 +1 1857497..1858114 + 205 158521569 - Dole_1558 - hypothetical protein 1553 59.65 0 1858359..1858985 + 208 158521570 - Dole_1559 - hypothetical protein 1554 52.16 0 1859189..1859836 + 215 158521571 - Dole_1560 - hypothetical protein 1555 60.03 0 1860062..1860799 + 245 158521572 - Dole_1561 - ABC transporter-related protein 1556 57.22 0 1860783..1861703 + 306 158521573 - Dole_1562 - SufBD protein 1557 59.40 0 1861786..1862583 - 265 158521574 - Dole_1563 - tryptophan synthase, alpha subunit 1558 63.55 +1 1862587..1863807 - 406 158521575 - Dole_1564 - tryptophan synthase subunit beta 1559 59.36 0 1863807..1864490 - 227 158521576 - Dole_1565 - phosphoribosylanthranilate isomerase 1560 57.32 0 1864591..1865382 - 263 158521577 - Dole_1566 - indole-3-glycerol-phosphate synthase 1561 59.31 0 1865387..1866406 - 339 158521578 - Dole_1567 - anthranilate phosphoribosyltransferase 1562 59.04 0 1866430..1866993 - 187 158521579 - Dole_1568 - glutamine amidotransferase of anthranilate synthase 1563 60.08 0 1867098..1868585 - 495 158521580 - Dole_1569 - anthranilate synthase 1564 62.00 0 1869079..1870320 + 413 158521581 - Dole_1570 - competence/damage-inducible protein CinA 1565 61.49 0 1870400..1871578 + 392 158521582 - Dole_1571 - amidohydrolase 1566 56.14 0 1871791..1872018 + 75 158521583 - Dole_1572 - hypothetical protein 1567 59.82 0 1872027..1873385 - 452 158521584 - Dole_1573 - hydroxypyruvate reductase 1568 59.82 0 1873651..1874205 + 184 158521585 - Dole_1574 - hypothetical protein 1569 56.20 0 1874541..1876814 + 757 158521586 - Dole_1575 - hypothetical protein 1570 59.30 0 1876884..1877657 + 257 158521587 - Dole_1576 - cobyrinic acid ac-diamide synthase 1571 58.70 0 1877971..1878723 - 250 158521588 - Dole_1577 - peptidylprolyl isomerase FKBP-type 1572 60.03 0 1878829..1880637 - 602 158521589 - Dole_1578 - TPR repeat-containing serine/threonin protein kinase 1573 59.08 0 1880793..1881596 + 267 158521590 - Dole_1579 - hypothetical protein 1574 55.14 0 1881723..1882598 + 291 158521591 - Dole_1580 - hypothetical protein 1575 58.22 0 1882601..1883038 + 145 158521592 - Dole_1581 - hypothetical protein 1576 57.34 0 1883079..1885382 + 767 158521593 - Dole_1582 - TPR repeat-containing protein 1577 55.15 0 1885419..1886564 + 381 158521594 - Dole_1583 - hypothetical protein 1578 56.93 0 1886735..1887874 + 379 158521595 - Dole_1584 - aspartate aminotransferase 1579 61.72 0 1887861..1889276 + 471 158521596 - Dole_1585 - RNA methyltransferase 1580 58.23 0 1889325..1889810 - 161 158521597 - Dole_1586 - hypothetical protein 1581 58.40 0 1890252..1890626 + 124 158521598 - Dole_1587 - hypothetical protein 1582 55.51 0 1890684..1891409 + 241 158521599 - Dole_1588 - type IV pilus assembly PilZ 1583 59.96 0 1891475..1892368 + 297 158521600 - Dole_1589 - alpha/beta hydrolase fold 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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