version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1404 49.28 -1 1677292..1677705 + 137 158521421 - Dole_1410 - hypothetical protein 1405 56.70 0 1677887..1680013 + 708 158521422 - Dole_1411 - TPR repeat-containing protein 1406 54.95 0 1680001..1680828 + 275 158521423 - Dole_1412 - prolipoprotein diacylglyceryl transferase 1407 51.80 0 1680986..1681624 + 212 158521424 - Dole_1413 - hypothetical protein 1408 59.27 0 1681614..1685492 - 1292 158521425 - Dole_1414 - hypothetical protein 1409 59.77 0 1685495..1685929 - 144 158521426 - Dole_1415 - hypothetical protein 1410 56.31 0 1685926..1686543 - 205 158521427 - Dole_1416 - hypothetical protein 1411 57.62 0 1686680..1688746 + 688 158521428 - Dole_1417 - hypothetical protein 1412 56.33 0 1688820..1689593 + 257 158521429 - Dole_1418 - electron transfer flavoprotein alpha/beta-subunit 1413 59.81 0 1689593..1690555 + 320 158521430 - Dole_1419 - electron transfer flavoprotein alpha subunit 1414 55.39 0 1690646..1692277 - 543 158521431 - Dole_1420 - putative PAS/PAC sensor protein 1415 58.46 0 1692281..1693888 - 535 158521432 - Dole_1421 - putative PAS/PAC sensor protein 1416 56.56 0 1694221..1695150 + 309 158521433 - Dole_1422 - chaperone DnaJ domain-containing protein 1417 53.18 0 1695253..1695786 + 177 158521434 - Dole_1423 - hypoxanthine phosphoribosyltransferase 1418 58.02 0 1695812..1697719 + 635 158521435 - Dole_1424 - Zinc finger-domain-containing protein 1419 59.64 0 1697974..1698357 + 127 158521436 - Dole_1425 - hypothetical protein 1420 63.27 +1 1698381..1699322 + 313 158521437 - Dole_1426 - D-alanine--D-alanine ligase 1421 62.44 +1 1699399..1701174 + 591 158521438 - Dole_1427 - phosphoribosylamine--glycine ligase 1422 63.13 +1 1701131..1701808 + 225 158521439 - Dole_1428 - Sua5/YciO/YrdC/YwlC family protein 1423 60.04 0 1701996..1702916 + 306 158521440 - Dole_1429 - beta-lactamase domain-containing protein 1424 59.45 0 1703062..1704294 + 410 158521441 - Dole_1430 - major facilitator transporter 1425 57.91 0 1704393..1705568 + 391 158521442 - Dole_1431 - permease YjgP/YjgQ family protein 1426 58.24 0 1705565..1706644 + 359 158521443 - Dole_1432 - permease YjgP/YjgQ family protein 1427 60.61 0 1706664..1709042 + 792 158521444 - Dole_1433 - tetraacyldisaccharide 4'-kinase 1428 54.28 0 1709194..1710000 + 268 158521445 - Dole_1434 - hypothetical protein 1429 50.87 0 1710104..1710907 + 267 158521446 - Dole_1435 - FkbM family methyltransferase 1430 48.64 -1 1710963..1712177 - 404 158521447 - Dole_1436 - O-antigen polymerase 1431 56.21 0 1712188..1713249 - 353 158521448 - Dole_1437 - glycosyl transferase group 1 1432 53.37 0 1713255..1714277 - 340 158521449 - Dole_1438 - hypothetical protein 1433 52.84 0 1714317..1715162 - 281 158521450 - Dole_1439 - hypothetical protein 1434 55.30 0 1715201..1716652 - 483 158521451 - Dole_1440 - glycosyl transferase family protein 1435 49.70 -1 1716696..1717031 - 111 158521452 - Dole_1441 - GtrA family protein 1436 53.14 0 1717048..1717986 - 312 158521453 - Dole_1442 - glycosyl transferase family protein 1437 63.19 +1 1717986..1719137 - 383 158521454 - Dole_1443 - glycosyl transferase group 1 1438 58.85 0 1719113..1720033 - 306 158521455 - Dole_1444 - nucleoside-diphosphate-sugar epimerase 1439 59.32 0 1720089..1721000 - 303 158521456 - Dole_1445 - lipid A biosynthesis acyltransferase 1440 61.82 0 1721408..1724608 + 1066 158521457 - Dole_1446 - carbamoyl phosphate synthase large subunit 1441 56.99 0 1724913..1725470 + 185 158521458 - Dole_1447 - hypothetical protein 1442 55.20 0 1725537..1726103 + 188 158521459 - Dole_1448 - hypothetical protein 1443 64.49 +1 1726396..1727958 + 520 158521460 - Dole_1449 - hypothetical protein 1444 62.39 0 1727951..1729375 + 474 158521461 - Dole_1450 - GTP-binding protein HSR1-related 1445 46.87 -1 1730103..1731860 + 585 158521462 - Dole_1451 - TPR repeat-containing protein 1446 61.27 0 1731916..1733343 - 475 158521463 - Dole_1452 - major facilitator transporter 1447 59.62 0 1733383..1736916 - 1177 158521464 - Dole_1453 - pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1448 60.08 0 1737161..1737661 + 166 158521465 - Dole_1454 - MarR family transcriptional regulator 1449 61.84 0 1737717..1739624 + 635 158521466 - Dole_1455 - NADH:flavin oxidoreductase/NADH oxidase 1450 66.28 +1 1739661..1740434 + 257 158521467 - Dole_1456 - enoyl-CoA hydratase 1451 56.57 0 1740449..1740646 + 65 158521468 - Dole_1457 - hypothetical protein 1452 62.18 0 1740711..1741223 - 170 158521469 - Dole_1458 - thioesterase superfamily protein 1453 60.19 0 1741258..1742322 - 354 158521470 - Dole_1459 - aminoglycoside phosphotransferase 1454 53.29 0 1742629..1743129 + 166 158521471 - Dole_1460 - peptidyl-prolyl cis-trans isomerase cyclophilin type 1455 54.44 0 1743547..1745517 + 656 158521472 - Dole_1461 - carbon-monoxide dehydrogenase, catalytic subunit 1456 59.43 0 1745703..1747595 + 630 158521473 - Dole_1462 - asparagine synthase (glutamine-hydrolyzing) 1457 57.37 0 1747845..1748780 + 311 158521474 - Dole_1463 - glutamate--cysteine ligase GCS2 1458 54.02 0 1748777..1749037 + 86 158521475 - Dole_1464 - glutaredoxin 3 1459 58.95 0 1749215..1751158 + 647 158521476 - Dole_1465 - ferredoxin 1460 53.94 0 1751286..1753100 + 604 158521477 - Dole_1466 - hypothetical protein 1461 61.86 0 1753113..1754006 - 297 158521478 - Dole_1467 - NAD-dependent epimerase/dehydratase 1462 56.62 0 1754179..1754994 - 271 158521479 - Dole_1468 - beta-lactamase domain-containing protein 1463 59.73 0 1755076..1756041 - 321 158521480 - Dole_1469 - beta-lactamase domain-containing protein 1464 62.21 0 1756083..1758863 - 926 158521481 - Dole_1470 - NifA subfamily transcriptional regulator 1465 53.61 0 1758964..1759323 + 119 158521482 - Dole_1471 - hypothetical protein 1466 61.48 0 1759517..1760770 + 417 158521483 - Dole_1472 - Propanoyl-CoA C-acyltransferase 1467 59.03 0 1760904..1762514 + 536 158521484 - Dole_1473 - AMP-dependent synthetase and ligase 1468 59.30 0 1762579..1763583 + 334 158521485 - Dole_1474 - nitroreductase 1469 56.05 0 1763730..1764539 + 269 158521486 - Dole_1475 - short-chain dehydrogenase/reductase SDR 1470 61.28 0 1764688..1766208 + 506 158521487 - Dole_1476 - acetyl-CoA acetyltransferase 1471 