version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3546 67.29 0 3505874..3507637 - 587 126454606 gabP BURPS1106A_3600 - GABA permease 3547 70.14 0 3507782..3507925 - 47 126452999 - BURPS1106A_3601 - hypothetical protein 3548 73.96 +1 3507943..3508422 - 159 126452806 - BURPS1106A_3602 - hypothetical protein 3549 72.78 0 3508538..3509518 - 326 126455274 - BURPS1106A_3603 - glycerophosphoryl diester phosphodiesterase family protein 3550 76.95 +1 3509697..3509978 + 93 126454820 - BURPS1106A_3604 - hypothetical protein 3551 64.99 0 3510265..3511932 + 555 126454391 - BURPS1106A_3606 - putative ABC transporter ATP-binding protein 3552 78.06 +1 3511911..3512147 - 78 126451495 - BURPS1106A_3605 - hypothetical protein 3553 67.79 0 3512269..3512892 - 207 126452681 - BURPS1106A_3607 - HAD family hydrolase 3554 71.71 0 3512889..3513602 - 237 126451568 - BURPS1106A_3608 - isochorismatase family protein 3555 71.52 0 3513572..3515386 - 604 126454960 - BURPS1106A_3609 - M24 family metallopeptidase 3556 70.20 0 3515405..3515659 - 84 126453867 - BURPS1106A_3610 - hypothetical protein 3557 77.24 +1 3515656..3515967 - 103 126452438 - BURPS1106A_3611 - hypothetical protein 3558 78.21 +1 3516008..3516241 + 77 126453716 - BURPS1106A_3612 - hypothetical protein 3559 68.43 0 3516253..3517557 + 434 126454338 hemA BURPS1106A_3613 - glutamyl-tRNA reductase 3560 67.59 0 3517624..3518706 + 360 126454756 prfA BURPS1106A_3614 - peptide chain release factor 1 3561 73.78 +1 3518750..3519607 + 285 126452796 hemK BURPS1106A_3615 - protein hemK 3562 58.90 -1 3519687..3519995 + 102 126451940 - BURPS1106A_3616 - putative glutaredoxin 3563 69.68 0 3520010..3520606 + 198 126452074 ubiX BURPS1106A_3617 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3564 70.72 0 3520890..3521678 + 262 126455222 - BURPS1106A_3618 - class III extradiol-type catecholic dioxygenase family protein 3565 65.36 0 3522051..3523652 - 533 126455377 - BURPS1106A_3619 - amino acid permease 3566 59.33 -1 3523635..3523784 + 49 126454221 - BURPS1106A_3620 - hypothetical protein 3567 56.86 -2 3524086..3524289 + 67 126452091 - BURPS1106A_3622 - cold-shock domain-contain protein 3568 70.29 0 3524276..3524413 - 45 126453189 - BURPS1106A_3621 - hypothetical protein 3569 69.28 0 3524476..3525738 - 420 126454041 - BURPS1106A_3623 - molecular chaperone, Hsp70 class 3570 77.27 +1 3525862..3526059 + 65 126455179 - BURPS1106A_3624 - hypothetical protein 3571 67.66 0 3526460..3527065 - 201 126452862 - BURPS1106A_3625 - nitroreductase family protein 3572 70.66 0 3527027..3527602 + 191 126454702 - BURPS1106A_3627 - hypothetical protein 3573 70.33 0 3527562..3528845 - 427 126451749 - BURPS1106A_3626 - major facilitator transporter 3574 69.92 0 3529004..3529648 + 214 126453445 - BURPS1106A_3628 - TetR family transcriptional regulator 3575 65.54 0 3530007..3530630 + 207 126453361 - BURPS1106A_3629 - hypothetical protein 3576 66.45 0 3530722..3531624 - 300 126452223 - BURPS1106A_3630 - hypothetical protein 3577 72.30 0 3531752..3532888 - 378 126455020 - BURPS1106A_3631 - putative methyltransferase 3578 71.24 0 3532865..3533170 + 101 