version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1373 53.92 0 1642015..1642218 - 67 158521390 - Dole_1379 - hypothetical protein 1374 51.49 0 1642234..1642938 - 234 158521391 - Dole_1380 - hypothetical protein 1375 46.94 -1 1643022..1643462 - 146 158521392 - Dole_1381 - membrane protein-like protein 1376 47.29 -1 1643548..1644321 - 257 158521393 - Dole_1382 - hypothetical protein 1377 46.71 -1 1644338..1644838 - 166 158521394 - Dole_1383 - hypothetical protein 1378 51.37 0 1645605..1646957 + 450 158521395 - Dole_1384 - transposase IS4 family protein 1379 45.51 -1 1647210..1647521 - 103 158521396 - Dole_1385 - XRE family plasmid maintenance system antidote protein 1380 44.44 -2 1647534..1647812 - 92 158521397 - Dole_1386 - plasmid maintenance system killer 1381 51.79 0 1648109..1648666 - 185 158521398 - Dole_1387 - hypothetical protein 1382 32.68 -2 1648874..1649947 - 357 158521399 - Dole_1388 - hypothetical protein 1383 35.67 -2 1650309..1650608 - 99 158521400 - Dole_1389 - hypothetical protein 1384 41.20 -2 1651177..1651392 - 71 158521401 - Dole_1390 - hypothetical protein 1385 62.53 +1 1653023..1653916 - 297 158521402 - Dole_1391 - thiamine pyrophosphate binding domain-containing protein 1386 64.06 +1 1654315..1655505 - 396 158521403 - Dole_1392 - pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1387 60.33 0 1655786..1656085 - 99 158521404 - Dole_1393 - pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit 1388 60.78 0 1656090..1656650 - 186 158521405 - Dole_1394 - pyruvate/ketoisovalerate oxidoreductase, gamma subunit 1389 61.53 0 1657003..1658520 - 505 158521406 - Dole_1395 - glycerol kinase 1390 60.93 0 1658517..1659353 - 278 158521407 - Dole_1396 - dihydrodipicolinate reductase 1391 59.55 0 1659808..1660833 + 341 158521408 - Dole_1397 - hypothetical protein 1392 54.30 0 1660992..1661282 + 96 158521409 - Dole_1398 - antibiotic biosynthesis monooxygenase 1393 60.19 0 1661303..1662367 + 354 158521410 - Dole_1399 - Zn-dependent hydrolase of the beta-lactamase fold-like protein 1394 62.70 +1 1662364..1665240 + 958 158521411 - Dole_1400 - peptidase M16 domain-containing protein 1395 57.59 0 1665411..1666589 + 392 158521412 - Dole_1401 - cystathionine gamma-synthase 1396 57.29 0 1666636..1668213 + 525 158521413 - Dole_1402 - beta-lactamase domain-containing protein 1397 61.55 0 1668353..1670149 + 598 158521414 - Dole_1403 - hypothetical protein 1398 55.49 0 1670162..1670707 + 181 158521415 - Dole_1404 - hypothetical protein 1399 59.24 0 1670709..1671233 + 174 158521416 - Dole_1405 - hypothetical protein 1400 61.10 0 1671263..1672879 + 538 158521417 - Dole_1406 - type II and III secretion system protein 1401 57.15 0 1672883..1674175 + 430 158521418 - Dole_1407 - type II secretory pathway ATPase ExeA 1402 60.90 0 1674201..1675934 + 577 158521419 - Dole_1408 - type II secretion system protein E 1403 58.05 0 1675941..1677158 + 405 158521420 - Dole_1409 - type II secretion system protein 1404 49.28 -1 1677292..1677705 + 137 158521421 - Dole_1410 - hypothetical protein 1405 56.70 0 1677887..1680013 + 708 158521422 - Dole_1411 - TPR