version 1.0
Burkholderia pseudomallei 1106a chromosome II, complete sequence - 1..3100794 3164 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1989 79.17 +1 1966451..1966714 - 87 126456507 - BURPS1106A_A1998 - hypothetical protein 1990 73.27 0 1966737..1968206 - 489 126457078 - BURPS1106A_A1999 - mannitol dehydrogenase family protein 1991 70.39 0 1968382..1969107 + 241 126458590 - BURPS1106A_A2000 - GntR family transcriptional regulator 1992 68.57 0 1969129..1970337 + 402 126456057 rspA BURPS1106A_A2001 - starvation sensing protein RspA 1993 69.67 0 1970386..1971417 + 343 126456837 - BURPS1106A_A2002 - putative dehydrogenase 1994 66.13 0 1972367..1972552 + 61 126455496 - BURPS1106A_A2004 - hypothetical protein 1995 74.06 0 1972638..1973543 + 301 126456189 - BURPS1106A_A2005 - hypothetical protein 1996 70.29 0 1974135..1974989 + 284 126456858 nadE BURPS1106A_A2006 - NAD synthetase 1997 73.78 0 1975244..1976269 - 341 126457571 - BURPS1106A_A2007 - TetR family transcriptional regulator 1998 69.95 0 1976381..1977598 + 405 126458250 - BURPS1106A_A2008 - hypothetical protein 1999 67.73 0 1977595..1978443 + 282 126458395 - BURPS1106A_A2009 - hypothetical protein 2000 66.67 0 1978489..1978929 + 146 126457714 - BURPS1106A_A2010 - hypothetical protein 2001 65.61 0 1979086..1979274 - 62 126457069 - BURPS1106A_A2011 - hypothetical protein 2002 68.99 0 1979336..1980886 + 516 126457765 nirK BURPS1106A_A2012 - nitrite reductase, copper-containing 2003 72.16 0 1980911..1981747 + 278 126455580 - BURPS1106A_A2013 - hypothetical protein 2004 69.27 0 1981744..1982358 + 204 126456996 - BURPS1106A_A2014 - SCO1/SenC family protein 2005 65.87 0 1983004..1983129 - 41 126455855 - BURPS1106A_A2015 - hypothetical protein 2006 61.67 -1 1983119..1983298 - 59 126458374 - BURPS1106A_A2016 - hypothetical protein 2007 69.49 0 1983396..1984421 + 341 126456376 - BURPS1106A_A2018 - putative N-acetylmuramoyl-L-alanine amidase 2008 77.19 +1 1984418..1984531 - 37 126457079 - BURPS1106A_A2017 - hypothetical protein 2009 68.45 0 1984549..1985949 + 466 126456936 - BURPS1106A_A2019 - hypothetical protein 2010 69.99 0 1986140..1987522 + 460 126456219 bimA BURPS1106A_A2020 - intracellular motility protein A 2011 71.43 0 1987602..1987979 + 125 126458191 - BURPS1106A_A2021 - putative lipoprotein 2012 72.01 0 1988222..1990093 - 623 126457583 - BURPS1106A_A2022 - ImpA-related N-terminal family protein 2013 66.26 0 1990084..1990821 - 245 126456477 - BURPS1106A_A2023 - DNA-binding response regulator 2014 72.79 0 1990818..1992662 - 614 126456061 - BURPS1106A_A2024 - sensor histidine kinase 2015 65.25 0 1992922..1993416 + 164 126455594 - BURPS1106A_A2025 - hypothetical protein 2016 64.00 0 1993440..1994939 + 499 126456298 - BURPS1106A_A2026 - hypothetical protein 2017 56.27 -1 1995159..1995668 + 169 126457376 - BURPS1106A_A2027 - hcp protein 2018 70.13 0 1995661..1996122 + 153 126458109 - BURPS1106A_A2028 - hypothetical protein 2019 72.58 0 1996159..1997901 + 580 126456422 - BURPS1106A_A2029 - hypothetical protein 2020 73.35 0 1997865..1998911 + 348 126458585 - BURPS1106A_A2030 - hypothetical protein 2021 73.05 0 1998898..2001954 + 1018 126458158 - BURPS1106A_A2031 - ATP-dependent Clp protease, ATP-binding subunit ClpB 2022 69.25 0 2001981..2005004 + 