version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3723 62.68 0 3691519..3692496 - 325 126453965 rpoA BURPS1106A_3778 - DNA-directed RNA polymerase subunit alpha 3724 63.14 0 3692624..3693247 - 207 126454036 rpsD BURPS1106A_3779 - 30S ribosomal protein S4 3725 65.17 0 3693398..3693799 - 133 126455195 rpsK BURPS1106A_3780 - 30S ribosomal protein S11 3726 61.75 -1 3693823..3694188 - 121 126452378 rpsM BURPS1106A_3781 - 30S ribosomal protein S13 3727 54.70 -2 3694227..3694343 - 38 126453272 rpmJ BURPS1106A_3782 - 50S ribosomal protein L36 3728 53.42 -2 3694364..3694582 - 72 126454890 infA BURPS1106A_3783 - translation initiation factor IF-1 3729 61.02 -1 3694592..3695938 - 448 126451654 secY BURPS1106A_3784 - preprotein translocase subunit SecY 3730 64.37 0 3695983..3696417 - 144 126453326 rplO BURPS1106A_3785 - 50S ribosomal protein L15 3731 60.11 -1 3696446..3696628 - 60 126452002 rpmD BURPS1106A_3786 - 50S ribosomal protein L30 3732 64.55 0 3696644..3697162 - 172 126455142 rpsE BURPS1106A_3787 - 30S ribosomal protein S5 3733 65.57 0 3697176..3697541 - 121 126453933 rplR BURPS1106A_3788 - 50S ribosomal protein L18 3734 62.34 0 3697554..3698084 - 176 126451901 rplF BURPS1106A_3789 - 50S ribosomal protein L6 3735 62.37 0 3698105..3698500 - 131 126454490 rpsH BURPS1106A_3790 - 30S ribosomal protein S8 3736 61.44 -1 3698515..3698820 - 101 126453604 rpsN BURPS1106A_3791 - 30S ribosomal protein S14 3737 58.70 -1 3698828..3699367 - 179 126454010 rplE BURPS1106A_3792 - 50S ribosomal protein L5 3738 59.87 -1 3699385..3699693 - 102 126452216 rplX BURPS1106A_3793 - 50S ribosomal protein L24 3739 59.35 -1 3699703..3700071 - 122 126453506 rplN BURPS1106A_3794 - 50S ribosomal protein L14 3740 57.88 -1 3700381..3700653 - 90 126453739 rpsQ BURPS1106A_3795 - 30S ribosomal protein S17 3741 57.95 -1 3700650..3700844 - 64 126453153 rpmC BURPS1106A_3796 - 50S ribosomal protein L29 3742 61.15 -1 3700854..3701270 - 138 126451996 rplP BURPS1106A_3797 - 50S ribosomal protein L16 3743 63.05 0 3701273..3702073 - 266 126452567 rpsC BURPS1106A_3798 - 30S ribosomal protein S3 3744 59.39 -1 3702085..3702414 - 109 126453662 rplV BURPS1106A_3799 - 50S ribosomal protein L22 3745 56.52 -2 3702427..3702702 - 91 126452243 rpsS BURPS1106A_3800 - 30S ribosomal protein S19 3746 66.43 0 3702713..3703540 - 275 126453402 rplB BURPS1106A_3801 - 50S ribosomal protein L2 3747 56.19 -2 3703543..3703857 - 104 126451802 rplW BURPS1106A_3802 - 50S ribosomal protein L23 3748 61.03 -1 3703854..3704474 - 206 126454667 rplD BURPS1106A_3803 - 50S ribosomal protein L4 3749 62.65 0 3704474..3705145 - 223 126453776 rplC BURPS1106A_3804 - 50S ribosomal protein L3 3750 62.18 -1 3705321..3705632 - 103 126455037 rpsJ BURPS1106A_3805 - 30S ribosomal protein S10 3751 63.06 0 3705785..3706975 - 396 126455227 tuf BURPS1106A_3806 - elongation factor Tu 3752 62.10 -1 3707017..3709119 - 700 126454030 fusA BURPS1106A_3807 - elongation factor G 3753 60.08 -1 3709241..3709711 - 156 126451450 rpsG BURPS1106A_3808 - 30S ribosomal protein S7 3754 61.68 -1 3709882..3710262 - 126 126454808 rpsL BURPS1106A_3809 - 30S ribosomal protein S12 3755 67.91 0 3710478..3712325 - 615 126454768 recQ BURPS1106A_3810 - ATP-dependent DNA helicase RecQ 3756 