version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 64 48.72 -1 72123..72590 + 155 158520081 - Dole_0064 - hypothetical protein 65 44.97 -1 72623..73765 - 380 158520082 - Dole_0065 - hypothetical protein 66 47.66 -1 73762..74082 - 106 158520083 - Dole_0066 - hypothetical protein 67 52.16 0 75364..75825 - 153 158520084 - Dole_0067 - cyclic nucleotide-binding protein 68 63.13 +1 75864..77306 - 480 158520085 - Dole_0068 - tRNA(Ile)-lysidine synthetase 69 55.66 0 77706..78359 + 217 158520086 - Dole_0069 - GrpE protein 70 58.63 0 78419..80347 + 642 158520087 - Dole_0070 - chaperone protein DnaK 71 59.79 0 80417..80896 + 159 158520088 - Dole_0071 - NADPH-dependent FMN reductase 72 53.64 0 80934..81455 - 173 158520089 - Dole_0072 - hypothetical protein 73 64.71 +1 81514..82383 - 289 158520090 - Dole_0073 - succinyl-CoA synthetase, alpha subunit 74 60.33 0 82431..83597 - 388 158520091 - Dole_0074 - succinyl-CoA synthetase, beta subunit 75 60.26 0 83597..85642 - 681 158520092 - Dole_0075 - hypothetical protein 76 58.87 0 85681..85911 - 76 158520093 - Dole_0076 - hypothetical protein 77 59.52 0 85930..87483 - 517 158520094 - Dole_0077 - carboxyl transferase 78 62.95 +1 87606..88601 - 331 158520095 - Dole_0078 - LAO/AO transport system ATPase 79 61.81 0 88777..90897 - 706 158520096 - Dole_0079 - methylmalonyl-CoA mutase 80 55.39 0 90941..91348 - 135 158520097 - Dole_0080 - glyoxalase/bleomycin resistance protein/dioxygenase 81 60.10 0 91385..92572 - 395 158520098 - Dole_0081 - aspartate aminotransferase 82 56.45 0 92860..93045 + 61 158520099 - Dole_0082 - hypothetical protein 83 63.71 +1 93215..94264 + 349 158520100 - Dole_0083 - queuosine biosynthesis protein 84 63.46 +1 94358..95512 + 384 158520101 - Dole_0084 - queuine tRNA-ribosyltransferase 85 56.16 0 95607..95825 + 72 158520102 - Dole_0085 - NifU domain-containing protein 86 53.33 0 95992..96306 + 104 158520103 - Dole_0086 - ribosomal protein L21 87 60.32 0 96368..96619 + 83 158520104 - Dole_0087 - 50S ribosomal protein L27 88 61.18 0 96616..97617 + 333 158520105 - Dole_0088 - GTP-binding protein Obg/CgtA 89 60.48 0 97607..98737 + 376 158520106 - Dole_0089 - glutamate 5-kinase 90 61.97 0 98775..100031 + 418 158520107 - Dole_0090 - gamma-glutamyl phosphate reductase 91 53.51 0 100059..100727 + 222 158520108 - Dole_0091 - nicotinate (nicotinamide) nucleotide adenylyltransferase 92 54.78 0 100724..101068 + 114 158520109 - Dole_0092 - iojap-like protein 93 51.56 0 101094..102629 + 511 158520110 - Dole_0093 - phosphoglyceromutase 94 37.83 -2 103072..104205 + 377 158520111 - Dole_0094 - DNA polymerase III, beta subunit 95 47.57 -1 104210..106654 + 814 158520112 - Dole_0095 - DNA gyrase, B subunit 96 56.20 0 106651..107988 - 445 158520113 - Dole_0096 - asparaginyl-tRNA synthetase 97 60.35 0 108032..110485 + 817 158520114 - Dole_0097 - radical SAM domain-containing protein 98 57.21 0 110589..112142 + 517 158520115 - Dole_0098 - ribonuclease 99 51.11 0 112349..112483 + 44 158520116 - Dole_0099 - ribosomal protein L34 100 47.54 -1 112621..112986 + 121 158520117 - Dole_0100 - ribonuclease P protein component 101 55.38 0 112986..113180 + 64 158520118 - Dole_0101 - hypothetical protein 102 57.98 0 113359..115038 + 559 158520119 - Dole_0102 - 60 kDa inner membrane insertion protein 103 61.60 0 115053..116078 + 341 158520120 - Dole_0103 - single-stranded nucleic acid binding R3H domain-containing protein 104 66.59 +1 116099..117487 + 462 158520121 - Dole_0104 - tRNA modification GTPase TrmE 105 52.78 0 117620..118303 + 227 158520122 - Dole_0105 - hypothetical protein 106 56.91 0 118300..118668 + 122 158520123 - Dole_0106 - hypothetical protein 107 61.86 0 118655..119527 + 290 158520124 - Dole_0107 - ribosomal L11 methyltransferase 108 56.00 0 119524..120198 + 224 158520125 - Dole_0108 - hypothetical protein 109 57.16 0 120309..121034 - 241 158520126 - Dole_0109 - hypothetical protein 110 55.76 0 121442..121936 + 164 158520127 - Dole_0110 - hypothetical protein 111 57.41 0 121952..122761 + 269 158520128 - Dole_0111 - RimK domain-containing protein ATP-grasp 112 60.21 0 122992..124710 - 572 158520129 - Dole_0112 - AMP-dependent synthetase and ligase 113 60.66 0 124751..126148 - 465 158520130 - Dole_0113 - Propanoyl-CoA C-acyltransferase 114 55.17 0 126600..127382 + 260 158520131 - Dole_0114 - regulatory protein GntR HTH 115 56.87 0 127402..128238 + 278 158520132 - Dole_0115 - short-chain