version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 918 59.88 -1 906290..906613 + 107 126452039 - BURPS1106A_0922 - hypothetical protein 919 63.80 0 906842..907120 - 92 126453217 rpsT BURPS1106A_0923 - 30S ribosomal protein S20 920 66.39 0 907297..909075 + 592 126454372 mviN BURPS1106A_0924 - integral membrane protein MviN 921 68.21 0 909085..909927 + 280 126454496 - BURPS1106A_0925 - hypothetical protein 922 68.54 0 910196..911155 - 319 126451637 - BURPS1106A_0926 - short chain dehydrogenase/reductase family oxidoreductase 923 65.31 0 911152..911814 - 220 126452690 adk BURPS1106A_0927 - adenylate kinase 924 70.45 0 912023..912814 - 263 126453920 kdsB BURPS1106A_0928 - 3-deoxy-manno-octulosonate cytidylyltransferase 925 67.63 0 912988..913194 - 68 126454062 - BURPS1106A_0929 - hypothetical protein 926 73.65 +1 913175..914305 - 376 126453033 lpxK BURPS1106A_0930 - tetraacyldisaccharide 4'-kinase 927 64.07 0 914436..914666 - 76 126451813 - BURPS1106A_0931 - hypothetical protein 928 73.90 +1 914661..916043 + 460 126455268 xseA BURPS1106A_0932 - exodeoxyribonuclease VII large subunit 929 62.18 -1 916240..916818 + 192 126454128 sodB BURPS1106A_0933 - superoxide dismutase (Fe) 930 66.18 0 916983..917189 + 68 126453553 - BURPS1106A_0934 - hypothetical protein 931 66.91 0 917307..918521 + 404 126452364 - BURPS1106A_0935 - hypothetical protein 932 74.03 +1 918620..918877 + 85 126451801 - BURPS1106A_0936 - hypothetical protein 933 74.54 +1 919263..920468 - 401 126454677 - BURPS1106A_0937 - chromate transporter 934 70.24 0 920702..921457 - 251 126453994 - BURPS1106A_0938 - cyclic nucleotide-binding protein 935 70.27 0 921542..922069 + 175 126452824 - BURPS1106A_0939 - hypothetical protein 936 73.80 +1 922085..923107 + 340 126455021 panE BURPS1106A_0940 - 2-dehydropantoate 2-reductase 937 64.39 0 923260..923391 - 43 126452751 - BURPS1106A_0941 - hypothetical protein 938 72.44 0 923647..924252 + 201 126452729 - BURPS1106A_0942 - hypothetical protein 939 69.50 0 924363..925631 - 422 126453626 - BURPS1106A_0943 - cyclic diguanylate phosphodiesterase 940 77.04 +1 925692..925826 + 44 126454561 - BURPS1106A_0944 - hypothetical protein 941 67.15 0 926289..927728 - 479 126452379 - BURPS1106A_0945 - DHA2 family drug:H+ antiporter-1 942 73.51 +1 928025..928360 + 111 126453301 - BURPS1106A_0947 - hypothetical protein 943 75.83 +1 928333..929685 - 450 126452427 - BURPS1106A_0946 - citrate synthase family protein 944 76.39 +1 929826..929969 - 47 126454029 - BURPS1106A_0948 - hypothetical protein 945 72.81 0 929977..930432 + 151 126454629 - BURPS1106A_0950 - hypothetical protein 946 65.46 0 930402..931148 - 248 126451927 - BURPS1106A_0949 - GntR family transcriptional regulator 947 69.03 0 931317..932162 + 281 126452797 - BURPS1106A_0952 - aldo/keto reductase family oxidoreductase 948 71.35 0 932122..932505 - 127 126453897 - BURPS1106A_0951 - hypothetical protein 949 71.19 0 932502..933164 - 220 126452149 - BURPS1106A_0953 - hypothetical protein 950 71.74 0 933122..935347 - 741 126454432 - BURPS1106A_0954 - hypothetical protein 951 76.59 +1 935320..935571 + 83 126453124 - BURPS1106A_0955 - hypothetical protein 952 66.08 0 935691..938096 - 801 126454785 fusA BURPS1106A_0956 - elongation factor G 953 67.06 