version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1092 52.16 0 1300954..1301718 + 254 158521109 - Dole_1095 - NERD domain-containing protein 1093 49.44 -1 1301718..1304903 + 1061 158521110 - Dole_1096 - ankyrin 1094 59.43 0 1305011..1307236 - 741 158521111 - Dole_1097 - para-aminobenzoate synthase, subunit I 1095 56.13 0 1307241..1307876 - 211 158521112 - Dole_1098 - glutamine amidotransferase of anthranilate synthase 1096 59.41 0 1307995..1310448 - 817 158521113 - Dole_1099 - ATP-dependent protease La 1097 55.41 0 1310517..1310969 - 150 158521114 - Dole_1100 - heat shock protein Hsp20 1098 60.92 0 1311170..1312126 + 318 158521115 - Dole_1101 - hypothetical protein 1099 57.10 0 1312212..1313309 + 365 158521116 - Dole_1102 - hypothetical protein 1100 57.11 0 1313895..1314731 - 278 158521117 - Dole_1103 - cytochrome c assembly protein 1101 58.30 0 1314773..1316146 - 457 158521118 - Dole_1104 - ResB family protein 1102 62.86 +1 1316419..1317258 + 279 158521119 - Dole_1105 - uroporphyrin-III C/tetrapyrrole methyltransferase 1103 57.50 0 1317639..1318892 + 417 158521120 - Dole_1106 - trimethylamine:corrinoid methyltransferase-like protein 1104 58.98 0 1318937..1320550 + 537 158521121 - Dole_1107 - asparagine synthetase B 1105 61.72 0 1320559..1321407 + 282 158521122 - Dole_1108 - hypothetical protein 1106 58.72 0 1321425..1322657 + 410 158521123 - Dole_1109 - trimethylamine:corrinoid methyltransferase-like protein 1107 62.84 +1 1322680..1323306 + 208 158521124 - Dole_1110 - cobalamin B12-binding domain-containing protein 1108 60.39 0 1323353..1324786 + 477 158521125 - Dole_1111 - trimethylamine methyltransferase 1109 56.05 0 1324801..1325751 + 316 158521126 - Dole_1112 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1110 63.54 +1 1325752..1326327 - 191 158521127 - Dole_1113 - transcriptional regulator, TrmB 1111 57.71 0 1326335..1326613 - 92 158521128 - Dole_1114 - HNH endonuclease 1112 59.40 0 1326637..1327476 - 279 158521129 - Dole_1115 - RimK domain-containing protein ATP-grasp 1113 57.89 0 1327473..1328384 - 303 158521130 - Dole_1116 - GTP-binding protein Era 1114 58.08 0 1328388..1328981 - 197 158521131 - Dole_1117 - GTP-binding protein HSR1-related 1115 58.56 0 1329017..1329892 - 291 158521132 - Dole_1118 - ATP phosphoribosyltransferase 1116 56.69 0 1329889..1330269 - 126 158521133 - Dole_1119 - phosphoribosyl-AMP cyclohydrolase 1117 61.66 0 1330447..1331025 + 192 158521134 - Dole_1120 - hypothetical protein 1118 55.43 0 1331047..1331322 + 91 158521135 - Dole_1121 - hypothetical protein 1119 57.97 0 1331452..1332750 + 432 158521136 - Dole_1122 - methyl-accepting chemotaxis sensory transducer 1120 58.38 0 1332788..1333861 + 357 158521137 - Dole_1123 - diguanylate cyclase 1121 59.28 0 1333981..1335144 + 387 158521138 - Dole_1124 - metal-dependent phosphohydrolase 1122 58.40 0 1335323..1335685 + 120 158521139 - Dole_1125 - hypothetical protein 1123 61.64 0 1335747..1338392 + 881 158521140 - Dole_1126 - DNA mismatch repair protein MutS 1124 60.58 0 1338389..1340392 + 667 158521141 - Dole_1127 - N-acetylmuramoyl-L-alanine amidase 1125 48.86 -1 1340919..1341356 - 145 158521142 - Dole_1128 - hypothetical protein 1126 57.62 0 1341686..1342459 - 257 158521143 - Dole_1129 - hypothetical protein 1127 60.44 0 1342463..1343473 - 336 158521144 - Dole_1130 - transketolase central region 1128 59.67 0 1343510..1344352 - 280 158521145 - Dole_1131 - transketolase domain-containing protein 1129 62.11 0 1344365..1345615 - 416 158521146 - Dole_1132 - aminotransferase class-III 1130 58.43 0 1345630..1346394 - 254 158521147 - Dole_1133 - hypothetical protein 1131 61.65 0 1346467..1347582 - 371 158521148 - Dole_1134 - alanine dehydrogenase 1132 52.01 0 1347636..1348256 - 206 158521149 - Dole_1135 - TetR family transcriptional regulator 1133 48.42 -1 1348590..1349636 - 348 158521150 - Dole_1136 - response regulator receiver modulated metal dependent phosphohydrolase 1134 49.71 -1 1352718..1353755 - 345 158521151 - Dole_1138 - diguanylate cyclase 1135 59.06 0 1354055..1355224 + 389 158521152 - Dole_1139 - iron-containing alcohol dehydrogenase 1136 44.76 -1 1355430..1355954 - 174 158521153 - Dole_1140 - hypothetical protein 1137 55.13 0 1356477..1358132 + 551 158521154 - Dole_1141 - carboxylesterase type B 1138 48.63 -1 1358206..1359225 + 339 158521155 - Dole_1142 - hypothetical protein 1139 51.87 0 1359252..1360346 + 364 158521156 - Dole_1143 - lipase chaperone 1140 55.28 0 1360361..1361440 + 359 158521157 - Dole_1144 - alpha/beta hydrolase fold 1141 52.30 0 1361474..1363693 + 739 158521158 - Dole_1145 - glycoside hydrolase family protein 1142 56.68 0 1363894..1364514 + 206 158521159 - Dole_1146 - adenylate kinase-like kinase 1143 59.25 0 1364536..1365627 - 363 158521160 - Dole_1147 - peptidase M48 Ste24p 1144 54.85 0 1365638..1366906 - 422 158521161 - Dole_1148 - hypothetical protein 1145 54.96 0 1366976..1367368 - 130 158521162 - Dole_1149 - response regulator receiver protein 1146 61.64 0 1367376..1368470 - 364 158521163 - Dole_1150 - coenzyme F420 hydrogenase/dehydrogenase beta subunit 1147 58.92 0 1368486..1369415 - 309 158521164 - Dole_1151 - methylenetetrahydrofolate reductase 1148 60.09 0 1369412..1370080 - 222 158521165 - Dole_1152 - hypothetical protein 1149 46.18 -1 1370216..1370713 - 165 158521166 - Dole_1153 - hypothetical protein 1150 35.07 -2 1370970..1372292 - 440 158521167 - Dole_1154 - ankyrin repeat-containing protein 1151 30.47 -2 1372445..1372933 - 162 158521168 - Dole_1155 - hypothetical protein 1152 47.72 -1 1372947..1381832 - 2961 158521169 - Dole_1156 - YD repeat-containing protein 1153 63.46 +1 1382013..1382168 - 51 158521170 - Dole_1157 - methyl-viologen-reducing hydrogenase, delta subunit 1154 62.22 0 1382244..1382513 - 89 158521171 - Dole_1158 - methyl-viologen-reducing hydrogenase delta subunit 1155 61.32 0 1382547..1385555 - 1002 158521172 - Dole_1159 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1156 59.23 0 1385539..1386426 - 295 158521173 - Dole_1160 - CoB--CoM heterodisulfide reductase 1157 59.31 0 1386682..1387293 - 203 158521174 - Dole_1161 - heterodisulfide reductase subunit