IslandPath Analysis: Burkholderia pseudomallei 1106a



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 67.62   STD DEV: 5.36
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455
4019 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3022	 79.71	+2	2997100..2997306	+	68	126451602	-	BURPS1106A_3068	-	hypothetical protein
3023	 68.43	0	2997339..2998475	+	378	126453401	ribBA	BURPS1106A_3069	-	bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein
3024	 63.79	0	2998555..2999076	+	173	126454314	ribH	BURPS1106A_3070	-	riboflavin synthase subunit beta
3025	 66.44	0	2999073..2999510	+	145	126452933	nusB	BURPS1106A_3071	-	transcription antitermination protein NusB
3026	 69.43	0	2999575..3000768	+	397	126453812	-	BURPS1106A_3072	-	aminotransferase
3027	 62.38	0	3001017..3001226	+	69	126455002	-	BURPS1106A_3073	-	hypothetical protein
3028	 69.72	0	3001395..3002507	-	370	126452365	-	BURPS1106A_3074	-	Slt family transglycosylase
3029	 68.27	0	3003087..3004646	+	519	126454327	ubiD	BURPS1106A_3075	-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
3030	 69.91	0	3004684..3005361	+	225	126453975	-	BURPS1106A_3076	-	LysE family translocator protein
3031	 72.50	0	3005422..3005541	+	39	126452889	-	BURPS1106A_3077	-	hypothetical protein
3032	 70.73	0	3005808..3006791	-	327	126451736	-	BURPS1106A_3078	-	serine/threonine dehydratase
3033	 68.89	0	3006780..3006959	+	59	126453457	-	BURPS1106A_3080	-	hypothetical protein
3034	 70.75	0	3006953..3007246	-	97	126454584	-	BURPS1106A_3079	-	hypothetical protein
3035	 67.64	0	3007277..3007585	-	102	126453912	-	BURPS1106A_3081	-	hypothetical protein
3036	 74.23	+1	3007670..3008806	+	378	126452119	-	BURPS1106A_3082	-	putative NADP oxidoreductase coenzyme F420-dependent
3037	 65.73	0	3008811..3009452	+	213	126454641	-	BURPS1106A_3083	-	YGGT family membrane protein
3038	 66.67	0	3009476..3009832	-	118	126454385	-	BURPS1106A_3084	-	hypothetical protein
3039	 66.67	0	3009856..3010242	-	128	126453489	crcB	BURPS1106A_3085	-	crcB protein
3040	 67.32	0	3010852..3012072	+	406	126453435	-	BURPS1106A_3086	-	putative lipoprotein
3041	 68.12	0	3012340..3013098	-	252	126451950	-	BURPS1106A_3087	-	hypothetical protein
3042	 74.81	+1	3013200..3013334	-	44	126455092	-	BURPS1106A_3088	-	hypothetical protein
3043	 69.54	0	3013312..3014562	-	416	126453621	-	BURPS1106A_3089	-	NAD-dependent deacetylase
3044	 70.55	0	3014957..3015754	+	265	126452731	trmB	BURPS1106A_3091	-	tRNA (guanine-N(7))-methyltransferase
3045	 66.19	0	3015912..3016742	-	276	126453672	-	BURPS1106A_3092	-	undecaprenyl pyrophosphate phosphatase
3046	 65.29	0	3016819..3017400	-	193	126452782	-	BURPS1106A_3093	-	hypothetical protein
3047	 72.73	0	3017397..3017726	-	109	126453247	-	BURPS1106A_3094	-	hypothetical protein
3048	 57.50	-1	3017752..3017871	-	39	126452342	-	BURPS1106A_3095	-	hypothetical protein
3049	 67.81	0	3017896..3019290	+	464	126455007	hemN	BURPS1106A_3096	-	coproporphyrinogen III oxidase
3050	 68.22	0	3019374..3019631	+	85	126455352	-	BURPS1106A_3097	-	hypothetical protein
3051	 62.50	0	3019792..3020895	-	367