version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3036 74.23 +1 3007670..3008806 + 378 126452119 - BURPS1106A_3082 - putative NADP oxidoreductase coenzyme F420-dependent 3037 65.73 0 3008811..3009452 + 213 126454641 - BURPS1106A_3083 - YGGT family membrane protein 3038 66.67 0 3009476..3009832 - 118 126454385 - BURPS1106A_3084 - hypothetical protein 3039 66.67 0 3009856..3010242 - 128 126453489 crcB BURPS1106A_3085 - crcB protein 3040 67.32 0 3010852..3012072 + 406 126453435 - BURPS1106A_3086 - putative lipoprotein 3041 68.12 0 3012340..3013098 - 252 126451950 - BURPS1106A_3087 - hypothetical protein 3042 74.81 +1 3013200..3013334 - 44 126455092 - BURPS1106A_3088 - hypothetical protein 3043 69.54 0 3013312..3014562 - 416 126453621 - BURPS1106A_3089 - NAD-dependent deacetylase 3044 70.55 0 3014957..3015754 + 265 126452731 trmB BURPS1106A_3091 - tRNA (guanine-N(7))-methyltransferase 3045 66.19 0 3015912..3016742 - 276 126453672 - BURPS1106A_3092 - undecaprenyl pyrophosphate phosphatase 3046 65.29 0 3016819..3017400 - 193 126452782 - BURPS1106A_3093 - hypothetical protein 3047 72.73 0 3017397..3017726 - 109 126453247 - BURPS1106A_3094 - hypothetical protein 3048 57.50 -1 3017752..3017871 - 39 126452342 - BURPS1106A_3095 - hypothetical protein 3049 67.81 0 3017896..3019290 + 464 126455007 hemN BURPS1106A_3096 - coproporphyrinogen III oxidase 3050 68.22 0 3019374..3019631 + 85 126455352 - BURPS1106A_3097 - hypothetical protein 3051 62.50 0 3019792..3020895 - 367 126454505 - BURPS1106A_3098 - transposase, IS4 3052 64.98 0 3021095..3021748 + 217 126451653 - BURPS1106A_3099 - putative protein-L-isoaspartate O-methyltransferase 3053 68.79 0 3021757..3022086 + 109 126452692 - BURPS1106A_3100 - rhodanese domain-containing protein 3054 69.07 0 3022179..3023507 - 442 126453446 aptA BURPS1106A_3101 - beta amino acid--pyruvate transaminase 3055 71.17 0 3023504..3023836 - 110 126452713 - BURPS1106A_3102 - hypothetical protein 3056 64.30 0 3023861..3025168 + 435 126453909 - BURPS1106A_3103 - putative amino acid ABC transporter, periplasmic amino acid-binding protein 3057 71.16 0 3025263..3026885 + 540 126455402 - BURPS1106A_3104 - putative amino acid ABC transporter, permease protein 3058 68.16 0 3026887..3028089 + 400 126451529 - BURPS1106A_3105 - putative amino acid ABC transporter, permease protein 3059 68.29 0 3028086..3028949 + 287 126454222 - BURPS1106A_3106 - putative amino acid ABC transporter, ATP-binding protein 3060 69.12 0 3028954..3029646 + 230 126454368 - BURPS1106A_3107 - putative amino acid ABC transporter, ATP-binding protein 3061 73.06 +1 3029866..3030741 + 291 126455428 ureD BURPS1106A_3108 - urease accessory protein UreD 3062 71.05 0 3030790..3030903 + 37 126452285 - BURPS1106A_3109 - hypothetical protein 3063 64.03 0 3030963..3031265 + 100 126453173 ureA BURPS1106A_3110 - urease subunit gamma 3064 69.61 0 3031355..3031660 + 101 126453826 ureB BURPS1106A_3111 - urease subunit beta 3065 68.37 0 3031725..3033431 + 568 126452548 ureC BURPS1106A_3112 - urease subunit alpha 3066 70.83 0 3033449..3034072 + 207 126455370 ureE BURPS1106A_3113 - urease accessory protein UreE 3067 72.01 0 3034029..3034739 + 236 126452298 ureF BURPS1106A_3114 - urease accessory protein UreF 3068 65.75 0 3034770..3035420 + 216 126453111 ureG BURPS1106A_3115 - urease accessory protein UreG 