version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 880 74.77 +1 867013..868209 + 398 126452693 - BURPS1106A_0884 - putative esterase 881 76.16 +1 868206..869417 + 403 126453044 - BURPS1106A_0885 - major facilitator family transporter 882 71.20 0 869579..870526 - 315 126451833 - BURPS1106A_0886 - putative transcriptional regulator 883 74.70 +1 870613..872094 - 493 126454717 xylB BURPS1106A_0887 - xylulokinase 884 72.49 0 872205..873647 - 480 126454266 - BURPS1106A_0888 - mannitol dehydrogenase family protein 885 71.58 0 873819..874835 - 338 126453253 - BURPS1106A_0889 - LysR family transcriptional regulator 886 73.33 +1 874834..876453 + 539 126452093 mdlC BURPS1106A_0890 - benzoylformate decarboxylase 887 73.07 +1 876589..878040 + 483 126452957 - BURPS1106A_0891 - putative vanillin dehydrogenase 888 73.98 +1 878045..879001 + 318 126452512 panE BURPS1106A_0892 - 2-dehydropantoate 2-reductase 889 70.37 0 879482..879670 - 62 126455440 - BURPS1106A_0893 - hypothetical protein 890 74.02 +1 879680..881134 + 484 126454908 - BURPS1106A_0894 - major facilitator family transporter 891 69.40 0 881160..882221 - 353 126452072 kynA BURPS1106A_0895 - tryptophan 2,3-dioxygenase 892 70.58 0 882179..883429 - 416 126452656 kynU BURPS1106A_0896 - kynureninase 893 70.37 0 883471..884199 - 242 126453611 kynB BURPS1106A_0897 - arylformamidase 894 65.08 0 884242..884745 + 167 126452736 - BURPS1106A_0899 - AsnC family transcriptional regulator 895 66.47 0 884732..885247 - 171 126451696 - BURPS1106A_0898 - flavin reductase family protein 896 68.67 0 885280..886179 + 299 126454402 msrA BURPS1106A_0900 - methionine-S-sulfoxide reductase 897 79.67 +2 886290..886412 + 40 126455086 - BURPS1106A_0901 - hypothetical protein 898 73.51 +1 886536..888113 - 525 126452128 - BURPS1106A_0902 - hypothetical protein 899 64.46 0 888140..889360 - 406 126451741 cfa BURPS1106A_0903 - cyclopropane-fatty-acyl-phospholipid synthase 900 68.84 0 889492..890136 - 214 126452524 pdxH BURPS1106A_0904 - pyridoxamine 5'-phosphate oxidase 901 70.36 0 890270..891136 + 288 126453730 - BURPS1106A_0905 - HesA/MoeB/ThiF family protein 902 69.96 0 891409..892257 - 282 126453155 - BURPS1106A_0906 - thioredoxin 903 72.56 0 892311..893192 - 293 126454244 - BURPS1106A_0907 - pirin domain-containing protein 904 70.51 0 893377..894261 + 294 126453908 - BURPS1106A_0908 - putative transporter 905 70.71 0 894400..894597 + 65 126452038 - BURPS1106A_0909 - hypothetical protein 906 68.72 0 894779..896335 - 518 126452927 - BURPS1106A_0910 - putative N-acetylmuramoyl-L-alanine amidase 907 69.01 0 896317..896871 - 184 126453763 - BURPS1106A_0911 - hypothetical protein 908 71.06 0 896889..898118 + 409 126455169 - BURPS1106A_0912 - putative iron-sulfur cluster-binding protein 909 66.03 0 898189..898656 + 155 126452266 ogt BURPS1106A_0913 - methylated-DNA-protein-cysteine S-methyltransferase 910 69.26 0 898656..899657 + 333 126455125 xerD BURPS1106A_0914 - site-specific tyrosine recombinase XerD 911 70.75 0 899654..899800 + 48 126451771 - BURPS1106A_0915 - hypothetical protein 912 71.39 0 899942..901507 - 521 126452811 - BURPS1106A_0916 - AMP-binding protein 913 66.46 0 901637..902128 + 163 