0 938103..938612 - 169 126453857 - BURPS1106A_0957 - hypothetical protein 954 73.23 +1 939285..939863 - 192 126453501 - BURPS1106A_0958 - RNA pseudouridine synthase family protein 955 62.06 -1 940131..941390 + 419 126453346 icd BURPS1106A_0960 - isocitrate dehydrogenase 956 64.48 0 941363..941545 - 60 126452842 - BURPS1106A_0959 - hypothetical protein 957 70.95 0 941558..943168 + 536 126453660 - BURPS1106A_0961 - multicopper oxidase family protein 958 53.43 -2 943298..943501 - 67 126453970 - BURPS1106A_0962 - cold shock protein 959 56.51 -2 944034..944348 + 104 126455350 clpS BURPS1106A_0963 - ATP-dependent Clp protease adaptor protein ClpS 960 64.93 0 944345..946645 + 766 126452761 clpA BURPS1106A_0964 - ATP-dependent Clp protease ATP-binding subunit ClpA 961 66.74 0 946745..948121 + 458 126453093 - BURPS1106A_0965 - amino acid permease 962 71.77 0 948194..948937 + 247 126453919 - BURPS1106A_0966 - hypothetical protein 963 65.64 0 949102..949884 + 260 126454774 - BURPS1106A_0967 - hypothetical protein 964 68.90 0 949973..950419 - 148 126451592 dut BURPS1106A_0968 - deoxyuridine 5'-triphosphate nucleotidohydrolase 965 69.47 0 950483..951694 - 403 126452551 coaBC BURPS1106A_0969 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 966 66.47 0 951756..952256 - 166 126453443 lspA BURPS1106A_0970 - signal peptidase II 967 66.77 0 952256..955093 - 945 126452873 ileS BURPS1106A_0971 - isoleucyl-tRNA synthetase 968 71.30 0 955205..956197 - 330 126452288 bimA BURPS1106A_0972 - bifunctional riboflavin kinase/FMN adenylyltransferase 969 69.53 0 956322..956984 + 220 126454710 purN BURPS1106A_0973 - phosphoribosylglycinamide formyltransferase 970 70.70 0 956981..958243 + 420 126454034 sun BURPS1106A_0974 - rRNA small subunit methyltransferase B 971 70.66 0 958255..959607 + 450 126452978 - BURPS1106A_0975 - small conductance mechanosensitive ion channel (MscS) family protein 972 63.83 0 959804..961000 + 398 126452903 - BURPS1106A_0976 - fatty acid desaturase family protein 973 63.77 0 961037..961174 - 45 126451803 - BURPS1106A_0977 - hypothetical protein 974 67.55 0 961169..962305 + 378 126451762 nadA BURPS1106A_0978 - quinolinate synthetase 975 70.06 0 962302..963186 + 294 126454043 nadC BURPS1106A_0979 - nicotinate-nucleotide pyrophosphorylase 976 75.80 +1 963188..963406 + 72 126454503 - BURPS1106A_0981 - hypothetical protein 977 67.54 0 963378..965090 - 570 126454473 nadB BURPS1106A_0980 - L-aspartate oxidase 978 53.57 -2 965147..965314 - 55 126453616 rpmG BURPS1106A_0982 - 50S ribosomal protein L33 979 60.68 -1 965332..965565 - 77 126452424 rpmB BURPS1106A_0983 - 50S ribosomal protein L28 980 74.07 +1 965859..966695 - 278 126455030 radC BURPS1106A_0984 - DNA repair protein RadC 981 65.13 0 966834..967289 + 151 126455033 fkpB BURPS1106A_0985 - peptidyl-prolyl cis-trans isomerase, FKBP-type 982 68.20 0 967292..968272 + 326 126454143 ispH BURPS1106A_0986 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 983 62.50 0 968418..969521 + 367 126452273 - BURPS1106A_0987 - transposase, IS4 984 73.21 +1 969918..970406 + 162 126451663 - BURPS1106A_0988 - hypothetical protein 985 64.77 0 970629..971579 + 316 126453328 - BURPS1106A_0989 - hydrophobic amino acid ABC transporter permease/ATP-binding protein 