version 1.0
Candidatus Desulfococcus oleovorans Hxd3, complete genome - 1..3944167 3265 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1000 58.88 0 1173212..1175548 + 778 158521017 - Dole_1000 - methyl-viologen-reducing hydrogenase delta subunit 1001 55.81 0 1175585..1176781 + 398 158521018 - Dole_1001 - heterodisulfide reductase, putative 1002 58.75 0 1177046..1178320 - 424 158521019 - Dole_1002 - sulfate adenylyltransferase 1003 62.25 0 1178563..1181028 + 821 158521020 - Dole_1003 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 1004 57.65 0 1181337..1183532 + 731 158521021 - Dole_1004 - hypothetical protein 1005 56.93 0 1183538..1183876 - 112 158521022 - Dole_1005 - hypothetical protein 1006 57.01 0 1183981..1185243 + 420 158521023 - Dole_1006 - Fe-S oxidoreductase-like protein 1007 61.77 0 1185459..1186193 + 244 158521024 - Dole_1007 - hypothetical protein 1008 53.91 0 1186496..1186840 + 114 158521025 - Dole_1008 - helix-hairpin-helix repeat-containing competence protein ComEA 1009 55.35 0 1186967..1188874 + 635 158521026 - Dole_1009 - polysaccharide biosynthesis protein CapD 1010 57.33 0 1188981..1190030 + 349 158521027 - Dole_1010 - dTDP-glucose 4,6-dehydratase 1011 55.86 0 1190054..1190932 + 292 158521028 - Dole_1011 - glucose-1-phosphate thymidylyltransferase 1012 54.08 0 1190935..1191498 + 187 158521029 - Dole_1012 - dTDP-4-dehydrorhamnose 3,5-epimerase 1013 60.25 0 1191768..1193480 + 570 158521030 - Dole_1013 - sulfate adenylyltransferase 1014 60.19 0 1193509..1194156 - 215 158521031 - Dole_1014 - ABC-type transport system auxiliary component-like protein 1015 58.49 0 1194190..1195155 - 321 158521032 - Dole_1015 - hypothetical protein 1016 55.64 0 1195203..1195964 - 253 158521033 - Dole_1016 - ABC transporter-related protein 1017 58.89 0 1195966..1197123 - 385 158521034 - Dole_1017 - hypothetical protein 1018 55.82 0 1197437..1198681 - 414 158521035 - Dole_1018 - hypothetical protein 1019 58.77 0 1198724..1199926 - 400 158521036 - Dole_1019 - sn-glycerol-3-phosphate dehydrogenase subunit C 1020 60.48 0 1199923..1201263 - 446 158521037 - Dole_1020 - anaerobic glycerol-3-phosphate dehydrogenase subunit B 1021 62.63 +1 1201250..1202908 - 552 158521038 - Dole_1021 - sn-glycerol-3-phosphate dehydrogenase subunit A 1022 51.85 0 1203117..1204952 + 611 158521039 - Dole_1022 - hypothetical protein 1023 49.16 -1 1205070..1206674 - 534 158521040 - Dole_1023 - hypothetical protein 1024 58.23 0 1206807..1207730 - 307 158521041 - Dole_1024 - beta-lactamase domain-containing protein 1025 58.56 0 1207787..1209316 - 509 158521042 - Dole_1025 - hypothetical protein 1026 58.20 0 1209529..1211028 - 499 158521043 - Dole_1026 - sodium:neurotransmitter symporter 1027 55.08 0 1211463..1212506 - 347 158521044 - Dole_1027 - endonuclease/exonuclease/phosphatase 1028 60.89 0 1212746..1214875 - 709 158521045 - Dole_1028 - DEAD/DEAH box helicase domain-containing protein 1029 59.55 0 1214876..1215634 - 252 158521046 - Dole_1029 - cobyrinic acid ac-diamide synthase 1030 62.71 +1 1215813..1217783 + 656 158521047 - Dole_1030 - peptidase U32 1031 51.23 0 1218035..1218319 + 94 158521048 - Dole_1031 - histone