version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3462 65.29 0 3413566..3414147 - 193 126454952 - BURPS1106A_3510 - hypothetical protein 3463 62.13 -1 3414582..3415793 - 403 126453692 nrdB BURPS1106A_3511 - ribonucleotide-diphosphate reductase subunit beta 3464 66.67 0 3416161..3419148 - 995 126454560 nrdA BURPS1106A_3512 - ribonucleotide-diphosphate reductase subunit alpha 3465 65.96 0 3419173..3419454 + 93 126451831 - BURPS1106A_3513 - hypothetical protein 3466 68.36 0 3419619..3420209 - 196 126452698 ampD BURPS1106A_3514 - N-acetyl-anhydromuranmyl-L-alanine amidase 3467 72.59 0 3420206..3420526 - 106 126454725 - BURPS1106A_3515 - hypothetical protein 3468 70.56 0 3420540..3421439 - 299 126455100 - BURPS1106A_3516 - cytochrome C assembly family protein 3469 66.74 0 3421527..3422894 + 455 126451954 ffh BURPS1106A_3517 - signal recognition particle protein 3470 63.95 0 3422992..3423543 + 183 126453542 - BURPS1106A_3518 - hypoxanthine-guanine phosphoribosyltransferase 3471 66.17 0 3423734..3424336 - 200 126453993 - BURPS1106A_3519 - MarC membrane protein 3472 66.49 0 3424368..3426104 - 578 126455301 proS BURPS1106A_3520 - prolyl-tRNA synthetase 3473 63.90 0 3426322..3426972 + 216 126452879 - BURPS1106A_3521 - dinucleoside polyphosphate hydrolase 3474 62.19 -1 3427058..3427615 + 185 126454047 - BURPS1106A_3522 - putative lipoprotein 3475 68.36 0 3427825..3428943 - 372 161986641 proB BURPS1106A_3523 - gamma-glutamyl kinase 3476 66.40 0 3429028..3430146 - 372 126451715 obgE BURPS1106A_3524 - GTPase ObgE 3477 65.53 0 3430331..3430594 - 87 126453547 rpmA BURPS1106A_3525 - 50S ribosomal protein L27 3478 56.09 -2 3430623..3430934 - 103 126454153 rplU BURPS1106A_3526 - 50S ribosomal protein L21 3479 63.36 0 3431150..3432148 + 332 126451455 ispB BURPS1106A_3527 - octaprenyl-diphosphate synthase 3480 63.19 0 3432429..3433724 + 431 126453893 - BURPS1106A_3530 - putative transporter 3481 75.82 +1 3433681..3433833 - 50 126451864 - BURPS1106A_3529 - hypothetical protein 3482 72.14 0 3433860..3435083 + 407 126452463 pilB BURPS1106A_3531 - type IV pilus biogenesis protein PilB 3483 72.50 0 3435080..3436297 + 405 126451673 pilC BURPS1106A_3532 - type IV pilus biogenesis protein PilC 3484 70.27 0 3436342..3437256 + 304 126455285 pilD BURPS1106A_3533 - type IV prepilin leader peptidase 3485 67.16 0 3437260..3437871 + 203 126453294 coaE BURPS1106A_3534 - dephospho-CoA kinase 3486 62.83 0 3438020..3438775 + 251 126452426 - BURPS1106A_3535 - hypothetical protein 3487 65.69 0 3438811..3439014 + 67 126451790 - BURPS1106A_3536 - hypothetical protein 3488 68.22 0 3439150..3439599 - 149 126454135 - BURPS1106A_3537 - mutator mutT protein 3489 65.06 0 3439596..3440465 - 289 126452940 - BURPS1106A_3538 - hypothetical protein 3490 67.68 0 3440486..3441772 - 428 126455430 argJ BURPS1106A_3539 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 3491 65.56 0 3441882..3444677 - 931 126452459 secA BURPS1106A_3540 - preprotein translocase subunit SecA 3492 69.34 0 3444863..3445423 + 186 126452626 - BURPS1106A_3541 - hypothetical protein 3493 72.71 0 3445389..3445868 + 159 126454688 - BURPS1106A_3542 - hypothetical protein 3494 63.73 0 3446259..3447176 - 305 126453520 lpxC BURPS1106A_3543 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 