version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 16 71.46 0 16211..17461 + 416 126452956 gspK BURPS1106A_0016 - general secretion pathway protein K 17 73.69 +1 17507..18916 + 469 126454319 gspL BURPS1106A_0017 - general secretion pathway protein L 18 70.08 0 18892..19419 + 175 126454827 gspM BURPS1106A_0018 - general secretory pathway protein M 19 70.58 0 19458..20249 + 263 126452123 gspN BURPS1106A_0019 - general secretory pathway protein N 20 73.90 +1 20494..22110 - 538 126452553 - BURPS1106A_0020 - NodT family efflux transporter outer membrane lipoprotein 21 73.99 +1 22332..22604 - 90 126452562 - BURPS1106A_0021 - hypothetical protein 22 69.68 0 22797..23294 + 165 126454172 - BURPS1106A_0022 - MarR family transcriptional regulator 23 66.79 0 23442..25004 + 520 126455044 - BURPS1106A_0023 - EmrB/QacA family drug resistance transporter 24 70.67 0 25064..25987 - 307 126452277 - BURPS1106A_0024 - LysR family transcriptional regulator 25 75.80 +1 26127..26597 + 156 126452971 - BURPS1106A_0025 - LrgA family protein 26 68.88 0 26666..27388 + 240 126454133 - BURPS1106A_0026 - LrgB-like family protein 27 80.83 +2 27877..28116 - 79 126451729 - BURPS1106A_0027 - hypothetical protein 28 66.67 0 28217..28714 + 165 126452861 fliL BURPS1106A_0028 - flagellar basal body-associated protein FliL 29 63.26 0 28737..29735 + 332 126453439 fliM BURPS1106A_0029 - flagellar motor switch protein FliM 30 68.07 0 29728..30225 + 165 126454703 fliN BURPS1106A_0030 - flagellar motor switch protein FliN 31 76.88 +1 30222..30887 + 221 126452949 - BURPS1106A_0031 - flagellar biosynthesis protein FliO 32 66.79 0 30889..31719 + 276 126453057 fliP BURPS1106A_0032 - flagellar biosynthesis protein FliP 33 67.77 0 31745..32017 + 90 126454577 fliQ BURPS1106A_0033 - flagellar biosynthesis protein FliQ 34 67.94 0 32136..32918 + 260 126455304 fliR BURPS1106A_0034 - flagellar biosynthetic protein FliR 35 72.73 0 33238..33666 - 142 126452153 - BURPS1106A_0035 - MerR family transcriptional regulator 36 72.26 0 33748..34623 + 291 126453010 - BURPS1106A_0036 - putative methyltransferase 37 76.63 +1 34616..35137 + 173 126454837 - BURPS1106A_0037 - hypothetical protein 38 66.67 0 35295..36308 + 337 126455050 - BURPS1106A_0038 - hypothetical protein 39 66.04 0 36392..37189 + 265 126452146 - BURPS1106A_0039 - ABC transporter, ATP-binding protein 40 67.84 0 37217..38065 + 282 126453348 - BURPS1106A_0040 - ABC transporter, permease protein 41 71.38 0 38143..39522 + 459 126454126 - BURPS1106A_0041 - sensor histidine kinase 42 67.40 0 39533..40210 + 225 126451555 - BURPS1106A_0042 - DNA-binding response regulator 43 61.90 -1 40377..40544 - 55 126452167 - BURPS1106A_0043 - hypothetical protein 44 65.20 0 40500..41660 + 386 126454428 - BURPS1106A_0044 - putative porin 45 73.22 +1 41696..41878 + 60 126453561 - BURPS1106A_0045 - hypothetical protein 46 68.29 0 42115..44148 + 677 126452068 - BURPS1106A_0046 - type III DNA modification methyltransferase 47 68.18 0 44189..47218 + 1009 126453237 - BURPS1106A_0047 - Type III restriction enzyme, res subunit 48 69.28 