family protein DNA-binding protein 1032 56.71 0 1218416..1218877 + 153 158521049 - Dole_1032 - general secretion pathway protein G 1033 59.52 0 1218951..1219538 + 195 158521050 - Dole_1033 - hypothetical protein 1034 60.56 0 1219525..1219950 + 141 158521051 - Dole_1034 - hypothetical protein 1035 60.78 0 1219928..1220641 + 237 158521052 - Dole_1035 - hypothetical protein 1036 58.01 0 1220638..1221723 + 361 158521053 - Dole_1036 - Type II secretory pathway component PulK-like protein 1037 61.53 0 1221777..1223237 + 486 158521054 - Dole_1037 - fimbrial assembly family protein 1038 60.72 0 1223234..1223788 + 184 158521055 - Dole_1038 - hypothetical protein 1039 58.98 0 1223785..1224669 + 294 158521056 - Dole_1039 - hypothetical protein 1040 58.05 0 1224707..1225588 + 293 158521057 - Dole_1040 - PDZ/DHR/GLGF domain-containing protein 1041 58.38 0 1225639..1228038 + 799 158521058 - Dole_1041 - general secretion pathway protein D 1042 59.08 0 1228042..1229754 + 570 158521059 - Dole_1042 - general secretory pathway protein E 1043 57.79 0 1229751..1230167 + 138 158521060 - Dole_1043 - hypothetical protein 1044 58.41 0 1230184..1231140 + 318 158521061 - Dole_1044 - hypothetical protein 1045 58.05 0 1231217..1232446 - 409 158521062 - Dole_1045 - general secretion pathway protein F 1046 52.88 0 1232505..1232903 - 132 158521063 - Dole_1046 - hypothetical protein 1047 55.72 0 1232942..1234366 - 474 158521064 - Dole_1047 - hypothetical protein 1048 53.37 0 1234654..1237098 - 814 158521065 - Dole_1048 - response regulator receiver protein 1049 58.28 0 1237324..1238313 + 329 158521066 - Dole_1049 - hypothetical protein 1050 59.21 0 1238335..1238991 + 218 158521067 - Dole_1050 - hypothetical protein 1051 53.06 0 1239000..1239359 - 119 158521068 - Dole_1051 - type IV pilus assembly PilZ 1052 58.86 0 1239802..1241517 + 571 158521069 - Dole_1052 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 1053 60.82 0 1241570..1242133 + 187 158521070 - Dole_1053 - carboxymuconolactone decarboxylase 1054 61.76 0 1242199..1245456 + 1085 158521071 - Dole_1054 - exodeoxyribonuclease V, gamma subunit 1055 62.57 +1 1245434..1249045 + 1203 158521072 - Dole_1055 - exodeoxyribonuclease V, beta subunit 1056 62.30 0 1249047..1250876 + 609 158521073 - Dole_1056 - exodeoxyribonuclease V, alpha subunit 1057 61.97 0 1250892..1251338 + 148 158521074 - Dole_1057 - RpiB/LacA/LacB family sugar-phosphate isomerase 1058 56.10 0 1251379..1252050 - 223 158521075 - Dole_1058 - CheC, inhibitor of MCP methylation 1059 50.00 -1 1252043..1252426 - 127 158521076 - Dole_1059 - response regulator receiver protein 1060 55.49 0 1252647..1253612 - 321 158521077 - Dole_1060 - peptidase M23B 1061 56.92 0 1253861..1254691 + 276 158521078 - Dole_1061 - temperature sensitive supressor-like protein 1062 53.91 0 1254738..1257002 + 754 158521079 - Dole_1062 - hypothetical protein 1063 57.36 0 1257262..1258443 + 393 158521080 - Dole_1063 - 2-methylcitrate synthase/citrate synthase II 1064 59.10 0 1258794..1260233 + 479 158521081 - Dole_1065 - pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 1065 56.18 0 1260226..1261083 + 285 158521082 - Dole_1066 - pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit 1066 42.53 -2 1261223..1261831 - 202 158521083 - Dole_1067 - TetR family transcriptional regulator 1067 51.16 0 1262321..1263436 + 371 158521084 - Dole_1068 - alanine dehydrogenase 1068 47.82 -1 1263456..1264373 + 305 158521085 - Dole_1069 - amidohydrolase 2 1069 53.87 0 1264439..1265821 + 460 158521086 - Dole_1070 - aminotransferase class-III 1070 53.18 0 1265851..1267059 + 402 158521087 - Dole_1071 - aminotransferase class-III 1071 56.49 0 1267101..1267739 + 212 158521088 - Dole_1072 - NADPH-dependent FMN reductase 1072 47.09 -1 1267973..1270480 + 835 158521089 - Dole_1073 - molydopterin dinucleotide-binding region 1073 50.46 -1 1270566..1272719 + 717 158521090 - Dole_1074 - molybdopterin oxidoreductase 1074 42.62 -2 1272716..1273942 + 408 158521091 - Dole_1075 - hypothetical protein 1075 49.68 -1 1274210..1275622 + 470 158521092 - Dole_1076 - amidase 1076 41.18 -2 1275814..1276119 - 101 158521093 - Dole_1077 - hypothetical protein 1077 46.41 -1 1276490..1276879 + 129 158521094 - Dole_1078 - hypothetical protein 1078 54.66 0 1278372..1279562 - 396 158521095 - Dole_1081 - diguanylate cyclase 1079 59.80 0 1280137..1281432 - 431 158521096 - Dole_1082 - hypothetical protein 1080 60.74 0 1281469..1282953 - 494 158521097 - Dole_1083 - hypothetical protein 1081 60.91 0 1283163..1283996 + 277 158521098 - Dole_1084 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 1082 59.32 0 1284240..1284947 + 235 158521099 - Dole_1085 - methyltransferase type 12 1083 57.24 0 1285193..1285966 + 257 158521100 - Dole_1086 - enoyl-CoA hydratase/isomerase 1084 61.35 0 1285985..1288411 - 808 158521101 - Dole_1087 - TPR repeat-containing protein 1085 55.26 0 1288694..1289710 - 338 158521102 - Dole_1088 - hypothetical protein 1086 58.04 0 1289707..1290216 - 169 158521103 - Dole_1089 - hypothetical protein 1087 56.32 0 1290213..1292753 - 846 158521104 - Dole_1090 - response regulator receiver protein 1088 55.27 0 1292870..1293106 - 78 158521105 - Dole_1091 - hypothetical protein 1089 51.99 0 1293113..1293439 - 108 158521106 - Dole_1092 - response regulator receiver protein 1090 58.63 0 1293424..1298589 - 1721 158521107 - Dole_1093 - multi-sensor hybrid histidine kinase 1091 64.65 +1 1298905..1300686 - 593 158521108 - Dole_1094 - TrkA domain-containing protein 1092 52.16 0 1300954..1301718 + 254 158521109 - Dole_1095 - NERD domain-containing protein 1093 49.44 -1 1301718..1304903 + 1061 158521110 - Dole_1096 - ankyrin 1094 59.43 0 1305011..1307236 - 741 158521111 - Dole_1097 - para-aminobenzoate synthase, subunit I 1095 56.13 0 1307241..1307876 - 211 158521112 - Dole_1098 - glutamine amidotransferase of anthranilate synthase 1096 59.41 0 1307995..1310448 - 817 158521113 - Dole_1099 - ATP-dependent protease La 1097 55.41 0 1310517..1310969 - 150 158521114 - Dole_1100 - heat shock protein Hsp20 1098 60.92 0 1311170..1312126 + 318 158521115 - Dole_1101 - hypothetical protein 1099 57.10 0 1312212..1313309 + 365 158521116 - Dole_1102 - hypothetical protein 56.47 MEAN 5.93 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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