version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3634 60.00 -1 3605210..3605329 - 39 126453821 - BURPS1106A_3688 - hypothetical protein 3635 58.98 -1 3605219..3606025 + 268 126454398 - BURPS1106A_3689 - hypothetical protein 3636 61.67 -1 3606153..3606452 + 99 126451514 - BURPS1106A_3690 - Type I restriction-modification system methyltransferase subunit 3637 61.24 -1 3606462..3606719 - 85 126452095 - BURPS1106A_3691 - XRE family transcriptional regulator 3638 61.69 -1 3607235..3609004 + 589 126455225 - BURPS1106A_3692 - putative lipoprotein 3639 58.90 -1 3609075..3609731 + 218 126453814 - BURPS1106A_3693 - putative lipoprotein 3640 56.82 -2 3610808..3611203 - 131 126454874 - BURPS1106A_3694 - hypothetical protein 3641 57.92 -1 3613308..3614393 - 361 126453747 - BURPS1106A_3695 - hypothetical protein 3642 63.44 0 3614512..3615657 - 381 126453158 - BURPS1106A_3696 - hypothetical protein 3643 61.53 -1 3615733..3617271 - 512 126452029 - BURPS1106A_3697 - TOPRIM 3644 61.50 -1 3617281..3617493 - 70 126455261 - BURPS1106A_3698 - prophage CP4-57 regulatory protein (AlpA) 3645 57.55 -1 3618449..3618799 - 116 126454628 - BURPS1106A_3699 - phage integrase 3646 62.50 0 3618922..3620025 + 367 126453444 - BURPS1106A_3700 - transposase, IS4 3647 60.17 -1 3620175..3621005 - 276 126454671 - BURPS1106A_3701 - phage integrase 3648 64.75 0 3621298..3621819 - 173 126453519 sspB BURPS1106A_3703 - ClpXP protease specificity-enhancing factor 3649 59.31 -1 3621889..3622500 - 203 126452854 sspA BURPS1106A_3704 - stringent starvation protein A 3650 59.95 -1 3622593..3623351 - 252 126452047 petC BURPS1106A_3705 - ubiquinol-cytochrome c reductase, cytochrome c1 3651 62.47 0 3623374..3624756 - 460 126453900 petB BURPS1106A_3706 - ubiquinol-cytochrome c reductase, cytochrome b 3652 65.54 0 3624757..3625377 - 206 126454818 petA BURPS1106A_3707 - ubiquinol-cytochrome c reductase, iron-sulfur subunit 3653 63.59 0 3625598..3626344 - 248 126451667 - BURPS1106A_3708 - NIF3 family protein 3654 66.58 0 3626366..3627574 + 402 126452486 - BURPS1106A_3709 - serine protease 3655 73.50 +1 3627612..3627845 - 77 126454343 - BURPS1106A_3710 - hypothetical protein 3656 63.35 0 3627915..3628697 - 260 126455299 tatC BURPS1106A_3711 - Sec-independent protein translocase TatC 3657 71.40 0 3628736..3629263 - 175 126454320 tatB BURPS1106A_3712 - sec-independent translocase 3658 61.54 -1 3629290..3629523 - 77 126455241 tatA BURPS1106A_3713 - twin argininte translocase protein A 3659 66.94 0 3629612..3629977 - 121 126452087 - BURPS1106A_3714 - HIT family protein 3660 60.26 -1 3630006..3630395 - 129 126452972 - BURPS1106A_3715 - hypothetical protein 3661 67.48 0 3630448..3630816 - 122 126453907 hisE BURPS1106A_3716 - phosphoribosyl-ATP pyrophosphatase 3662 63.29 0 3630813..3631226 - 137 126454802 hisI BURPS1106A_3717 - phosphoribosyl-AMP cyclohydrolase 3663 69.96 0 3631226..3632014 - 262 126451649 hisF BURPS1106A_3718 - imidazole glycerol phosphate synthase subunit HisF 3664 63.89 0 3632082..3632837 - 251 126452514 hisA BURPS1106A_3719 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3665 66.67 0 3633005..3633646 - 213 126454995 hisH BURPS1106A_3720 - imidazole glycerol phosphate synthase subunit HisH 3666 64.09 0 3633643..3634263 - 206 126452261 - BURPS1106A_3721 - MarC membrane protein 3667 65.14 0 3634319..3634906 - 195 126454968 