3069 74.68 +1 3035645..3037030 - 461 126453128 waaA BURPS1106A_3116 - 3-deoxy-D-manno-octulosonic-acid transferase 3070 68.81 0 3037068..3037952 - 294 126452533 - BURPS1106A_3117 - hypothetical protein 3071 71.35 0 3037968..3039035 - 355 126452253 rfaC BURPS1106A_3118 - lipopolysaccharide heptosyltransferase I 3072 68.15 0 3039144..3040562 - 472 126454166 - BURPS1106A_3119 - phosphoglucomutase/phosphomannomutase family protein 3073 55.75 -2 3040535..3040708 - 57 126453349 - BURPS1106A_3120 - hypothetical protein 3074 69.44 0 3040721..3042055 + 444 126452894 - BURPS1106A_3121 - hypothetical protein 3075 69.41 0 3042052..3042888 + 278 126451781 - BURPS1106A_3122 - glycosyl transferase, group 2 family protein 3076 69.86 0 3042917..3044074 + 385 126453504 - BURPS1106A_3123 - glycosyl transferase, group 1 family protein 3077 68.62 0 3044089..3045111 + 340 126452926 galE BURPS1106A_3124 - UDP-glucose 4-epimerase 3078 65.76 0 3045139..3046245 + 368 126452284 - BURPS1106A_3125 - glycosyl transferase, group 4 family protein 3079 73.19 +1 3046308..3046445 - 45 126455322 - BURPS1106A_3126 - hypothetical protein 3080 65.15 0 3046619..3048532 - 637 126453946 - BURPS1106A_3127 - capsular polysaccharide biosynthesis protein 3081 60.04 -1 3048539..3049549 - 336 126453366 - BURPS1106A_3128 - glycosyl transferase, group 4 family protein 3082 66.25 0 3049567..3050532 - 321 126452522 - BURPS1106A_3129 - NAD-dependent epimerase/dehydratase family protein 3083 57.76 -1 3050529..3051359 - 276 126451674 - BURPS1106A_3130 - glycosyl transferase, group 2 family protein 3084 60.75 -1 3051434..3053275 - 613 126454769 - BURPS1106A_3131 - glycosyl transferase, group 2 family protein 3085 59.25 -1 3053327..3055051 - 574 126453865 - BURPS1106A_3132 - glycosyl transferase, group 2 family protein 3086 59.32 -1 3055055..3055939 - 294 126452157 - BURPS1106A_3133 - putative glycosyl transferase 3087 60.78 -1 3055999..3057069 - 356 126453040 - BURPS1106A_3134 - NAD-dependent epimerase/dehydratase family protein 3088 56.50 -2 3057090..3058328 - 412 126454457 - BURPS1106A_3135 - putative O-antigen acetylase WbiA 3089 59.23 -1 3058325..3059722 - 465 126455338 - BURPS1106A_3136 - putative lipopolysaccharide ABC transporter, ATP-binding protein 3090 55.64 -2 3059724..3060557 - 277 126455168 - BURPS1106A_3137 - putative lipopolysaccharide ABC transporter, permease protein 3091 63.10 0 3060584..3061480 - 298 126454004 rfbD BURPS1106A_3138 - dTDP-4-dehydrorhamnose reductase 3092 55.98 -2 3061477..3062028 - 183 126452584 rfbC BURPS1106A_3139 - dTDP-4-dehydrorhamnose 3,5-epimerase 3093 63.31 0 3062013..3062906 - 297 126451933 rfbA BURPS1106A_3140 - glucose-1-phosphate thymidylyltransferase 3094 65.07 0 3062918..3063979 - 353 126454814 rfbB BURPS1106A_3141 - dTDP-glucose 4,6-dehydratase 3095 70.67 0 3064357..3065205 + 282 126454155 apaH BURPS1106A_3142 - diadenosine tetraphosphatase 3096 71.26 0 3065335..3066204 - 289 126452991 - BURPS1106A_3143 - acyltransferase domain-containing protein 3097 71.67 0 3066219..3067496 - 425 126452005 pyrC BURPS1106A_3144 - dihydroorotase 3098 66.11 0 3067588..3068673 - 361 126455367 pyrB BURPS1106A_3145 - aspartate carbamoyltransferase catalytic subunit 3099 73.99 +1 3068700..3069218 - 172 126452664 pyrR BURPS1106A_3146 - pyrimidine regulatory protein PyrR 3100 66.21 0 3069205..3069645 - 146 126454156 - BURPS1106A_3147 - Holliday junction resolvase-like protein 3101 65.28 0 3069642..3070220 - 192 126453877 - BURPS1106A_3148 - hypothetical protein 3102 70.73 0 3070307..3070429 - 40 126452339 - BURPS1106A_3149 - hypothetical protein 3103 74.26 +1 3070426..3071676 - 416 126453221 - BURPS1106A_3150 - hypothetical protein 3104 56.14 -2 3071856..3072026 - 56 126453658 - BURPS1106A_3151 - rubredoxin 3105 69.49 0 3072246..3073094 + 282 126454539 - BURPS1106A_3152 - putative phosphomethylpyrimidine kinase 3106 64.05 0 3073525..3075165 - 546 126452878 groEL BURPS1106A_3153 - chaperonin GroEL 3107 60.54 -1 3075213..3075506 - 97 126453024 groES BURPS1106A_3154 - co-chaperonin GroES 3108 47.86 -2 3075641..3075757 + 38 126451903 - BURPS1106A_3156 - hypothetical protein 3109 55.95 -2 3075729..3075896 - 55 126454813 - BURPS1106A_3155 - hypothetical protein 3110 72.34 0 3075877..3076017 - 46 126452871 - BURPS1106A_3157 - hypothetical protein 3111 68.65 0 3076096..3078165 - 689 126451744 - BURPS1106A_3158 - hypothetical protein 3112 64.68 0 3078061..3078261 + 66 126452491 - BURPS1106A_3159 - hypothetical protein 3113 49.06 -2 3078239..3078505 + 88 126454793 - BURPS1106A_3161 - hypothetical protein 3114 48.48 -2 3078479..3078643 - 54 126455449 - BURPS1106A_3160 - hypothetical protein 3115 50.00 -2 3078924..3079061 + 45 126453810 - BURPS1106A_3162 - hypothetical protein 3116 64.14 0 3079313..3079747 - 144 126452115 - BURPS1106A_3163 - putative transcriptional regulator 3117 68.47 0 3079786..3081003 + 405 126454906 - BURPS1106A_3164 - zinc-binding dehydrogenase family oxidoreductase 3118 70.58 0 3081027..3082049 - 340 126454360 - BURPS1106A_3165 - hypothetical protein 3119 71.91 0 3082070..3082546 + 158 126454982 - BURPS1106A_3167 - hypothetical protein 3120 64.15 0 3082540..3083055 - 171 126453243 - BURPS1106A_3166 - hypothetical protein 3121 64.49 0 3083171..3084043 - 290 126452321 - BURPS1106A_3168 - OmpW family outer membrane protein 3122 66.19 0 3084073..3085326 - 417 126452355 - BURPS1106A_3169 - putative lipoprotein 3123 66.23 0 3085386..3086984 - 532 126453208 - BURPS1106A_3170 - hypothetical protein 3124 48.84 -2 3087519..3087647 - 42 126454579 - BURPS1106A_3171 - hypothetical protein 3125 63.81 0 3087644..3088168 - 174 126451464 - BURPS1106A_3172 - PadR family transcriptional regulator 3126 63.86 0 3088221..3089681 + 486 126451525 - BURPS1106A_3173 - metallo-beta-lactamase family protein 3127 69.73 0 3089863..3090450 + 195 126452632 - BURPS1106A_3174 - DNA-binding protein 3128 71.78 0 3090447..3090974 + 175 126454116 - BURPS1106A_3175 - acetyltransferase 3129 68.11 0 3091324..3091947 + 207 126455433 - BURPS1106A_3176 - LysE family translocator protein 3130 68.16 0 3092432..3093568 + 378 126451691 - BURPS1106A_3177 - glycerophosphoryl diester phosphodiesterase 3131 71.59 0 3093698..3095140 + 480 126452508 - BURPS1106A_3178 - EmrB/QacA family drug resistance transporter 3132 66.90 0 3095278..3095700 + 140 126453986 - BURPS1106A_3179 - hypothetical protein 3133 70.34 0 3095637..3096425 + 262 126454973 - BURPS1106A_3180 - hypothetical protein 3134 65.64 0 3096758..3098605 - 615 126452334 - BURPS1106A_3181 - carboxypeptidase C 3135 57.25 -1 3098605..3098742 - 45 126451677 - BURPS1106A_3182 - hypothetical protein 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0