1007 126457275 - BURPS1106A_A2032 - Rhs element Vgr protein 2023 75.59 +1 2005030..2007663 + 877 126455886 - BURPS1106A_A2033 - pentapeptide repeat-containing protein 2024 72.68 0 2007681..2008745 + 354 126457678 - BURPS1106A_A2034 - pentapeptide repeat-containing protein 2025 78.09 +1 2008859..2009497 + 212 126457932 - BURPS1106A_A2035 - hypothetical protein 2026 67.18 0 2009526..2009918 + 130 126455497 - BURPS1106A_A2036 - hypothetical protein 2027 73.68 0 2009928..2010725 + 265 126456151 - BURPS1106A_A2037 - hypothetical protein 2028 71.55 0 2010722..2012155 + 477 126456857 - BURPS1106A_A2038 - hypothetical protein 2029 72.52 0 2012152..2012817 + 221 126457277 - BURPS1106A_A2039 - hypothetical protein 2030 74.76 +1 2012829..2016833 + 1334 126458165 - BURPS1106A_A2040 - hypothetical protein 2031 58.67 -1 2016849..2016998 + 49 126456234 - BURPS1106A_A2041 - hypothetical protein 2032 64.52 0 2017002..2017187 - 61 126456758 - BURPS1106A_A2042 - hypothetical protein 2033 74.27 +1 2017683..2017853 - 56 126457716 - BURPS1106A_A2043 - hypothetical protein 2034 64.68 0 2017927..2018781 + 284 126457393 - BURPS1106A_A2045 - hypothetical protein 2035 66.67 0 2018741..2018986 - 81 126458368 - BURPS1106A_A2044 - hypothetical protein 2036 55.83 -1 2018999..2019118 - 39 126456345 - BURPS1106A_A2046 - hypothetical protein 2037 51.96 -2 2019189..2019392 - 67 126455574 - BURPS1106A_A2047 - hypothetical protein 2038 52.85 -2 2019454..2019576 + 40 126458458 - BURPS1106A_A2048 - hypothetical protein 2039 54.80 -2 2019480..2019875 + 131 126455897 - BURPS1106A_A2050 - putative GTP cyclohydrolase I 2040 51.45 -2 2019865..2020002 - 45 126456930 - BURPS1106A_A2049 - hypothetical protein 2041 62.15 0 2020025..2020312 + 95 126458380 - BURPS1106A_A2051 - ChnZ 2042 52.88 -2 2020936..2022480 - 514 126458061 - BURPS1106A_A2052 - hypothetical protein 2043 48.53 -2 2022497..2022700 - 67 126456952 - BURPS1106A_A2053 - hypothetical protein 2044 49.24 -2 2022815..2022946 + 43 126457801 - BURPS1106A_A2054 - hypothetical protein 2045 64.05 0 2023025..2023177 - 50 126456208 - BURPS1106A_A2055 - transposase 2046 66.01 0 2023129..2023281 - 50 126458504 - BURPS1106A_A2056 - hypothetical protein 2047 61.36 -1 2024131..2024262 - 43 126456490 - BURPS1106A_A2057 - hypothetical protein 2048 71.10 0 2024297..2025289 - 330 126455829 - BURPS1106A_A2058 - AraC family transcriptional regulator 2049 73.58 0 2025548..2025706 - 52 126455842 - BURPS1106A_A2059 - hypothetical protein 2050 82.10 +2 2025752..2025913 + 53 126457234 - BURPS1106A_A2061 - hypothetical protein 2051 65.77 0 2025885..2026328 - 147 126457879 - BURPS1106A_A2060 - hypothetical protein 2052 69.77 0 2026566..2027210 - 214 126456927 - BURPS1106A_A2062 - LuxR family DNA-binding response regulator 2053 66.89 0 2027473..2027928 - 151 126457281 - BURPS1106A_A2063 - CesT family type III secretion chaperone 2054 64.55 0 2027917..2028105 + 62 126456461 - BURPS1106A_A2065 - hypothetical protein 2055 67.84 0 2028080..2029618 - 512 126456466 icsB BURPS1106A_A2064 - virulence protein IcsB 2056 73.29 0 2029683..2030150 + 155 126457193 - BURPS1106A_A2066 - hypothetical protein 2057 68.83 0 2030244..2031029 + 261 126457906 - BURPS1106A_A2067 - putative guanine nucleotide exchange factor sopE 2058 71.63 0 