63.04 0 3712365..3712502 + 45 126452966 - BURPS1106A_3812 - hypothetical protein 3757 57.42 -1 3712465..3712821 - 118 126453895 - BURPS1106A_3811 - ISBma1, transposase 3758 56.70 -2 3712705..3712995 + 96 126452117 - BURPS1106A_3813 - transposase A 3759 62.46 0 3712989..3713843 + 284 126454596 - BURPS1106A_3814 - transposase B 3760 64.14 0 3715051..3719289 - 1412 126453433 rpoC BURPS1106A_3815 - DNA-directed RNA polymerase subunit beta' 3761 63.01 0 3719311..3723417 - 1368 126454290 rpoB BURPS1106A_3816 - DNA-directed RNA polymerase subunit beta 3762 60.53 -1 3723781..3724155 - 124 126455177 rplL BURPS1106A_3817 - 50S ribosomal protein L7/L12 3763 60.54 -1 3724219..3724773 - 184 126451769 rplJ BURPS1106A_3818 - 50S ribosomal protein L10 3764 65.24 0 3725014..3725712 - 232 126452892 rplA BURPS1106A_3819 - 50S ribosomal protein L1 3765 61.81 -1 3725713..3726144 - 143 126453465 rplK BURPS1106A_3820 - 50S ribosomal protein L11 3766 60.22 -1 3726290..3726847 - 185 126454654 nusG BURPS1106A_3821 - transcription antitermination protein NusG 3767 55.91 -2 3726849..3727229 - 126 126455126 secE BURPS1106A_3822 - preprotein translocase subunit SecE 3768 63.22 0 3727407..3728597 - 396 126453973 tuf BURPS1106A_3824 - elongation factor Tu 3769 57.02 -1 3729120..3729233 - 37 126453522 - BURPS1106A_3828 - hypothetical protein 3770 45.30 -2 3735113..3735229 - 38 126451785 - BURPS1106A_3834 - hypothetical protein 3771 70.42 0 3735596..3736873 - 425 126454674 - BURPS1106A_3835 - GDSL-like lipase/acylhydrolase domain-containing protein 3772 65.77 0 3737470..3738468 + 332 126453514 paaG BURPS1106A_3836 - phenylacetate-CoA oxygenase subunit PaaA 3773 62.87 0 3738474..3738815 + 113 126454357 paaH BURPS1106A_3837 - phenylacetate-CoA oxygenase subunit PaaB 3774 68.03 0 3738826..3739629 + 267 126453197 paaI BURPS1106A_3838 - phenylacetate-CoA oxygenase, PaaI subunit 3775 74.07 +1 3739665..3740285 + 206 126452809 paaJ BURPS1106A_3839 - phenylacetate-CoA oxygenase, PaaJ subunit 3776 67.86 0 3740287..3741375 + 362 126453980 paaK BURPS1106A_3840 - phenylacetate-CoA oxygenase/reductase, PaaK subunit 3777 70.76 0 3741497..3742327 + 276 126455139 - BURPS1106A_3841 - hypothetical protein 3778 65.33 0 3742354..3742953 + 199 126452603 - BURPS1106A_3842 - TetR family transcriptional regulator 3779 65.74 0 3743195..3743842 + 215 126453419 - BURPS1106A_3843 - acetyltransferase 3780 65.31 0 3743960..3744475 - 171 126452877 - BURPS1106A_3844 - putative leucine-responsive regulatory protein 3781 63.21 0 3744627..3745724 + 365 126455066 hppD BURPS1106A_3845 - 4-hydroxyphenylpyruvate dioxygenase 3782 67.18 0 3745960..3746154 - 64 126452222 - BURPS1106A_3846 - hypothetical protein 3783 68.17 0 3746474..3750055 + 1193 126453324 - BURPS1106A_3847 - indolepyruvate ferredoxin oxidoreductase 3784 68.29 0 3750075..3750197 + 40 126454259 - BURPS1106A_3848 - AraC family transcriptional regulator 3785 67.06 0 3750582..3752852 - 756 126455382 - BURPS1106A_3849 - malic enzyme 3786 71.54 0 3753037..3753282 - 81 126452171 - BURPS1106A_3850 - hypothetical protein 3787 64.19 0 3753382..3754068 + 228 126453832 pyrE BURPS1106A_3851 - orotate phosphoribosyltransferase 3788 71.88 0 3754391..3754966 + 191 126454897 - BURPS1106A_3852 - putative