126452916 - BURPS1106A_3632 - hypothetical protein 3579 65.24 0 3533245..3534363 - 372 126453052 - BURPS1106A_3633 - putative acyltransferase 3580 74.58 +1 3534362..3534841 + 159 126454866 - BURPS1106A_3635 - hypothetical protein 3581 69.25 0 3534801..3535304 - 167 126453495 - BURPS1106A_3634 - putative lipoprotein 3582 35.09 -2 3535498..3535611 + 37 126452307 - BURPS1106A_3636 - hypothetical protein 3583 64.22 0 3535908..3538073 + 721 126452967 - BURPS1106A_3637 - M1 family peptidase 3584 63.91 0 3538655..3539053 + 132 126453497 - BURPS1106A_3638 - hypothetical protein 3585 64.44 0 3539096..3539365 + 89 126455446 - BURPS1106A_3639 - hypothetical protein 3586 64.07 0 3539468..3539698 + 76 126452670 - BURPS1106A_3640 - hypothetical protein 3587 65.55 0 3539932..3540288 - 118 126451515 - BURPS1106A_3641 - hypothetical protein 3588 67.30 0 3540314..3541582 + 422 126454853 - BURPS1106A_3642 - putative secretion protein 3589 66.62 0 3541597..3543858 + 753 126453800 - BURPS1106A_3643 - putative toxin secretion ABC transporter, ATP-binding protein 3590 68.79 0 3543888..3545303 + 471 126452663 - BURPS1106A_3644 - TolC family type I secretion outer membrane protein 3591 62.67 0 3545288..3545437 + 49 126453820 - BURPS1106A_3645 - hypothetical protein 3592 73.07 +1 3545513..3546481 - 322 126453523 - BURPS1106A_3646 - hypothetical protein 3593 58.49 -1 3546493..3547458 + 321 126452417 - BURPS1106A_3647 - D-alanyl-D-alanine carboxypeptidase family protein 3594 65.94 0 3547487..3547624 + 45 126453276 - BURPS1106A_3648 - hypothetical protein 3595 64.04 0 3547609..3547722 + 37 126454205 - BURPS1106A_3649 - hypothetical protein 3596 67.72 0 3547730..3551623 + 1297 126454823 - BURPS1106A_3650 - hypothetical protein 3597 66.77 0 3551620..3552609 + 329 126453923 - BURPS1106A_3651 - hypothetical protein 3598 70.31 0 3552614..3553546 + 310 126453039 - BURPS1106A_3652 - ompA family protein 3599 69.70 0 3553745..3554866 - 373 126452090 - BURPS1106A_3653 - ImpA-related N-terminal family protein 3600 68.76 0 3554956..3557625 - 889 126451777 - BURPS1106A_3654 - ClpA/B type protease 3601 70.03 0 3557659..3558759 - 366 126454687 - BURPS1106A_3655 - hypothetical protein 3602 66.94 0 3558723..3560561 - 612 126453567 - BURPS1106A_3656 - hypothetical protein 3603 63.77 0 3560641..3561123 - 160 126452668 - BURPS1106A_3657 - hypothetical protein 3604 61.71 -1 3561181..3561684 - 167 126451804 - BURPS1106A_3658 - hypothetical protein 3605 62.98 0 3561757..3563247 - 496 126454940 - BURPS1106A_3659 - hypothetical protein 3606 63.01 0 3563264..3563782 - 172 126455085 - BURPS1106A_3660 - hypothetical protein 3607 72.33 0 3563819..3564454 - 211 126453290 - BURPS1106A_3661 - TPR repeat-containing protein 3608 52.17 -2 3564616..3564753 - 45 126452377 - BURPS1106A_3662 - hypothetical protein 3609 64.84 0 3564876..3565478 + 200 126455022 - BURPS1106A_3663 - putative lipoprotein 3610 66.00 0 3565587..3566933 + 448 126453341 - BURPS1106A_3664 - hypothetical protein 3611 64.12 0 3566930..3567715 + 261 126452435 - BURPS1106A_3665 - hypothetical protein 3612 69.13 0 3567817..3568182 + 121 126453577 - BURPS1106A_3666 - phage tail completion protein 3613 69.30 0 3569271..3569687 - 138 126451812 - BURPS1106A_3667 - DNA methylase 3614 68.18 0 3569772..3569969 - 65 126452919 - BURPS1106A_3668 - bacteriophage tail protein I 3615 69.72 0 3570176..3570502 - 108 126454262 - BURPS1106A_3669 - bacteriophage baseplate assembly protein J 3616 62.36 0 3570789..3571949 - 386 126455202 - BURPS1106A_3670 - ISBma1, transposase 3617 62.71 0 3572859..3573389 + 176 126453279 - BURPS1106A_3671 - hypothetical protein 3618 60.69 -1 3574186..3575289 + 367 126454388 - BURPS1106A_3672 - gp31 3619 55.08 -2 3575381..3577201 - 606 126453477 - BURPS1106A_3673 - hypothetical protein 3620 62.77 0 3577817..3579688 - 623 126453871 - BURPS1106A_3674 - hypothetical protein 3621 63.82 0 3579691..3583689 - 1332 126454020 - BURPS1106A_3675 - helicase, C-terminal 3622 57.44 -1 3583686..3585311 - 541 126455130 - BURPS1106A_3676 - hypothetical protein 3623 59.64 -1 3585308..3588439 - 1043 126453422 - BURPS1106A_3677 - helicase, C-terminal:dead/deah box helicase, n-terminal 3624 63.18 0 3588455..3592840 - 1461 126454012 - BURPS1106A_3678 - hypothetical protein 3625 54.87 -2 3593047..3593241 + 64 126454682 - BURPS1106A_3679 - hypothetical protein 3626 62.87 0 3593469..3596606 - 1045 126452260 - BURPS1106A_3680 - SNF2-related:helicase, C-terminal 3627 57.58 -1 3597115..3598149 - 344 126453573 - BURPS1106A_3681 - modification methylase HgiDII 3628 56.35 -2 3598216..3598467 - 83 126454476 - BURPS1106A_3682 - prophage CP4-57 regulatory protein (AlpA) 3629 61.82 -1 3599423..3600391 + 322 126455082 - BURPS1106A_3683 - hypothetical protein 3630 63.79 0 3600561..3601463 + 300 126454464 - BURPS1106A_3684 - hypothetical protein 3631 62.39 0 3601519..3601752 + 77 126451910 - BURPS1106A_3685 - hypothetical protein 3632 62.70 0 3601781..3602713 + 310 126452753 - BURPS1106A_3686 - hypothetical protein 3633 62.50 0 3603971..3605074 - 367 126454214 - BURPS1106A_3687 - transposase, IS4 3634 60.00 -1 3605210..3605329 - 39 126453821 - BURPS1106A_3688 - hypothetical protein 3635 58.98 -1 3605219..3606025 + 268 126454398 - BURPS1106A_3689 - hypothetical protein 3636 61.67 -1 3606153..3606452 + 99 126451514 - BURPS1106A_3690 - Type I restriction-modification system methyltransferase subunit 3637 61.24 -1 3606462..3606719 - 85 126452095 - BURPS1106A_3691 - XRE family transcriptional regulator 3638 61.69 -1 3607235..3609004 + 589 126455225 - BURPS1106A_3692 - putative lipoprotein 3639 58.90 -1 3609075..3609731 + 218 126453814 - BURPS1106A_3693 - putative lipoprotein 3640 56.82 -2 3610808..3611203 - 131 126454874 - BURPS1106A_3694 - hypothetical protein 3641 57.92 -1 3613308..3614393 - 361 126453747 - BURPS1106A_3695 - hypothetical protein 3642 63.44 0 3614512..3615657 - 381 126453158 - BURPS1106A_3696 - hypothetical protein 3643 61.53 -1 3615733..3617271 - 512 126452029 - BURPS1106A_3697 - TOPRIM 3644 61.50 -1 3617281..3617493 - 70 126455261 - BURPS1106A_3698 - prophage CP4-57 regulatory protein (AlpA) 3645 57.55 -1 3618449..3618799 - 116 126454628 - BURPS1106A_3699 - phage integrase 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0