126453507 - BURPS1106A_0917 - YbaK/prolyl-tRNA synthetase domain-containing protein 914 66.83 0 902237..902848 + 203 126454626 - BURPS1106A_0918 - putative glycerol-3-phosphate acyltransferase PlsY 915 58.64 -1 903078..903563 - 161 126455262 - BURPS1106A_0919 - nucleotide-binding protein 916 71.65 0 903706..904749 + 347 126454230 murB BURPS1106A_0920 - UDP-N-acetylenolpyruvoylglucosamine reductase 917 63.87 0 904935..905864 - 309 126455355 argF BURPS1106A_0921 - ornithine carbamoyltransferase 918 59.88 -1 906290..906613 + 107 126452039 - BURPS1106A_0922 - hypothetical protein 919 63.80 0 906842..907120 - 92 126453217 rpsT BURPS1106A_0923 - 30S ribosomal protein S20 920 66.39 0 907297..909075 + 592 126454372 mviN BURPS1106A_0924 - integral membrane protein MviN 921 68.21 0 909085..909927 + 280 126454496 - BURPS1106A_0925 - hypothetical protein 922 68.54 0 910196..911155 - 319 126451637 - BURPS1106A_0926 - short chain dehydrogenase/reductase family oxidoreductase 923 65.31 0 911152..911814 - 220 126452690 adk BURPS1106A_0927 - adenylate kinase 924 70.45 0 912023..912814 - 263 126453920 kdsB BURPS1106A_0928 - 3-deoxy-manno-octulosonate cytidylyltransferase 925 67.63 0 912988..913194 - 68 126454062 - BURPS1106A_0929 - hypothetical protein 926 73.65 +1 913175..914305 - 376 126453033 lpxK BURPS1106A_0930 - tetraacyldisaccharide 4'-kinase 927 64.07 0 914436..914666 - 76 126451813 - BURPS1106A_0931 - hypothetical protein 928 73.90 +1 914661..916043 + 460 126455268 xseA BURPS1106A_0932 - exodeoxyribonuclease VII large subunit 929 62.18 -1 916240..916818 + 192 126454128 sodB BURPS1106A_0933 - superoxide dismutase (Fe) 930 66.18 0 916983..917189 + 68 126453553 - BURPS1106A_0934 - hypothetical protein 931 66.91 0 917307..918521 + 404 126452364 - BURPS1106A_0935 - hypothetical protein 932 74.03 +1 918620..918877 + 85 126451801 - BURPS1106A_0936 - hypothetical protein 933 74.54 +1 919263..920468 - 401 126454677 - BURPS1106A_0937 - chromate transporter 934 70.24 0 920702..921457 - 251 126453994 - BURPS1106A_0938 - cyclic nucleotide-binding protein 935 70.27 0 921542..922069 + 175 126452824 - BURPS1106A_0939 - hypothetical protein 936 73.80 +1 922085..923107 + 340 126455021 panE BURPS1106A_0940 - 2-dehydropantoate 2-reductase 937 64.39 0 923260..923391 - 43 126452751 - BURPS1106A_0941 - hypothetical protein 938 72.44 0 923647..924252 + 201 126452729 - BURPS1106A_0942 - hypothetical protein 939 69.50 0 924363..925631 - 422 126453626 - BURPS1106A_0943 - cyclic diguanylate phosphodiesterase 940 77.04 +1 925692..925826 + 44 126454561 - BURPS1106A_0944 - hypothetical protein 941 67.15 0 926289..927728 - 479 126452379 - BURPS1106A_0945 - DHA2 family drug:H+ antiporter-1 942 73.51 +1 928025..928360 + 111 126453301 - BURPS1106A_0947 - hypothetical protein 943 75.83 +1 928333..929685 - 450 126452427 - BURPS1106A_0946 - citrate synthase family protein 944 76.39 +1 929826..929969 - 47 126454029 - BURPS1106A_0948 - hypothetical protein 945 72.81 0 929977..930432 + 151 126454629 - BURPS1106A_0950 - hypothetical protein 946 65.46 0 930402..931148 - 248 126451927 - BURPS1106A_0949 - GntR family transcriptional regulator 947 69.03 0 931317..932162 + 281 