dehydrogenase/reductase SDR 116 59.82 0 128291..129049 + 252 158520133 - Dole_0116 - nitroreductase 117 60.05 0 129053..129430 + 125 158520134 - Dole_0117 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 118 53.85 0 129618..130499 + 293 158520135 - Dole_0118 - hypothetical protein 119 58.77 0 130561..131370 + 269 158520136 - Dole_0119 - GCN5-related N-acetyltransferase 120 60.80 0 131723..132865 + 380 158520137 - Dole_0120 - carbamoyl-phosphate synthase, small subunit 121 61.52 0 132858..136085 + 1075 158520138 - Dole_0121 - carbamoyl-phosphate synthase, large subunit 122 61.82 0 136082..137485 + 467 158520139 - Dole_0122 - amidophosphoribosyltransferase 123 39.16 -2 137939..138916 - 325 158520140 - Dole_0123 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 124 34.45 -2 139017..139463 - 148 158520141 - Dole_0124 - MarR family transcriptional regulator 125 58.24 0 139717..140736 + 339 158520142 - Dole_0125 - hypothetical protein 126 61.76 0 140761..142818 + 685 158520143 - Dole_0126 - formate dehydrogenase 127 50.92 0 143290..143562 + 90 158520144 - Dole_0127 - hypothetical protein 128 58.23 0 143604..144326 + 240 158520145 - Dole_0128 - 1-acylglycerol-3-phosphate O-acyltransferase 129 61.92 0 144424..145266 + 280 158520146 - Dole_0129 - pyrroline-5-carboxylate reductase 130 60.41 0 145259..145945 + 228 158520147 - Dole_0130 - cytochrome c biogenesis protein transmembrane region 131 56.89 0 146077..146526 + 149 158520148 - Dole_0131 - thioredoxin domain-containing protein 132 58.84 0 146529..147116 + 195 158520149 - Dole_0132 - NUDIX hydrolase 133 63.54 +1 147111..147398 - 95 158520150 - Dole_0133 - hypothetical protein 134 55.77 0 147419..147877 - 152 158520151 - Dole_0134 - GCN5-related N-acetyltransferase 135 62.44 +1 148111..150051 - 646 158520152 - Dole_0135 - 1A family penicillin-binding protein 136 57.24 0 150159..150455 + 98 158520153 - Dole_0136 - hypothetical protein 137 61.94 0 150540..151301 + 253 158520154 - Dole_0137 - ATP-grasp domain-containing protein 138 61.19 0 151327..152805 + 492 158520155 - Dole_0138 - CoA-binding domain-containing protein 139 57.36 0 152951..153283 + 110 158520156 - Dole_0139 - Hpt protein 140 57.35 0 153335..154450 + 371 158520157 - Dole_0140 - response regulator receiver protein 141 60.87 0 154594..155076 + 160 158520158 - Dole_0141 - putative anti-sigma regulatory factor, serine/threonine protein kinase 142 60.45 0 155249..156262 + 337 158520159 - Dole_0142 - hypothetical protein 143 60.14 0 156282..157124 + 280 158520160 - Dole_0143 - amidohydrolase 2 144 56.92 0 157358..158896 - 512 158520161 - Dole_0144 - hypothetical protein 145 60.27 0 159138..159731 - 197 158520162 - Dole_0145 - hypothetical protein 146 36.01 -2 159793..160650 - 285 158520163 - Dole_0146 - hypothetical protein 147 48.61 -1 160632..161135 - 167 158520164 - Dole_0147 - hypothetical protein 148 59.74 0 161253..162740 - 495 158520165 - Dole_0148 - transglutaminase domain-containing protein 149 64.47 +1 162933..164750 - 605 158520166 - Dole_0149 - DNA mismatch repair protein MutL 150 59.26 0 164810..164998 - 62 158520167 - Dole_0150 - hypothetical protein 151 63.18 +1 165014..166474 - 486 158520168 - Dole_0151 - glutamyl-tRNA(Gln) amidotransferase, A subunit 152 54.17 0 166507..166794 - 95 158520169 - Dole_0152 - glutamyl-tRNA(Gln) amidotransferase, C subunit 153 59.33 0 166953..168641 + 562 158520170 - Dole_0153 - hypothetical protein 154 55.08 0 168653..169213 - 186 158520171 - Dole_0154 - hypothetical protein 155 58.48 0 169729..172134 + 801 158520172 - Dole_0155 - 3-hydroxyacyl-CoA dehydrogenase NAD-binding 156 61.60 0 172147..173331 + 394 158520173 - Dole_0156 - acetyl-CoA acetyltransferase 157 61.77 0 173580..174560 + 326 158520174 - Dole_0157 - NAD-dependent epimerase/dehydratase 158 54.08 0 174557..175009 + 150 158520175 - Dole_0158 - hypothetical protein 159 50.21 -1 175179..175652 + 157 158520176 - Dole_0159 - UspA domain-containing protein 160 54.81 0 175844..176248 + 134 158520177 - Dole_0160 - UspA domain-containing protein 161 57.88 0 176276..177982 - 568 158520178 - Dole_0161 - TrkA domain-containing protein 162 58.16 0 178152..179702 + 516 158520179 - Dole_0162 - CoA-binding domain-containing protein 163 61.10 0 179699..181978 + 759 158520180 - Dole_0163 - RNA-binding S1 domain-containing protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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