3495 67.65 0 3447418..3447924 - 168 126454386 - BURPS1106A_3544 - anti-oxidant AhpCTSA family protein 3496 67.84 0 3448110..3449306 - 398 126453087 ftsZ BURPS1106A_3545 - cell division protein FtsZ 3497 65.45 0 3449415..3450647 - 410 126453508 ftsA BURPS1106A_3546 - cell division protein FtsA 3498 67.73 0 3450674..3451426 - 250 126452609 ftsQ BURPS1106A_3547 - cell division protein FtsQ 3499 66.99 0 3451447..3452385 - 312 126453261 ddlB BURPS1106A_3548 - D-alanine--D-alanine ligase B 3500 70.39 0 3452387..3453784 - 465 126454974 murC BURPS1106A_3549 - UDP-N-acetylmuramate--L-alanine ligase 3501 70.83 0 3453781..3454884 - 367 126451935 murG BURPS1106A_3550 - N-acetylglucosaminyl transferase 3502 66.82 0 3455006..3456298 - 430 126452793 ftsW BURPS1106A_3551 - cell division protein FtsW 3503 72.61 0 3456295..3457809 - 504 126453698 murD BURPS1106A_3552 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 3504 63.59 0 3457835..3459004 - 389 126454548 mraY BURPS1106A_3553 - phospho-N-acetylmuramoyl-pentapeptide-transferase 3505 72.57 0 3459019..3460425 - 468 126451793 murF BURPS1106A_3554 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 3506 71.20 0 3460422..3461966 - 514 126452893 murE BURPS1106A_3555 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 3507 65.64 0 3461963..3463807 - 614 126453513 - BURPS1106A_3556 - penicillin-binding protein 3508 63.94 0 3463804..3464133 - 109 126454651 ftsL BURPS1106A_3557 - cell division protein FtsL 3509 65.71 0 3464130..3465071 - 313 126454576 mraW BURPS1106A_3558 - S-adenosyl-methyltransferase MraW 3510 62.94 0 3465095..3465523 - 142 126455248 mraZ BURPS1106A_3559 - cell division protein MraZ 3511 66.83 0 3465911..3466537 - 208 126453836 - BURPS1106A_3560 - ubiquinone biosynthesis protein 3512 64.51 0 3466818..3467978 + 386 126452945 - BURPS1106A_3561 - outer membrane porin 3513 63.56 0 3468083..3469564 - 493 126451695 - BURPS1106A_3562 - transposase 3514 64.46 0 3469807..3471480 - 557 126454261 - BURPS1106A_3563 - acyl-CoA synthetase 3515 62.72 0 3471620..3473695 - 691 126453610 - BURPS1106A_3564 - molybdopterin oxidoreductase 3516 45.30 -2 3479506..3479622 - 38 126452500 - BURPS1106A_3570 - hypothetical protein 3517 50.00 -2 3479919..3480032 + 37 126452513 - BURPS1106A_3572 - hypothetical protein 3518 62.64 0 3480019..3480813 - 264 126453436 - BURPS1106A_3571 - enoyl-CoA hydratase 3519 66.43 0 3480926..3482632 + 568 126455462 paaN BURPS1106A_3573 - phenylacetic acid degradation protein paaN 3520 72.33 0 3482706..3483923 + 405 126453966 pcaF BURPS1106A_3574 - beta-ketoadipyl CoA thiolase 3521 66.04 0 3484019..3484810 + 263 126455171 paaB BURPS1106A_3575 - enoyl-CoA hydratase 3522 65.20 0 3484812..3485288 + 158 126452791 paaD BURPS1106A_3576 - phenylacetic acid degradation protein PaaD 3523 65.82 0 3485326..3486624 + 432 126453651 paaF BURPS1106A_3577 - phenylacetate-CoA ligase 3524 68.70 0 3486952..3488229 - 425 126454532 mltA BURPS1106A_3578 - membrane-bound lytic murein transglycosylase A 3525 64.53 0 3488287..3488661 - 124 126451550 apaG BURPS1106A_3579 - ApaG 3526 70.95 0 3488587..3488796 + 69 126452695 - BURPS1106A_3580 - hypothetical protein 3527 66.81 0 3488843..3489529 + 228 126453569 rpe BURPS1106A_3581 - ribulose-phosphate 3-epimerase 3528 