hisB BURPS1106A_3722 - imidazoleglycerol-phosphate dehydratase 3668 69.47 0 3634970..3636040 - 356 126452351 hisC BURPS1106A_3723 - histidinol-phosphate aminotransferase 3669 69.58 0 3636196..3637533 - 445 126453408 hisD BURPS1106A_3724 - histidinol dehydrogenase 3670 68.19 0 3637575..3638231 - 218 126453353 hisG BURPS1106A_3725 - ATP phosphoribosyltransferase catalytic subunit 3671 70.37 0 3638228..3639577 - 449 126454113 murA BURPS1106A_3726 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3672 61.25 -1 3639591..3639830 - 79 126451457 - BURPS1106A_3727 - BolA/YrbA family protein 3673 63.76 0 3639916..3640671 - 251 126452536 - BURPS1106A_3728 - ABC-2 type transporter, permease protein 3674 66.67 0 3640668..3641594 - 308 126452846 - BURPS1106A_3729 - ABC transporter, ATP-binding protein 3675 73.33 +1 3641890..3642159 - 89 126453492 - BURPS1106A_3730 - hypothetical protein 3676 64.30 0 3642156..3642788 - 210 126454990 - BURPS1106A_3731 - toluene tolerance protein 3677 69.73 0 3642903..3643913 - 336 126451844 - BURPS1106A_3732 - VacJ family lipoprotein 3678 65.42 0 3643910..3644470 - 186 126454511 - BURPS1106A_3733 - mce family protein 3679 65.49 0 3644483..3645250 - 255 126451565 - BURPS1106A_3734 - toluene tolerance ABC transporter, permease protein 3680 68.13 0 3645247..3646065 - 272 126451478 - BURPS1106A_3735 - toluene tolerance ABC transporter, ATP-binding protein 3681 74.64 +1 3646165..3647268 - 367 126453292 thiE BURPS1106A_3736 - thiamine-phosphate pyrophosphorylase 3682 69.73 0 3647265..3648080 - 271 126454305 thiG BURPS1106A_3737 - thiazole synthase 3683 72.73 0 3648133..3648330 - 65 126455368 thiS BURPS1106A_3738 - sulfur carrier protein ThiS 3684 73.63 +1 3648379..3649512 - 377 126451980 thiO BURPS1106A_3739 - glycine oxidase ThiO 3685 69.98 0 3649696..3650118 + 140 126453067 - BURPS1106A_3740 - hypothetical protein 3686 66.78 0 3650127..3651881 + 584 126452939 - BURPS1106A_3741 - ABC transporter, permease/ATP-binding protein 3687 74.85 +1 3651871..3652041 + 56 126453549 - BURPS1106A_3742 - hypothetical protein 3688 75.58 +1 3652079..3652639 - 186 126453556 - BURPS1106A_3743 - 2'-5' RNA ligase 3689 68.32 0 3652636..3654147 - 503 126452834 - BURPS1106A_3744 - sodium:alanine symporter family protein 3690 59.75 -1 3654191..3654349 - 52 126453082 - BURPS1106A_3745 - hypothetical protein 3691 67.76 0 3654427..3655893 - 488 126451972 gltD BURPS1106A_3746 - glutamate synthase subunit beta 3692 66.45 0 3655987..3660690 - 1567 126454893 gltB BURPS1106A_3747 - glutamate synthase, large subunit 3693 58.33 -1 3660724..3660855 + 43 126453629 - BURPS1106A_3748 - hypothetical protein 3694 68.07 0 3660982..3661695 - 237 126452625 - BURPS1106A_3749 - hypothetical protein 3695 62.43 0 3661888..3662619 + 243 126453273 - BURPS1106A_3750 - ompW family protein 3696 72.31 0 3662765..3663526 - 253 126452263 ugpQ BURPS1106A_3751 - cytoplasmic glycerophosphodiester phosphodiesterase 3697 70.36 0 3663571..3664653 - 360 126455006 ugpC BURPS1106A_3752 - glycerol-3-phosphate transporter ATP-binding subunit 3698 65.01 0 3664679..3665524 - 281 126452250 ugpE BURPS1106A_3753 - glycerol-3-phosphate transporter membrane protein 3699 65.42 0 3665521..3666405 - 294 126455200 ugpA BURPS1106A_3754 - sn-glycerol-3-phosphate transport system permease protein ugpA 3700 65.84 0 3666536..3667861 - 441 126453942 