repeat-containing protein 1406 54.95 0 1680001..1680828 + 275 158521423 - Dole_1412 - prolipoprotein diacylglyceryl transferase 1407 51.80 0 1680986..1681624 + 212 158521424 - Dole_1413 - hypothetical protein 1408 59.27 0 1681614..1685492 - 1292 158521425 - Dole_1414 - hypothetical protein 1409 59.77 0 1685495..1685929 - 144 158521426 - Dole_1415 - hypothetical protein 1410 56.31 0 1685926..1686543 - 205 158521427 - Dole_1416 - hypothetical protein 1411 57.62 0 1686680..1688746 + 688 158521428 - Dole_1417 - hypothetical protein 1412 56.33 0 1688820..1689593 + 257 158521429 - Dole_1418 - electron transfer flavoprotein alpha/beta-subunit 1413 59.81 0 1689593..1690555 + 320 158521430 - Dole_1419 - electron transfer flavoprotein alpha subunit 1414 55.39 0 1690646..1692277 - 543 158521431 - Dole_1420 - putative PAS/PAC sensor protein 1415 58.46 0 1692281..1693888 - 535 158521432 - Dole_1421 - putative PAS/PAC sensor protein 1416 56.56 0 1694221..1695150 + 309 158521433 - Dole_1422 - chaperone DnaJ domain-containing protein 1417 53.18 0 1695253..1695786 + 177 158521434 - Dole_1423 - hypoxanthine phosphoribosyltransferase 1418 58.02 0 1695812..1697719 + 635 158521435 - Dole_1424 - Zinc finger-domain-containing protein 1419 59.64 0 1697974..1698357 + 127 158521436 - Dole_1425 - hypothetical protein 1420 63.27 +1 1698381..1699322 + 313 158521437 - Dole_1426 - D-alanine--D-alanine ligase 1421 62.44 +1 1699399..1701174 + 591 158521438 - Dole_1427 - phosphoribosylamine--glycine ligase 1422 63.13 +1 1701131..1701808 + 225 158521439 - Dole_1428 - Sua5/YciO/YrdC/YwlC family protein 1423 60.04 0 1701996..1702916 + 306 158521440 - Dole_1429 - beta-lactamase domain-containing protein 1424 59.45 0 1703062..1704294 + 410 158521441 - Dole_1430 - major facilitator transporter 1425 57.91 0 1704393..1705568 + 391 158521442 - Dole_1431 - permease YjgP/YjgQ family protein 1426 58.24 0 1705565..1706644 + 359 158521443 - Dole_1432 - permease YjgP/YjgQ family protein 1427 60.61 0 1706664..1709042 + 792 158521444 - Dole_1433 - tetraacyldisaccharide 4'-kinase 1428 54.28 0 1709194..1710000 + 268 158521445 - Dole_1434 - hypothetical protein 1429 50.87 0 1710104..1710907 + 267 158521446 - Dole_1435 - FkbM family methyltransferase 1430 48.64 -1 1710963..1712177 - 404 158521447 - Dole_1436 - O-antigen polymerase 1431 56.21 0 1712188..1713249 - 353 158521448 - Dole_1437 - glycosyl transferase group 1 1432 53.37 0 1713255..1714277 - 340 158521449 - Dole_1438 - hypothetical protein 1433 52.84 0 1714317..1715162 - 281 158521450 - Dole_1439 - hypothetical protein 1434 55.30 0 1715201..1716652 - 483 158521451 - Dole_1440 - glycosyl transferase family protein 1435 49.70 -1 1716696..1717031 - 111 158521452 - Dole_1441 - GtrA family protein 1436 53.14 0 1717048..1717986 - 312 158521453 - Dole_1442 - glycosyl transferase family protein 1437 63.19 +1 1717986..1719137 - 383 158521454 - Dole_1443 - glycosyl transferase group 1 1438 58.85 0 1719113..1720033 - 306 158521455 - Dole_1444 - nucleoside-diphosphate-sugar epimerase 1439 59.32 0 1720089..1721000 - 303 158521456 - Dole_1445 - lipid A