67.07 0 3489526..3490263 + 245 126454711 gph BURPS1106A_3582 - phosphoglycolate phosphatase 3529 66.09 0 3490551..3492119 + 522 126452015 pabB BURPS1106A_3583 - anthranilate synthase component I 3530 64.64 0 3492133..3492723 + 196 126452687 pabA BURPS1106A_3584 - anthranilate synthase component II 3531 68.12 0 3492741..3493772 + 343 126453770 trpD BURPS1106A_3585 - anthranilate phosphoribosyltransferase 3532 67.43 0 3493835..3494620 + 261 126454851 trpC BURPS1106A_3586 - indole-3-glycerol-phosphate synthase 3533 73.46 +1 3494631..3495278 + 215 126451971 - BURPS1106A_3587 - adenylate cyclase 3534 69.84 0 3495320..3496108 + 262 126453114 ung BURPS1106A_3588 - uracil-DNA glycosylase 3535 66.39 0 3496327..3497040 - 237 126454382 azoR BURPS1106A_3589 - FMN-dependent NADH-azoreductase 3536 69.67 0 3497062..3498891 - 609 126453535 - BURPS1106A_3590 - PDZ domain-containing protein 3537 64.47 0 3498991..3499719 - 242 126454603 - BURPS1106A_3591 - putative thiol:disulfide interchange protein DsbC 3538 72.34 0 3499821..3501002 - 393 126451886 - BURPS1106A_3592 - hypothetical protein 3539 77.40 +1 3501049..3501225 - 58 126453064 - BURPS1106A_3593 - hypothetical protein 3540 59.69 -1 3501317..3501445 + 42 126453983 - BURPS1106A_3594 - putative lipoprotein 3541 64.48 0 3501876..3502241 + 121 126451583 - BURPS1106A_3595 - hypothetical protein 3542 65.11 0 3502751..3503845 + 364 126452709 - BURPS1106A_3596 - translation-associated GTPase 3543 68.54 0 3503956..3504168 - 70 126454341 - BURPS1106A_3597 - hypothetical protein 3544 66.16 0 3504167..3504955 + 262 126454466 - BURPS1106A_3598 - putative NADH-quinone oxidoreductase, B subunit 3545 71.58 0 3504969..3505802 + 277 126453751 - BURPS1106A_3599 - hypothetical protein 3546 67.29 0 3505874..3507637 - 587 126454606 gabP BURPS1106A_3600 - GABA permease 3547 70.14 0 3507782..3507925 - 47 126452999 - BURPS1106A_3601 - hypothetical protein 3548 73.96 +1 3507943..3508422 - 159 126452806 - BURPS1106A_3602 - hypothetical protein 3549 72.78 0 3508538..3509518 - 326 126455274 - BURPS1106A_3603 - glycerophosphoryl diester phosphodiesterase family protein 3550 76.95 +1 3509697..3509978 + 93 126454820 - BURPS1106A_3604 - hypothetical protein 3551 64.99 0 3510265..3511932 + 555 126454391 - BURPS1106A_3606 - putative ABC transporter ATP-binding protein 3552 78.06 +1 3511911..3512147 - 78 126451495 - BURPS1106A_3605 - hypothetical protein 3553 67.79 0 3512269..3512892 - 207 126452681 - BURPS1106A_3607 - HAD family hydrolase 3554 71.71 0 3512889..3513602 - 237 126451568 - BURPS1106A_3608 - isochorismatase family protein 3555 71.52 0 3513572..3515386 - 604 126454960 - BURPS1106A_3609 - M24 family metallopeptidase 3556 70.20 0 3515405..3515659 - 84 126453867 - BURPS1106A_3610 - hypothetical protein 3557 77.24 +1 3515656..3515967 - 103 126452438 - BURPS1106A_3611 - hypothetical protein 3558 78.21 +1 3516008..3516241 + 77 126453716 - BURPS1106A_3612 - hypothetical protein 3559 68.43 0 3516253..3517557 + 434 126454338 hemA BURPS1106A_3613 - glutamyl-tRNA reductase 3560 67.59 0 3517624..3518706 + 360 126454756 prfA BURPS1106A_3614 - peptide chain release factor 1 3561 73.78 +1 3518750..3519607 + 285 126452796 hemK BURPS1106A_3615 - protein hemK 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0