version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2478 70.32 0 2461387..2462619 + 410 126454437 - BURPS1106A_2504 - hypothetical protein 2479 65.82 0 2462676..2463503 + 275 126454271 dapD BURPS1106A_2505 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 2480 69.33 0 2463503..2463877 + 124 126453365 - BURPS1106A_2506 - ArsC family protein 2481 69.12 0 2463951..2465090 + 379 126454487 dapE BURPS1106A_2507 - succinyl-diaminopimelate desuccinylase 2482 69.48 0 2465104..2466027 + 307 126453622 - BURPS1106A_2508 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2483 68.82 0 2466270..2467709 + 479 126453036 cls BURPS1106A_2509 - cardiolipin synthetase 2484 61.25 -1 2467813..2468292 - 159 126453862 bsaA BURPS1106A_2510 - glutathione peroxidase 2485 68.52 0 2468438..2470378 + 646 126454765 - BURPS1106A_2511 - ABC transporter, ATP-binding protein 2486 68.52 0 2470466..2470735 - 89 126453282 - BURPS1106A_2512 - hypothetical protein 2487 68.48 0 2470896..2472272 - 458 126454994 radA BURPS1106A_2513 - DNA repair protein RadA 2488 70.68 0 2472283..2473353 - 356 126454140 alr BURPS1106A_2514 - alanine racemase 2489 65.56 0 2473517..2474872 + 451 126453215 - BURPS1106A_2515 - hypothetical protein 2490 72.10 0 2474983..2475792 + 269 126452411 thiD BURPS1106A_2516 - phosphomethylpyrimidine kinase 2491 71.69 0 2476036..2476254 - 72 126454538 - BURPS1106A_2517 - hypothetical protein 2492 73.39 +1 2476218..2477198 - 326 126453736 - BURPS1106A_2518 - hypothetical protein 2493 74.63 +1 2477195..2478562 - 455 126454213 - BURPS1106A_2519 - uracil-DNA glycosylase 2494 66.67 0 2478549..2479046 - 165 126455441 rimI BURPS1106A_2520 - ribosomal-protein-alanine acetyltransferase 2495 77.20 +1 2479043..2479792 - 249 126451539 - BURPS1106A_2521 - glycoprotease family protein 2496 62.22 -1 2479974..2480243 + 89 126452636 - BURPS1106A_2522 - acyl-CoA-binding protein 2497 72.24 0 2480689..2482230 + 513 126453899 - BURPS1106A_2523 - DEAD/DEAH box helicase 2498 64.91 0 2482622..2483929 + 435 126453955 aceA BURPS1106A_2524 - isocitrate lyase 2499 66.90 0 2484189..2484623 - 144 126455163 - BURPS1106A_2525 - universal stress family protein 2500 70.10 0 2484903..2485805 - 300 126452276 - BURPS1106A_2526 - LysR family transcriptional regulator 2501 73.26 +1 2485944..2486747 + 267 126453426 dehII BURPS1106A_2527 - haloacid dehalogenase, type II 2502 65.73 0 2486800..2488392 + 530 126453591 aceB BURPS1106A_2528 - malate synthase 2503 70.00 0 2488754..2488873 - 39 126452715 - BURPS1106A_2529 - hypothetical protein 2504 68.97 0 2489037..2489471 - 144 126452507 - BURPS1106A_2530 - hypothetical protein 2505 71.89 0 2489492..2489989 - 165 126451685 rraA BURPS1106A_2531 - ribonuclease activity regulator protein RraA 2506 72.11 0 2490119..2490982 + 287 126454131 - BURPS1106A_2532 - AraC family transcriptional regulator 2507 63.69 0 2490979..2491146 + 55 126453382 - BURPS1106A_2533 - hypothetical protein 2508 64.53 0 2491586..2492053 - 155 126454860 - BURPS1106A_2534 - acetyltransferase 2509 62.67 0 2492052..2492201 + 49 126453951 - BURPS1106A_2535 - hypothetical protein 2510 67.00 0 2493139..2494653 - 504 126451684 gltX BURPS1106A_2541 - glutamyl-tRNA synthetase 2511 71.26 0 2495005..2496048 + 347 126455403 - BURPS1106A_2542 - patatin