2031544..2032107 - 187 126456238 bapC BURPS1106A_A2068 - BapC protein 2059 72.70 0 2032104..2032385 - 93 126456223 acpP BURPS1106A_A2069 - acyl carrier protein 2060 74.99 +1 2032382..2035036 - 884 126456769 - BURPS1106A_A2070 - hypothetical protein 2061 64.74 0 2035136..2036068 - 310 126457493 - BURPS1106A_A2071 - type III effector protein IpaD/SipD/SspD 2062 67.01 0 2036130..2036420 - 96 126458379 - BURPS1106A_A2072 - H-NS histone family protein 2063 71.56 0 2036554..2037819 - 421 126456098 - BURPS1106A_A2073 - IpaC/SipC family type III secretion target protein 2064 69.78 0 2037855..2039717 - 620 126458255 bipB BURPS1106A_A2074 - BipB protein 2065 65.31 0 2039736..2040251 - 171 126458467 - BURPS1106A_A2075 - type III secretion, low calcium response chaperone LcrH/SycD 2066 68.61 0 2040377..2041612 - 411 126455636 - BURPS1106A_A2076 - surface presentation of antigens protein SpaS 2067 68.82 0 2041616..2042359 - 247 126456666 - BURPS1106A_A2077 - type III secretion protein SpaR/YscT/HrcT 2068 65.88 0 2042405..2042659 - 84 126457838 - BURPS1106A_A2078 - HrpO family type III secretion protein 2069 62.56 0 2042695..2043375 - 226 126458099 spaP BURPS1106A_A2079 - surface presentation of antigens protein SpaP 2070 74.28 +1 2043365..2044336 - 323 126458287 - BURPS1106A_A2080 - type III secretion system apparatus protein YscQ/HrcQ 2071 78.12 +1 2044333..2045598 - 421 126456346 bsaU BURPS1106A_A2081 - BsaU protein 2072 74.41 +1 2045576..2046040 - 154 126457418 bsaT BURPS1106A_A2082 - BsaT protein 2073 72.78 0 2046037..2047344 - 435 126457578 - BURPS1106A_A2083 - ATP synthase SpaL 2074 66.91 0 2047341..2047748 - 135 126457257 - BURPS1106A_A2084 - type III secretion system protein 2075 66.38 0 2047760..2049832 - 690 126456217 - BURPS1106A_A2085 - HrcV family type III secretion protein 2076 74.42 +1 2049868..2050989 - 373 126455484 - BURPS1106A_A2086 - type III secretion regulator YopN/LcrE/InvE/MxiC 2077 70.39 0 2050986..2052863 - 625 126457615 - BURPS1106A_A2087 - YscC/HrcC family type III secretion outer membrane protein 2078 66.37 0 2052875..2053540 - 221 126458488 - BURPS1106A_A2088 - AraC family transcriptional regulator 2079 48.48 -2 2053617..2053748 + 43 126455678 - BURPS1106A_A2089 - hypothetical protein 2080 57.84 -1 2053827..2054030 + 67 126456508 - BURPS1106A_A2090 - hypothetical protein 2081 69.85 0 2054027..2055313 + 428 126457081 - BURPS1106A_A2091 - type III secretion system protein PrgH/EprH 2082 58.89 -1 2055310..2055579 + 89 126457966 yscF BURPS1106A_A2092 - type III secretion system needle protein 2083 64.36 0 2055639..2055941 + 100 126455755 - BURPS1106A_A2093 - putative type III secretion system protein 2084 71.20 0 2055946..2056893 + 315 126456880 - BURPS1106A_A2094 - YscJ/HrcJ family type III secretion apparatus lipoprotein 2085 72.80 0 2056875..2057477 + 200 126455910 - BURPS1106A_A2095 - type III secretion apparatus protein OrgA/MxiK 2086 74.20 +1 2057446..2058228 + 260 126458324 - BURPS1106A_A2096 - HrpE/YscL family type III secretion apparatus protein 2087 65.67 0 2058191..2058391 + 66 126457729 - BURPS1106A_A2097 - hypothetical protein 2088 66.91 0 2058546..2058950 + 134 126455604 - BURPS1106A_A2098 - hypothetical protein 67.97 MEAN 6.10 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0