42.54 -2 1766238..1766552 - 104 158521488 - Dole_1477 - hypothetical protein 1472 44.44 -2 1766566..1766826 - 86 158521489 - Dole_1478 - hypothetical protein 1473 39.49 -2 1766992..1767186 - 64 158521490 - Dole_1479 - hypothetical protein 1474 50.91 0 1767572..1769329 - 585 158521491 - Dole_1480 - radical SAM domain-containing protein 1475 62.50 +1 1769690..1770049 - 119 158521492 - Dole_1481 - dinitrogenase iron-molybdenum cofactor biosynthesis protein 1476 56.65 0 1770066..1770674 - 202 158521493 - Dole_1482 - hypothetical protein 1477 64.01 +1 1770950..1771663 - 237 158521494 - Dole_1483 - hypothetical protein 1478 44.88 -1 1772152..1773147 - 331 158521495 - Dole_1484 - hypothetical protein 1479 61.21 0 1773194..1774807 - 537 158521496 - Dole_1485 - iron-sulfur cluster binding protein 1480 53.93 0 1774835..1775674 - 279 158521497 - Dole_1486 - metal-dependent hydrolase 1481 60.14 0 1775744..1776601 - 285 158521498 - Dole_1487 - ribosomal L11 methyltransferase 1482 57.71 0 1776605..1777363 - 252 158521499 - Dole_1488 - cobyrinic acid ac-diamide synthase 1483 59.34 0 1777593..1778165 + 190 158521500 - Dole_1489 - SH3 type 3 domain-containing protein 1484 59.72 0 1778196..1779821 + 541 158521501 - Dole_1490 - L-aspartate oxidase 1485 57.79 0 1779825..1780556 - 243 158521502 - Dole_1491 - ubiquinone/menaquinone biosynthesis methyltransferase 1486 58.38 0 1780684..1781781 + 365 158521503 - Dole_1492 - chaperone protein DnaJ 1487 54.36 0 1781835..1782224 + 129 158521504 - Dole_1493 - putative 6-pyruvoyl tetrahydropterin synthase 1488 62.23 0 1782221..1783144 + 307 158521505 - Dole_1494 - beta-lactamase domain-containing protein 1489 61.51 0 1783141..1784052 + 303 158521506 - Dole_1495 - dihydroorotate dehydrogenase family protein 1490 50.67 0 1784142..1785341 + 399 158521507 - Dole_1496 - NADH:flavin oxidoreductase/NADH oxidase 1491 53.03 0 1785539..1787680 - 713 158521508 - Dole_1497 - molydopterin dinucleotide-binding region 1492 54.00 0 1787765..1788214 - 149 158521509 - Dole_1498 - thioesterase superfamily protein 1493 56.92 0 1788636..1790543 + 635 158521510 - Dole_1499 - AMP-dependent synthetase and ligase 1494 54.66 0 1790776..1791849 - 357 158521511 - Dole_1500 - diguanylate cyclase 1495 59.55 0 1792143..1793168 - 341 158521512 - Dole_1501 - radical SAM domain-containing protein 1496 60.63 0 1793165..1793860 - 231 158521513 - Dole_1502 - ribonuclease III 1497 56.84 0 1793876..1794760 - 294 158521514 - Dole_1503 - phosphotransferase domain-containing protein 1498 53.99 0 1794750..1795112 - 120 158521515 - Dole_1504 - TraR/DksA family transcriptional regulator 1499 55.91 0 1795313..1795963 + 216 158521516 - Dole_1505 - hypothetical protein 1500 61.67 0 1796092..1796931 + 279 158521517 - Dole_1506 - short-chain dehydrogenase/reductase SDR 1501 61.59 0 1796928..1798307 - 459 158521518 - Dole_1507 - hypothetical protein 1502 60.91 0 1798304..1801153 - 949 158521519 - Dole_1508 - hypothetical protein 1503 57.59 0 1801382..1802218 + 278 158521520 - Dole_1509 - response regulator receiver protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0