phosphatidylethanolamine-binding protein 3789 63.78 0 3755067..3755378 - 103 126451528 - BURPS1106A_3853 - hypothetical protein 3790 68.58 0 3755352..3755927 + 191 126451885 - BURPS1106A_3854 - tryptophan repressor binding protein 3791 68.15 0 3756080..3757024 + 314 126452121 argC BURPS1106A_3855 - N-acetyl-gamma-glutamyl-phosphate reductase 3792 69.36 0 3757499..3758872 + 457 126453585 - BURPS1106A_3856 - hypothetical protein 3793 67.31 0 3758998..3760248 + 416 126454448 - BURPS1106A_3857 - putative lipoprotein 3794 65.94 0 3760268..3761098 + 276 126452380 - BURPS1106A_3858 - ompW family protein 3795 72.10 0 3761285..3762223 - 312 126453308 - BURPS1106A_3859 - LysR family transcriptional regulator 3796 74.94 +1 3762259..3763587 + 442 126454719 - BURPS1106A_3860 - major facilitator transporter 3797 68.61 0 3763678..3764346 - 222 126455096 - BURPS1106A_3861 - LysE family translocator protein 3798 70.92 0 3764445..3765314 - 289 126452510 - BURPS1106A_3862 - dehydrogenase 3799 68.78 0 3765441..3766196 + 251 126453915 - BURPS1106A_3863 - hypothetical protein 3800 64.07 0 3766361..3766591 - 76 126451865 - BURPS1106A_3864 - hypothetical protein 3801 59.67 -1 3766812..3767426 - 204 126452624 - BURPS1106A_3865 - hypothetical protein 3802 58.33 -1 3767419..3767538 - 39 126454098 - BURPS1106A_3866 - hypothetical protein 3803 58.91 -1 3767555..3767683 + 42 126454763 - BURPS1106A_3867 - hypothetical protein 3804 69.36 0 3767644..3768051 + 135 126452472 - BURPS1106A_3868 - putative lipoprotein 3805 56.14 -2 3768841..3768954 - 37 126451608 - BURPS1106A_3869 - hypothetical protein 3806 60.98 -1 3769106..3769228 - 40 126454773 - BURPS1106A_3870 - hypothetical protein 3807 65.41 0 3769260..3769577 - 105 126453779 - BURPS1106A_3871 - hypothetical protein 3808 57.89 -1 3769546..3769659 + 37 126453152 - BURPS1106A_3872 - hypothetical protein 3809 71.21 0 3769872..3770069 - 65 126454739 - BURPS1106A_3873 - hypothetical protein 3810 64.39 0 3770092..3771498 + 468 126452964 - BURPS1106A_3874 - amino acid permease 3811 51.28 -2 3771636..3771752 - 38 126453835 - BURPS1106A_3875 - hypothetical protein 3812 56.25 -2 3771946..3772233 + 95 126455054 - BURPS1106A_3876 - hypothetical protein 3813 61.75 -1 3773007..3773840 - 277 126454182 - BURPS1106A_3877 - A, transposase OrfB 3814 57.20 -1 3773864..3774127 - 87 126453330 - BURPS1106A_3878 - transposase subfamily protein 3815 60.56 -1 3774386..3776071 - 561 126454471 - BURPS1106A_3879 - outer membrane hemolysin activator protein 3816 62.20 -1 3776738..3786217 - 3159 126454501 - BURPS1106A_3880 - polymorphic membrane protein, filamentous haemagglutinin/adhesin 3817 49.37 -2 3787047..3787445 + 132 126453615 - BURPS1106A_3881 - hypothetical protein 3818 56.70 -2 3787780..3788070 + 96 126452747 - BURPS1106A_3882 - transposase A 3819 62.46 0 3788064..3788918 + 284 126451829 - BURPS1106A_3883 - transposase B 3820 55.14 -2 3788943..3789419 - 158 126453245 - BURPS1106A_3884 - hypothetical protein 3821 56.70 -2 3790351..3790641 + 96 126452348 - BURPS1106A_3885 - transposase A 3822 62.46 0 3790635..3791489 + 284 126454964 - BURPS1106A_3886 - transposase B 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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