version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1040 58.05 0 1224707..1225588 + 293 158521057 - Dole_1040 - PDZ/DHR/GLGF domain-containing protein 1041 58.38 0 1225639..1228038 + 799 158521058 - Dole_1041 - general secretion pathway protein D 1042 59.08 0 1228042..1229754 + 570 158521059 - Dole_1042 - general secretory pathway protein E 1043 57.79 0 1229751..1230167 + 138 158521060 - Dole_1043 - hypothetical protein 1044 58.41 0 1230184..1231140 + 318 158521061 - Dole_1044 - hypothetical protein 1045 58.05 0 1231217..1232446 - 409 158521062 - Dole_1045 - general secretion pathway protein F 1046 52.88 0 1232505..1232903 - 132 158521063 - Dole_1046 - hypothetical protein 1047 55.72 0 1232942..1234366 - 474 158521064 - Dole_1047 - hypothetical protein 1048 53.37 0 1234654..1237098 - 814 158521065 - Dole_1048 - response regulator receiver protein 1049 58.28 0 1237324..1238313 + 329 158521066 - Dole_1049 - hypothetical protein 1050 59.21 0 1238335..1238991 + 218 158521067 - Dole_1050 - hypothetical protein 1051 53.06 0 1239000..1239359 - 119 158521068 - Dole_1051 - type IV pilus assembly PilZ 1052 58.86 0 1239802..1241517 + 571 158521069 - Dole_1052 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1053 60.82 0 1241570..1242133 + 187 158521070 - Dole_1053 - carboxymuconolactone decarboxylase 1054 61.76 0 1242199..1245456 + 1085 158521071 - Dole_1054 - exodeoxyribonuclease V, gamma subunit 1055 62.57 +1 1245434..1249045 + 1203 158521072 - Dole_1055 - exodeoxyribonuclease V, beta subunit 1056 62.30 0 1249047..1250876 + 609 158521073 - Dole_1056 - exodeoxyribonuclease V, alpha subunit 1057 61.97 0 1250892..1251338 + 148 158521074 - Dole_1057 - RpiB/LacA/LacB family sugar-phosphate isomerase 1058 56.10 0 1251379..1252050 - 223 158521075 - Dole_1058 - CheC, inhibitor of MCP methylation 1059 50.00 -1 1252043..1252426 - 127 158521076 - Dole_1059 - response regulator receiver protein 1060 55.49 0 1252647..1253612 - 321 158521077 - Dole_1060 - peptidase M23B 1061 56.92 0 1253861..1254691 + 276 158521078 - Dole_1061 - temperature sensitive supressor-like protein 1062 53.91 0 1254738..1257002 + 754 158521079 - Dole_1062 - hypothetical protein 1063 57.36 0 1257262..1258443 + 393 158521080 - Dole_1063 - 2-methylcitrate synthase/citrate synthase II 1064 59.10 0 1258794..1260233 + 479 158521081 - Dole_1065 - pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1065 56.18 0 1260226..1261083 + 285 158521082 - Dole_1066 - pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit 1066 42.53 -2 1261223..1261831 - 202 158521083 - Dole_1067 - TetR family transcriptional regulator 1067 51.16 0 1262321..1263436 + 371 158521084 - Dole_1068 - alanine dehydrogenase 1068 47.82 -1 1263456..1264373 + 305 158521085 - Dole_1069 - amidohydrolase 2 1069 53.87 0 1264439..1265821 + 460 158521086 - Dole_1070 - aminotransferase class-III 1070 53.18 0 1265851..1267059 + 402 158521087 - Dole_1071 - aminotransferase class-III 1071 56.49 0 1267101..1267739 + 212 158521088 - Dole_1072 - NADPH-dependent FMN reductase 1072 47.09 -1 1267973..1270480 + 835 158521089 - Dole_1073 - molydopterin dinucleotide-binding region 1073 50.46 -1 1270566..1272719 + 717 158521090 - Dole_1074 - molybdopterin oxidoreductase 1074 42.62 -2 1272716..1273942 + 408 158521091 - Dole_1075 - hypothetical protein 1075 49.68 -1 1274210..1275622 + 470 158521092 - Dole_1076 - amidase 1076 41.18 -2 1275814..1276119 - 101 158521093 - Dole_1077 - hypothetical protein 1077 46.41 -1 1276490..1276879 + 129 158521094 - Dole_1078 - hypothetical protein 1078 54.66 0 1278372..1279562 - 396 158521095 - Dole_1081 - diguanylate cyclase 1079 59.80 0 1280137..1281432 - 431 158521096 - Dole_1082 - hypothetical protein 1080 60.74 0 1281469..1282953 - 494 158521097 - Dole_1083 - hypothetical protein 1081 60.91 0 1283163..1283996 + 277 158521098 - Dole_1084 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 1082 59.32 0 1284240..1284947 + 235 158521099 - Dole_1085 - methyltransferase type 12 1083 57.24 0 1285193..1285966 + 257 158521100 - Dole_1086 - enoyl-CoA hydratase/isomerase 1084 61.35 0 1285985..1288411 - 808 158521101 - Dole_1087 - TPR repeat-containing protein 1085 55.26 0 1288694..1289710 - 338 158521102 - Dole_1088 - hypothetical protein 1086 58.04 0 1289707..1290216 - 169 158521103 - Dole_1089 - hypothetical protein 1087 56.32 0 1290213..1292753 - 846 158521104 - Dole_1090 - response regulator receiver protein 1088 55.27 0 1292870..1293106 - 78 158521105 - Dole_1091 - hypothetical protein 1089 51.99 0 1293113..1293439 - 108 158521106 - Dole_1092 - response regulator receiver protein 1090 58.63 0 1293424..1298589 - 1721 158521107 - Dole_1093 - multi-sensor hybrid histidine kinase 1091 64.65 +1 1298905..1300686 - 593 158521108 - Dole_1094 - TrkA domain-containing protein 1092 52.16 0 1300954..1301718 + 254 158521109 - Dole_1095 - NERD domain-containing protein 1093 49.44 -1 1301718..1304903 + 1061 158521110 - Dole_1096 - ankyrin 1094 59.43 0 1305011..1307236 - 741 158521111 - Dole_1097 - para-aminobenzoate synthase, subunit I 1095 56.13 0 1307241..1307876 - 211 158521112 - Dole_1098 - glutamine amidotransferase of anthranilate synthase 1096 59.41 0 1307995..1310448 - 817 158521113 - Dole_1099 - ATP-dependent protease La 1097 55.41 0 1310517..1310969 - 150 158521114 - Dole_1100 - heat shock protein Hsp20 1098 60.92 0 1311170..1312126 + 318 158521115 - Dole_1101 - hypothetical protein 1099 57.10 0 1312212..1313309 + 365 158521116 - Dole_1102 - hypothetical protein 1100 57.11 0 1313895..1314731 - 278 158521117 - Dole_1103 - cytochrome c assembly protein 1101 58.30 0 1314773..1316146 - 457 158521118 - Dole_1104 - ResB family protein 1102 62.86 +1 1316419..1317258 + 279 158521119 - Dole_1105 - uroporphyrin-III C/tetrapyrrole methyltransferase 1103 57.50 0 1317639..1318892 + 417 158521120 - Dole_1106 - trimethylamine:corrinoid methyltransferase-like protein 1104 58.98 0 1318937..1320550 + 537 158521121 - Dole_1107 - asparagine synthetase B 1105 61.72 0 1320559..1321407 + 282 158521122 - Dole_1108 - hypothetical protein 1106 58.72 0 1321425..1322657 + 410 158521123 - Dole_1109 - trimethylamine:corrinoid methyltransferase-like protein 1107 