126452797 - BURPS1106A_0952 - aldo/keto reductase family oxidoreductase 948 71.35 0 932122..932505 - 127 126453897 - BURPS1106A_0951 - hypothetical protein 949 71.19 0 932502..933164 - 220 126452149 - BURPS1106A_0953 - hypothetical protein 950 71.74 0 933122..935347 - 741 126454432 - BURPS1106A_0954 - hypothetical protein 951 76.59 +1 935320..935571 + 83 126453124 - BURPS1106A_0955 - hypothetical protein 952 66.08 0 935691..938096 - 801 126454785 fusA BURPS1106A_0956 - elongation factor G 953 67.06 0 938103..938612 - 169 126453857 - BURPS1106A_0957 - hypothetical protein 954 73.23 +1 939285..939863 - 192 126453501 - BURPS1106A_0958 - RNA pseudouridine synthase family protein 955 62.06 -1 940131..941390 + 419 126453346 icd BURPS1106A_0960 - isocitrate dehydrogenase 956 64.48 0 941363..941545 - 60 126452842 - BURPS1106A_0959 - hypothetical protein 957 70.95 0 941558..943168 + 536 126453660 - BURPS1106A_0961 - multicopper oxidase family protein 958 53.43 -2 943298..943501 - 67 126453970 - BURPS1106A_0962 - cold shock protein 959 56.51 -2 944034..944348 + 104 126455350 clpS BURPS1106A_0963 - ATP-dependent Clp protease adaptor protein ClpS 960 64.93 0 944345..946645 + 766 126452761 clpA BURPS1106A_0964 - ATP-dependent Clp protease ATP-binding subunit ClpA 961 66.74 0 946745..948121 + 458 126453093 - BURPS1106A_0965 - amino acid permease 962 71.77 0 948194..948937 + 247 126453919 - BURPS1106A_0966 - hypothetical protein 963 65.64 0 949102..949884 + 260 126454774 - BURPS1106A_0967 - hypothetical protein 964 68.90 0 949973..950419 - 148 126451592 dut BURPS1106A_0968 - deoxyuridine 5'-triphosphate nucleotidohydrolase 965 69.47 0 950483..951694 - 403 126452551 coaBC BURPS1106A_0969 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 966 66.47 0 951756..952256 - 166 126453443 lspA BURPS1106A_0970 - signal peptidase II 967 66.77 0 952256..955093 - 945 126452873 ileS BURPS1106A_0971 - isoleucyl-tRNA synthetase 968 71.30 0 955205..956197 - 330 126452288 bimA BURPS1106A_0972 - bifunctional riboflavin kinase/FMN adenylyltransferase 969 69.53 0 956322..956984 + 220 126454710 purN BURPS1106A_0973 - phosphoribosylglycinamide formyltransferase 970 70.70 0 956981..958243 + 420 126454034 sun BURPS1106A_0974 - rRNA small subunit methyltransferase B 971 70.66 0 958255..959607 + 450 126452978 - BURPS1106A_0975 - small conductance mechanosensitive ion channel (MscS) family protein 972 63.83 0 959804..961000 + 398 126452903 - BURPS1106A_0976 - fatty acid desaturase family protein 973 63.77 0 961037..961174 - 45 126451803 - BURPS1106A_0977 - hypothetical protein 974 67.55 0 961169..962305 + 378 126451762 nadA BURPS1106A_0978 - quinolinate synthetase 975 70.06 0 962302..963186 + 294 126454043 nadC BURPS1106A_0979 - nicotinate-nucleotide pyrophosphorylase 976 75.80 +1 963188..963406 + 72 126454503 - BURPS1106A_0981 - hypothetical protein 977 67.54 0 963378..965090 - 570 126454473 nadB BURPS1106A_0980 - L-aspartate oxidase 978 53.57 -2 965147..965314 - 55 126453616 rpmG BURPS1106A_0982 - 50S ribosomal protein L33 979 60.68 -1 965332..965565 - 77 126452424 rpmB BURPS1106A_0983 - 50S ribosomal protein L28 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0