ugpB BURPS1106A_3755 - glycerol-3-phosphate transporter periplasmic binding protein 3701 67.40 0 3667946..3669178 - 410 126452532 - BURPS1106A_3756 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 3702 68.15 0 3669227..3670306 - 359 126455013 aroB BURPS1106A_3757 - 3-dehydroquinate synthase 3703 65.17 0 3670303..3670836 - 177 126454778 aroK BURPS1106A_3758 - shikimate kinase 3704 70.10 0 3670938..3672335 - 465 126454219 pilQ BURPS1106A_3759 - type IV pilus secretin PilQ 3705 75.06 +1 3672671..3673564 - 297 126453051 - BURPS1106A_3760 - hypothetical protein 3706 74.85 +1 3673627..3674298 - 223 126451484 - BURPS1106A_3761 - putative PilN protein 3707 75.84 +1 3674304..3675251 - 315 126454627 - BURPS1106A_3762 - hypothetical protein 3708 66.58 0 3675493..3677886 + 797 126451466 - BURPS1106A_3763 - 1A family penicillin-binding protein 3709 66.06 0 3678002..3678328 - 108 126455414 cyaY BURPS1106A_3764 - frataxin-like protein 3710 72.98 +1 3678365..3678649 + 94 126453170 - BURPS1106A_3765 - putative lipoprotein 3711 68.71 0 3678660..3679931 + 423 126453755 lysA BURPS1106A_3766 - diaminopimelate decarboxylase 3712 64.00 0 3680008..3680157 - 49 126455360 - BURPS1106A_3767 - hypothetical protein 3713 69.70 0 3680190..3680915 - 241 126452046 - BURPS1106A_3768 - putative sulfite oxidase subunit YedZ 3714 65.56 0 3680925..3681920 - 331 126452306 - BURPS1106A_3769 - putative sulfite oxidase subunit YedY 3715 65.83 0 3682098..3683288 - 396 126453509 - BURPS1106A_3770 - cytochrome C assembly protein 3716 66.39 0 3683293..3685449 - 718 126454376 - BURPS1106A_3771 - putative cytochrome C biogenesis protein 3717 66.83 0 3685601..3686221 - 206 126455317 - BURPS1106A_3772 - cytochrome c family protein 3718 66.06 0 3686465..3687124 + 219 126454410 - BURPS1106A_3773 - GTPase EngB 3719 64.65 0 3687318..3688406 + 362 126455399 hemB BURPS1106A_3774 - delta-aminolevulinic acid dehydratase 3720 68.95 0 3688622..3690505 - 627 126453650 - BURPS1106A_3775 - thiol:disulfide interchange protein, putative 3721 64.96 0 3690498..3690848 - 116 126454798 - BURPS1106A_3776 - divalent cation tolerance family protein 3722 62.63 0 3690983..3691378 - 131 126451867 rplQ BURPS1106A_3777 - 50S ribosomal protein L17 3723 62.68 0 3691519..3692496 - 325 126453965 rpoA BURPS1106A_3778 - DNA-directed RNA polymerase subunit alpha 3724 63.14 0 3692624..3693247 - 207 126454036 rpsD BURPS1106A_3779 - 30S ribosomal protein S4 3725 65.17 0 3693398..3693799 - 133 126455195 rpsK BURPS1106A_3780 - 30S ribosomal protein S11 3726 61.75 -1 3693823..3694188 - 121 126452378 rpsM BURPS1106A_3781 - 30S ribosomal protein S13 3727 54.70 -2 3694227..3694343 - 38 126453272 rpmJ BURPS1106A_3782 - 50S ribosomal protein L36 3728 53.42 -2 3694364..3694582 - 72 126454890 infA BURPS1106A_3783 - translation initiation factor IF-1 3729 61.02 -1 3694592..3695938 - 448 126451654 secY BURPS1106A_3784 - preprotein translocase subunit SecY 3730 64.37 0 3695983..3696417 - 144 126453326 rplO BURPS1106A_3785 - 50S ribosomal protein L15 3731 60.11 -1 3696446..3696628 - 60 126452002 rpmD BURPS1106A_3786 - 50S ribosomal protein L30 3732 64.55 0 3696644..3697162 - 172 126455142 rpsE BURPS1106A_3787 - 30S ribosomal protein S5 3733 65.57 0 3697176..3697541 - 121 126453933 rplR BURPS1106A_3788 - 50S ribosomal protein L18 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0