0 47459..47611 + 50 126451908 - BURPS1106A_0048 - hypothetical protein 49 66.21 0 47756..48856 + 366 126454786 - BURPS1106A_0049 - putative porin 50 66.56 0 49256..50215 + 319 126454299 - BURPS1106A_0050 - putative transcriptional regulator 51 71.04 0 50338..51069 - 243 126454494 - BURPS1106A_0051 - ABC transporter, ATP-binding protein 52 77.19 +1 51054..51452 - 132 126452361 - BURPS1106A_0052 - hypothetical protein 53 70.68 0 51442..52164 - 240 126454078 - BURPS1106A_0053 - ABC transporter, ATP-binding protein 54 73.43 +1 52161..53210 - 349 126455437 - BURPS1106A_0054 - ABC transporter, permease protein 55 72.92 0 53207..54085 - 292 126452864 - BURPS1106A_0055 - ABC transporter, permease protein 56 67.70 0 54090..55349 - 419 126452961 - BURPS1106A_0056 - putative ABC transporter, substrate-binding protein 57 70.52 0 55566..57071 - 501 126453750 - BURPS1106A_0057 - putative phenylacetaldehyde dehydrogenase 58 67.43 0 57126..57518 - 130 126454852 - BURPS1106A_0058 - hypothetical protein 59 67.65 0 57529..58338 - 269 126451520 - BURPS1106A_0059 - hypothetical protein 60 73.31 +1 58384..59181 - 265 126452583 - BURPS1106A_0060 - short chain dehydrogenase/reductase family oxidoreductase 61 69.96 0 59266..60936 - 556 126453283 - BURPS1106A_0061 - GMC oxidoreductase 62 64.62 0 61663..62004 + 113 126452383 - BURPS1106A_0062 - PadR family transcriptional regulator 63 69.95 0 62001..63188 + 395 126451988 - BURPS1106A_0063 - hypothetical protein 64 59.17 -1 63268..63387 + 39 126455307 - BURPS1106A_0064 - hypothetical protein 65 60.13 -1 63532..63837 - 101 126453760 - BURPS1106A_0065 - hypothetical protein 66 70.11 0 63861..64847 - 328 126452876 - BURPS1106A_0066 - fatty acid desaturase family protein 67 72.28 0 64877..65713 - 278 126452984 - BURPS1106A_0067 - hypothetical protein 68 72.11 0 66153..67382 - 409 126453968 - BURPS1106A_0068 - AraC family transcriptional regulator 69 66.93 0 67381..68517 + 378 126455128 - BURPS1106A_0069 - acyl-CoA dehydrogenase 70 78.22 +1 68565..68789 - 74 126452204 - BURPS1106A_0070 - hypothetical protein 71 74.83 +1 68772..68918 + 48 126453086 - BURPS1106A_0071 - hypothetical protein 72 70.98 0 69172..70377 + 401 126454300 - BURPS1106A_0072 - acetyl-CoA acetyltransferase 73 70.86 0 70390..72513 + 707 126454240 - BURPS1106A_0073 - putative 3-hydroxyacyl-CoA dehydrogenase 74 72.22 0 72510..72653 + 47 126455425 - BURPS1106A_0074 - hypothetical protein 75 71.96 0 72919..74052 + 377 126451519 - BURPS1106A_0075 - CAIB/BAIF family protein 76 67.90 0 74129..74695 - 188 126452654 - BURPS1106A_0076 - putative lipoprotein 77 64.74 0 74801..74956 - 51 126452680 - BURPS1106A_0077 - hypothetical protein 78 68.11 0 75043..75528 - 161 126453765 - BURPS1106A_0078 - hypothetical protein 79 67.49 0 75535..76503 + 322 126452333 - BURPS1106A_0079 - hypothetical protein 80 68.83 0 76490..76858 + 122 126453223 - BURPS1106A_0080 - putative lipoprotein 81 58.64 -1 77081..77242 + 53 126451666 - BURPS1106A_0082 - hypothetical protein 82 74.19 +1 77239..77517 - 92 126455423 - BURPS1106A_0081 - hypothetical protein 83 74.70 +1 77544..78302 - 252 126451600 prtR BURPS1106A_0083 - transmembrane regulator PrtR 84 68.41 0 78299..78814 - 171 126452547 - BURPS1106A_0084 - sigma-70 family RNA polymerase sigma factor 85 70.63 0 78975..80060 + 361 126453938 - BURPS1106A_0085 - putative catalase 86 64.77 0 80057..80584 + 175 126454920 - BURPS1106A_0086 - putative [Ni] hydrogenase, b-type cytochrome subunit 87 51.22 -2 81137..82036 + 299 126454298 - BURPS1106A_0087 - methionine sulfoxide reductase A 88 55.56 -2 82233..82385 + 50 126455421 - BURPS1106A_0088 - hypothetical protein 89 56.44 -2 82644..82907 + 87 126451486 - BURPS1106A_0089 - transposase subfamily protein 90 61.11 -1 82931..83092 + 53 126452608 - BURPS1106A_0090 - A, transposase OrfB 91 56.70 -2 83097..83387 + 96 126452362 - BURPS1106A_0091 - transposase A 92 62.46 0 83381..84235 + 284 126451517 - BURPS1106A_0092 - transposase B 93 55.08 -2 84389..85225 - 278 126453892 - BURPS1106A_0093 - hypothetical protein 94 60.66 -1 85693..86940 - 415 126452777 - BURPS1106A_0094 - hypothetical protein 95 59.26 -1 87362..87685 + 107 126452186 - BURPS1106A_0095 - XRE family transcriptional regulator 96 58.62 -1 87678..88547 + 289 126455121 - BURPS1106A_0096 - hypothetical protein 97 58.36 -1 88777..91245 + 822 126453526 - BURPS1106A_0097 - type I restriction-modification system M subunit 98 52.85 -2 91595..92542 + 315 126452645 - BURPS1106A_0098 - restriction endonuclease S subunits 99 59.66 -1 92566..95835 + 1089 126453319 - BURPS1106A_0099 - type I site-specific deoxyribonuclease HsdR 100 59.78 -1 95976..96527 + 183 126452415 - BURPS1106A_0100 - hypothetical protein 101 64.16 0 97271..99739 - 822 126452573 gyrB BURPS1106A_0101 - DNA gyrase subunit B 102 63.59 0 99928..101031 - 367 126451494 dnaN BURPS1106A_0102 - DNA polymerase III subunit beta 103 65.73 0 101194..102795 - 533 126451895 dnaA BURPS1106A_0103 - chromosomal replication initiation protein 104 65.93 0 103241..103375 + 44 126454640 rpmH BURPS1106A_0104 - 50S ribosomal protein L34 105 68.37 0 103449..103859 + 136 126452960 rnpA BURPS1106A_0105 - ribonuclease P protein component 106 64.07 0 103939..104208 + 89 126452931 - BURPS1106A_0106 - hypothetical protein 107 64.16 0 104217..105893 + 558 126453447 oxaA BURPS1106A_0107 - putative inner membrane protein translocase component YidC 108 61.19 -1 106050..106469 - 139 126452589 - BURPS1106A_0108 - hypothetical protein 109 53.23 -2 106341..106526 + 61 126452170 - BURPS1106A_0109 - hypothetical protein 110 45.19 -2 106648..106782 - 44 126455321 - BURPS1106A_0110 - hypothetical protein 111 69.02 0 106807..108210 + 467 126454342 trmE BURPS1106A_0111 - tRNA modification GTPase TrmE 112 59.76 -1 108379..109608 + 409 126455326 - BURPS1106A_0112 - phage integrase family site specific recombinase 113 66.88 0 110256..113108 - 950 126452256 - BURPS1106A_0113 - hypothetical protein 114 63.74 0 113248..113589 - 113 126453425 - BURPS1106A_0114 - hypothetical protein 115 61.63 -1 113586..113843 - 85 126452503 - BURPS1106A_0115 - hypothetical protein 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.