62.84 +1 1322680..1323306 + 208 158521124 - Dole_1110 - cobalamin B12-binding domain-containing protein 1108 60.39 0 1323353..1324786 + 477 158521125 - Dole_1111 - trimethylamine methyltransferase 1109 56.05 0 1324801..1325751 + 316 158521126 - Dole_1112 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1110 63.54 +1 1325752..1326327 - 191 158521127 - Dole_1113 - transcriptional regulator, TrmB 1111 57.71 0 1326335..1326613 - 92 158521128 - Dole_1114 - HNH endonuclease 1112 59.40 0 1326637..1327476 - 279 158521129 - Dole_1115 - RimK domain-containing protein ATP-grasp 1113 57.89 0 1327473..1328384 - 303 158521130 - Dole_1116 - GTP-binding protein Era 1114 58.08 0 1328388..1328981 - 197 158521131 - Dole_1117 - GTP-binding protein HSR1-related 1115 58.56 0 1329017..1329892 - 291 158521132 - Dole_1118 - ATP phosphoribosyltransferase 1116 56.69 0 1329889..1330269 - 126 158521133 - Dole_1119 - phosphoribosyl-AMP cyclohydrolase 1117 61.66 0 1330447..1331025 + 192 158521134 - Dole_1120 - hypothetical protein 1118 55.43 0 1331047..1331322 + 91 158521135 - Dole_1121 - hypothetical protein 1119 57.97 0 1331452..1332750 + 432 158521136 - Dole_1122 - methyl-accepting chemotaxis sensory transducer 1120 58.38 0 1332788..1333861 + 357 158521137 - Dole_1123 - diguanylate cyclase 1121 59.28 0 1333981..1335144 + 387 158521138 - Dole_1124 - metal-dependent phosphohydrolase 1122 58.40 0 1335323..1335685 + 120 158521139 - Dole_1125 - hypothetical protein 1123 61.64 0 1335747..1338392 + 881 158521140 - Dole_1126 - DNA mismatch repair protein MutS 1124 60.58 0 1338389..1340392 + 667 158521141 - Dole_1127 - N-acetylmuramoyl-L-alanine amidase 1125 48.86 -1 1340919..1341356 - 145 158521142 - Dole_1128 - hypothetical protein 1126 57.62 0 1341686..1342459 - 257 158521143 - Dole_1129 - hypothetical protein 1127 60.44 0 1342463..1343473 - 336 158521144 - Dole_1130 - transketolase central region 1128 59.67 0 1343510..1344352 - 280 158521145 - Dole_1131 - transketolase domain-containing protein 1129 62.11 0 1344365..1345615 - 416 158521146 - Dole_1132 - aminotransferase class-III 1130 58.43 0 1345630..1346394 - 254 158521147 - Dole_1133 - hypothetical protein 1131 61.65 0 1346467..1347582 - 371 158521148 - Dole_1134 - alanine dehydrogenase 1132 52.01 0 1347636..1348256 - 206 158521149 - Dole_1135 - TetR family transcriptional regulator 1133 48.42 -1 1348590..1349636 - 348 158521150 - Dole_1136 - response regulator receiver modulated metal dependent phosphohydrolase 1134 49.71 -1 1352718..1353755 - 345 158521151 - Dole_1138 - diguanylate cyclase 1135 59.06 0 1354055..1355224 + 389 158521152 - Dole_1139 - iron-containing alcohol dehydrogenase 1136 44.76 -1 1355430..1355954 - 174 158521153 - Dole_1140 - hypothetical protein 1137 55.13 0 1356477..1358132 + 551 158521154 - Dole_1141 - carboxylesterase type B 1138 48.63 -1 1358206..1359225 + 339 158521155 - Dole_1142 - hypothetical protein 1139 51.87 0 1359252..1360346 + 364 158521156 - Dole_1143 - lipase chaperone 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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