986 66.24 0 971590..972759 + 389 126454057 - BURPS1106A_0990 - hydrophobic amino acid ABC transporter permease/ATP-binding protein 987 64.73 0 972822..973595 + 257 126453383 - BURPS1106A_0991 - hydrophobic amino acid ABC transporter ATP-binding protein 988 64.71 0 973595..974311 + 238 126452269 - BURPS1106A_0992 - hydrophobic amino acid ABC transporter ATP-binding protein 989 69.60 0 974356..974628 + 90 126452244 - BURPS1106A_0993 - hypothetical protein 990 65.17 0 974625..975293 + 222 126454715 - BURPS1106A_0994 - hypothetical protein 991 72.61 0 975466..975936 - 156 126453563 - BURPS1106A_0995 - putative acetyltransferase 992 66.50 0 975941..977125 - 394 126452494 argD BURPS1106A_0996 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 993 67.05 0 977402..978433 - 343 126454941 - BURPS1106A_0997 - CDP-6-deoxy-delta-3,4-glucoseen reductase 994 71.94 0 978462..979541 + 359 126452148 - BURPS1106A_0999 - NAD-dependent epimerase/dehydratase family protein 995 58.85 -1 979534..979725 - 63 126453803 - BURPS1106A_0998 - hypothetical protein 996 69.16 0 979839..980561 - 240 126454957 - BURPS1106A_1000 - RNA pseudouridine synthase family protein 997 70.16 0 980703..981074 + 123 126454378 - BURPS1106A_1001 - putative copper resistance protein CopC 998 68.64 0 981086..982048 - 320 126453248 - BURPS1106A_1002 - LysR family transcriptional regulator 999 72.69 0 982250..983146 - 298 126452612 - BURPS1106A_1003 - LysR family transcriptional regulator 1000 72.46 0 983268..984164 + 298 126451500 - BURPS1106A_1004 - alpha/beta fold family hydrolase 1001 69.71 0 984418..985107 - 229 126454115 - BURPS1106A_1005 - MOSC domain-containing protein 1002 70.35 0 985122..986018 - 298 126454975 - BURPS1106A_1006 - putative dihydrodipicolinate synthase 1003 68.45 0 986100..986882 - 260 126452376 - BURPS1106A_1007 - hypothetical protein 1004 63.65 0 987014..987577 + 187 126453277 - BURPS1106A_1008 - DNA-binding protein 1005 70.65 0 987676..987876 + 66 126453597 - BURPS1106A_1009 - hypothetical protein 1006 69.49 0 988363..988539 - 58 126452127 - BURPS1106A_1011 - hypothetical protein 1007 64.54 0 988698..989639 - 313 126453673 cysB BURPS1106A_1012 - transcriptional regulator CysB-like protein 1008 65.60 0 989859..991538 + 559 126454547 - BURPS1106A_1013 - sulfite reductase, ferredoxin subunit 1009 70.90 0 991563..992105 + 180 126452080 - BURPS1106A_1014 - hypothetical protein 1010 69.73 0 992102..992851 + 249 126453333 - BURPS1106A_1015 - phosphoadenosine phosphosulfate reductase 1011 68.22 0 992932..993897 + 321 126453969 cysD BURPS1106A_1016 - sulfate adenylyltransferase subunit 2 1012 66.82 0 993920..995236 + 438 126455060 cysN BURPS1106A_1017 - sulfate adenylyltransferase, large subunit 1013 73.39 +1 995296..996069 + 257 126451772 cobA BURPS1106A_1018 - uroporphyrin-III C-methyltransferase 1014 71.83 0 996280..996666 - 128 126452902 - BURPS1106A_1019 - putative sirohydrochlorin cobaltochelatase CbiX 1015 63.63 0 996698..997849 - 383 126453481 - BURPS1106A_1020 - hypothetical protein 1016 64.48 0 997853..998950 - 365 126453581 - BURPS1106A_1021 - hypothetical protein 1017 67.46 0 999071..1000582 + 503 126452701 pepA BURPS1106A_1022 - leucyl aminopeptidase 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0