family phospholipase 2512 65.14 0 2496221..2496877 - 218 126452477 - BURPS1106A_2543 - NlpC/P60 domain-containing protein 2513 70.12 0 2497061..2498710 - 549 126452152 - BURPS1106A_2544 - peptide/opine/nickel uptake ABC transporter ATP-binding protein 2514 67.76 0 2498707..2499804 - 365 126455223 - BURPS1106A_2545 - ABC transporter, permease protein 2515 65.42 0 2499806..2500846 - 346 126454916 - BURPS1106A_2546 - ABC transporter, permease protein 2516 70.51 0 2501035..2502987 - 650 126453009 - BURPS1106A_2547 - ABC transporter, periplasmic substrate-binding protein 2517 66.04 0 2503108..2503899 + 263 126452540 fabI BURPS1106A_2548 - enoyl-(acyl carrier protein) reductase 2518 72.60 0 2504152..2504505 - 117 126451656 - BURPS1106A_2549 - hypothetical protein 2519 66.67 0 2504794..2504910 - 38 126452482 - BURPS1106A_2550 - hypothetical protein 2520 68.25 0 2505214..2507547 - 777 126451671 - BURPS1106A_2551 - molybdopterin oxidoreductase 2521 67.05 0 2507605..2507865 + 86 126455109 - BURPS1106A_2552 - hypothetical protein 2522 63.82 0 2508040..2508813 - 257 126451722 fpr BURPS1106A_2553 - ferredoxin--NADP reductase 2523 69.83 0 2508699..2509742 - 347 126451739 - BURPS1106A_2554 - hypothetical protein 2524 64.90 0 2509915..2510253 - 112 126454614 - BURPS1106A_2555 - putative ferredoxin 2525 65.25 0 2510384..2511298 + 304 126453521 - BURPS1106A_2556 - TetR family transcriptional regulator 2526 69.60 0 2511372..2512190 - 272 126452369 map BURPS1106A_2557 - methionine aminopeptidase, type I 2527 64.89 0 2512190..2512414 - 74 126452198 - BURPS1106A_2558 - hypothetical protein 2528 69.12 0 2512405..2512689 - 94 126455329 - BURPS1106A_2559 - pseudouridine synthase, Rsu 2529 70.87 0 2512698..2515412 - 904 126454134 - BURPS1106A_2560 - argininosuccinate lyase 2530 68.54 0 2515492..2516556 - 354 126452722 - BURPS1106A_2561 - cysteine synthase/cystathionine beta-synthase family protein 2531 68.75 0 2516561..2517760 - 399 126452895 - BURPS1106A_2562 - GHMP kinase domain-containing protein 2532 68.63 0 2517783..2518748 - 321 126452905 cysD BURPS1106A_2563 - sulfate adenylyltransferase subunit 2 2533 66.79 0 2518904..2519722 - 272 126453005 - BURPS1106A_2564 - glycosyl transferase, group 2 family protein 2534 67.31 0 2519813..2520907 - 364 126452158 serC-2 BURPS1106A_2565 - phosphoserine aminotransferase 2535 65.78 0 2520948..2522075 - 375 126454148 - BURPS1106A_2566 - acyltransferase family protein 2536 73.26 +1 2522127..2523278 - 383 126453216 - BURPS1106A_2567 - hypothetical protein 2537 71.93 0 2523275..2524186 - 303 126452363 - BURPS1106A_2568 - transketolase domain-containing protein 2538 71.39 0 2524183..2525007 - 274 126454534 - BURPS1106A_2569 - transketolase domain-containing protein 2539 74.01 +1 2525027..2526115 - 362 126454284 - BURPS1106A_2570 - hypothetical protein 2540 66.28 0 2526109..2526888 - 259 126453378 - BURPS1106A_2571 - hypothetical protein 2541 67.61 0 2526908..2527756 - 282 126451545 - BURPS1106A_2572 - hypothetical protein 2542 69.40 0 2527826..2528704 - 292 126451902 - BURPS1106A_2573 - dioxygenase, TauD/TfdA 2543 68.17 0 2528709..2529506 - 265 126453344 - BURPS1106A_2574 - hypothetical protein 2544 72.10 0 2529503..2538442 - 2979 126453674 - BURPS1106A_2575 - non-ribosomal peptide