biosynthesis acyltransferase 1440 61.82 0 1721408..1724608 + 1066 158521457 - Dole_1446 - carbamoyl phosphate synthase large subunit 1441 56.99 0 1724913..1725470 + 185 158521458 - Dole_1447 - hypothetical protein 1442 55.20 0 1725537..1726103 + 188 158521459 - Dole_1448 - hypothetical protein 1443 64.49 +1 1726396..1727958 + 520 158521460 - Dole_1449 - hypothetical protein 1444 62.39 0 1727951..1729375 + 474 158521461 - Dole_1450 - GTP-binding protein HSR1-related 1445 46.87 -1 1730103..1731860 + 585 158521462 - Dole_1451 - TPR repeat-containing protein 1446 61.27 0 1731916..1733343 - 475 158521463 - Dole_1452 - major facilitator transporter 1447 59.62 0 1733383..1736916 - 1177 158521464 - Dole_1453 - pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1448 60.08 0 1737161..1737661 + 166 158521465 - Dole_1454 - MarR family transcriptional regulator 1449 61.84 0 1737717..1739624 + 635 158521466 - Dole_1455 - NADH:flavin oxidoreductase/NADH oxidase 1450 66.28 +1 1739661..1740434 + 257 158521467 - Dole_1456 - enoyl-CoA hydratase 1451 56.57 0 1740449..1740646 + 65 158521468 - Dole_1457 - hypothetical protein 1452 62.18 0 1740711..1741223 - 170 158521469 - Dole_1458 - thioesterase superfamily protein 1453 60.19 0 1741258..1742322 - 354 158521470 - Dole_1459 - aminoglycoside phosphotransferase 1454 53.29 0 1742629..1743129 + 166 158521471 - Dole_1460 - peptidyl-prolyl cis-trans isomerase cyclophilin type 1455 54.44 0 1743547..1745517 + 656 158521472 - Dole_1461 - carbon-monoxide dehydrogenase, catalytic subunit 1456 59.43 0 1745703..1747595 + 630 158521473 - Dole_1462 - asparagine synthase (glutamine-hydrolyzing) 1457 57.37 0 1747845..1748780 + 311 158521474 - Dole_1463 - glutamate--cysteine ligase GCS2 1458 54.02 0 1748777..1749037 + 86 158521475 - Dole_1464 - glutaredoxin 3 1459 58.95 0 1749215..1751158 + 647 158521476 - Dole_1465 - ferredoxin 1460 53.94 0 1751286..1753100 + 604 158521477 - Dole_1466 - hypothetical protein 1461 61.86 0 1753113..1754006 - 297 158521478 - Dole_1467 - NAD-dependent epimerase/dehydratase 1462 56.62 0 1754179..1754994 - 271 158521479 - Dole_1468 - beta-lactamase domain-containing protein 1463 59.73 0 1755076..1756041 - 321 158521480 - Dole_1469 - beta-lactamase domain-containing protein 1464 62.21 0 1756083..1758863 - 926 158521481 - Dole_1470 - NifA subfamily transcriptional regulator 1465 53.61 0 1758964..1759323 + 119 158521482 - Dole_1471 - hypothetical protein 1466 61.48 0 1759517..1760770 + 417 158521483 - Dole_1472 - Propanoyl-CoA C-acyltransferase 1467 59.03 0 1760904..1762514 + 536 158521484 - Dole_1473 - AMP-dependent synthetase and ligase 1468 59.30 0 1762579..1763583 + 334 158521485 - Dole_1474 - nitroreductase 1469 56.05 0 1763730..1764539 + 269 158521486 - Dole_1475 - short-chain dehydrogenase/reductase SDR 1470 61.28 0 1764688..1766208 + 506 158521487 - Dole_1476 - acetyl-CoA acetyltransferase 1471 42.54 -2 1766238..1766552 - 104 158521488 - Dole_1477 - hypothetical protein 1472 44.44 -2 1766566..1766826 - 86 158521489 - Dole_1478 - hypothetical protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0