C-like protein 1158 53.16 0 1387709..1388611 + 300 158521175 - Dole_1162 - phospholipid/glycerol acyltransferase 1159 62.98 +1 1389233..1389991 + 252 158521176 - Dole_1163 - stationary-phase survival protein SurE 1160 62.31 0 1390005..1390967 + 320 158521177 - Dole_1164 - metal dependent phosphohydrolase 1161 64.34 +1 1390967..1391611 + 214 158521178 - Dole_1165 - dTMP kinase 1162 60.15 0 1391756..1394071 + 771 158521179 - Dole_1166 - cysteine synthase 1163 58.83 0 1394081..1395088 + 335 158521180 - Dole_1167 - hypothetical protein 1164 54.50 0 1395242..1395430 + 62 158521181 - Dole_1168 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1165 60.78 0 1395578..1396852 + 424 158521182 - Dole_1169 - iron-sulfur cluster binding protein 1166 56.04 0 1397203..1397757 + 184 158521183 - Dole_1170 - methylated-DNA--protein-cysteine methyltransferase 1167 61.99 0 1397843..1401241 + 1132 158521184 - Dole_1171 - UvrD/REP helicase 1168 54.30 0 1401506..1401877 + 123 158521185 - Dole_1172 - hypothetical protein 1169 55.78 0 1401956..1402543 + 195 158521186 - Dole_1173 - lytic transglycosylase catalytic 1170 62.53 +1 1402723..1403544 + 273 158521187 - Dole_1174 - bacitracin resistance protein BacA 1171 57.74 0 1403654..1404997 + 447 158521188 - Dole_1175 - phosphomannomutase 1172 59.80 0 1405076..1405468 + 130 158521189 - Dole_1176 - putative endoribonuclease L-PSP 1173 58.17 0 1405500..1406123 + 207 158521190 - Dole_1177 - maf protein 1174 57.50 0 1406139..1407458 + 439 158521191 - Dole_1178 - radical SAM domain-containing protein 1175 58.63 0 1407506..1408189 + 227 158521192 - Dole_1179 - alanine racemase domain-containing protein 1176 56.18 0 1408186..1408719 + 177 158521193 - Dole_1180 - hypothetical protein 1177 60.29 0 1408731..1409216 - 161 158521194 - Dole_1181 - hypothetical protein 1178 62.33 0 1409226..1410194 - 322 158521195 - Dole_1182 - 2-nitropropane dioxygenase NPD 1179 56.74 0 1410191..1410724 - 177 158521196 - Dole_1183 - hypothetical protein 1180 57.54 0 1411008..1411478 + 156 158521197 - Dole_1184 - hypothetical protein 1181 50.94 0 1412105..1413013 + 302 158521198 - Dole_1185 - hypothetical protein 1182 55.51 0 1413010..1416603 + 1197 158521199 - Dole_1186 - TPR repeat-containing protein 1183 39.91 -2 1416951..1417406 - 151 158521200 - Dole_1187 - hypothetical protein 1184 58.78 0 1417465..1418910 - 481 158521201 - Dole_1188 - DNA polymerase III delta 1185 61.13 0 1418910..1419686 - 258 158521202 - Dole_1189 - prolipoprotein diacylglyceryl transferase 1186 59.63 0 1419691..1420173 - 160 158521203 - Dole_1190 - lipoprotein signal peptidase 1187 60.36 0 1420200..1422989 - 929 158521204 - Dole_1191 - isoleucyl-tRNA synthetase 1188 60.32 0 1423104..1423844 - 246 158521205 - Dole_1192 - methyltransferase GidB 1189 56.52 0 1423846..1425717 - 623 158521206 - Dole_1193 - acetyl-CoA hydrolase/transferase 1190 59.59 0 1426056..1427171 + 371 158521207 - Dole_1194 - hypothetical protein 1191 60.34 0 1427702..1428649 - 315 158521208 - Dole_1195 - hypothetical protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0