synthase 2545 72.38 0 2538526..2539926 - 466 126455089 - BURPS1106A_2576 - hypothetical protein 2546 72.09 0 2540160..2540288 - 42 126452187 - BURPS1106A_2577 - hypothetical protein 2547 72.20 0 2540285..2541586 - 433 126455052 - BURPS1106A_2578 - major facilitator family transporter 2548 73.08 +1 2541654..2543492 - 612 126452346 - BURPS1106A_2579 - amino acid adenylation domain-containing protein 2549 73.06 +1 2543543..2545012 - 489 126451714 cysC BURPS1106A_2580 - adenylylsulfate kinase 2550 68.49 0 2545597..2545815 + 72 126454105 - BURPS1106A_2581 - hypothetical protein 2551 73.66 +1 2546148..2546390 + 80 126454297 - BURPS1106A_2582 - hypothetical protein 2552 70.79 0 2546484..2547719 + 411 126451497 - BURPS1106A_2583 - RND family efflux transporter MFP subunit 2553 67.68 0 2547716..2550862 + 1048 126454028 - BURPS1106A_2584 - AcrB/AcrD/AcrF family protein 2554 70.68 0 2550940..2552160 + 406 126455190 - BURPS1106A_2585 - hypothetical protein 2555 68.69 0 2552199..2554031 - 610 126454868 - BURPS1106A_2586 - GDSL-like lipase/acylhydrolase domain/outer membrane autotransporter barrel domain-containing protein 2556 70.87 0 2554225..2555271 - 348 126451949 - BURPS1106A_2587 - hypothetical protein 2557 53.09 -2 2555273..2555434 - 53 126452516 - BURPS1106A_2588 - hypothetical protein 2558 50.79 -2 2555610..2555735 - 41 126453677 - BURPS1106A_2589 - hypothetical protein 2559 62.83 0 2556557..2557807 - 416 126451837 - BURPS1106A_2591 - aspartate kinase 2560 63.79 0 2557790..2558032 + 80 126454573 - BURPS1106A_2592 - hypothetical protein 2561 73.09 +1 2558148..2559626 - 492 126454111 tilS BURPS1106A_2593 - tRNA(Ile)-lysidine synthetase 2562 65.33 0 2559670..2560641 - 323 126454581 accA BURPS1106A_2594 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 2563 69.22 0 2560745..2561683 - 312 126455439 - BURPS1106A_2595 - base excision DNA repair protein 2564 65.31 0 2561731..2563128 - 465 126452065 cysS BURPS1106A_2596 - cysteinyl-tRNA synthetase 2565 71.78 0 2563360..2564082 + 240 126453018 - BURPS1106A_2597 - TPR repeat-containing protein 2566 64.58 0 2564139..2564714 + 191 126453901 - BURPS1106A_2598 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 2567 59.96 -1 2564795..2565286 + 163 126452469 ppiB BURPS1106A_2599 - peptidyl-prolyl cis-trans isomerase B 2568 69.12 0 2565338..2566111 + 257 126453331 lpxH BURPS1106A_2600 - UDP-2,3-diacylglucosamine hydrolase 2569 70.26 0 2566180..2566374 - 64 126454157 - BURPS1106A_2601 - hypothetical protein 2570 70.99 0 2566447..2567232 - 261 126455042 cysE BURPS1106A_2602 - serine O-acetyltransferase 2571 62.96 0 2567134..2567322 + 62 126451881 - BURPS1106A_2603 - hypothetical protein 2572 70.94 0 2567423..2568358 - 311 126454106 - BURPS1106A_2604 - RNA methyltransferase 2573 65.05 0 2568659..2569462 + 267 126453367 - BURPS1106A_2605 - inositol monophosphatase family protein 2574 57.88 -1 2569742..2570014 - 90 126454919 - BURPS1106A_2606 - hypothetical protein 2575 61.11 -1 2570198..2570377 - 59 126453600 - BURPS1106A_2607 - hypothetical protein 2576 62.36 0 2570687..2571847 + 386 126453150 - BURPS1106A_2608 - ISBma1, transposase 2577 54.55 -2 2571863..2571994 - 43 126451826 - BURPS1106A_2609 - hypothetical protein 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0