version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 154 64.46 0 146666..149386 - 906 126453699 topB BURPS1106A_0155 - DNA topoisomerase III 155 65.32 0 149486..149857 - 123 126454243 - BURPS1106A_0156 - hypothetical protein 156 72.95 0 149917..151221 - 434 126455418 dprA BURPS1106A_0157 - DNA protecting protein DprA 157 67.50 0 151218..151337 - 39 126452019 - BURPS1106A_0158 - hypothetical protein 158 61.48 -1 151300..151839 + 179 126453149 def BURPS1106A_0159 - polypeptide deformylase 159 72.76 0 151871..152854 + 327 126454119 fmt BURPS1106A_0160 - methionyl-tRNA formyltransferase 160 67.48 0 152870..152992 - 40 126455012 - BURPS1106A_0161 - hypothetical protein 161 66.82 0 152975..153610 + 211 126451862 - BURPS1106A_0162 - LysE family translocator protein 162 65.15 0 153720..154577 + 285 126452704 - BURPS1106A_0163 - heat shock protein HtpX 163 71.70 0 154758..155174 + 138 126454661 - BURPS1106A_0164 - acetate permease 164 72.48 0 155171..156580 + 469 126451630 sun BURPS1106A_0165 - ribosomal RNA small subunit methyltransferase B 165 64.30 0 156577..157167 + 196 126452437 - BURPS1106A_0166 - hypothetical protein 166 66.75 0 157169..159577 + 802 126453271 - BURPS1106A_0167 - sensor histidine kinase 167 69.01 0 159578..160261 + 227 126453538 - BURPS1106A_0168 - Fis family DNA-binding response regulator 168 68.47 0 160528..160749 + 73 126454381 - BURPS1106A_0170 - hypothetical protein 169 66.39 0 160730..161464 + 244 126455276 - BURPS1106A_0171 - exsB protein 170 66.35 0 161558..162190 + 210 126452181 - BURPS1106A_0172 - hypothetical protein 171 62.69 0 162210..162662 + 150 126452633 - BURPS1106A_0173 - putative 6-pyruvoyl tetrahydropterin synthase 172 63.83 0 162709..162849 + 46 126451563 - BURPS1106A_0174 - hypothetical protein 173 73.16 +1 163087..163872 + 261 126454865 - BURPS1106A_0175 - HpcH/HpaI aldolase/citrate lyase family protein 174 74.13 +1 163869..164645 + 258 126453702 - BURPS1106A_0176 - hypothetical protein 175 65.36 0 165022..166170 - 382 126453176 rodA BURPS1106A_0177 - rod shape-determining protein RodA 176 68.93 0 166182..168611 - 809 126454848 - BURPS1106A_0178 - putative penicillin-binding protein 177 68.23 0 168795..169307 - 170 126455244 mreD BURPS1106A_0179 - rod shape-determining protein MreD 178 71.23 0 169304..170377 - 357 126454150 mreC BURPS1106A_0180 - rod shape-determining protein MreC 179 64.94 0 170497..171540 - 347 126452347 mreB BURPS1106A_0181 - rod shape-determining protein MreB 180 67.33 0 171906..172205 + 99 126455226 gatC BURPS1106A_0182 - aspartyl/glutamyl-tRNA amidotransferase subunit C 181 70.22 0 172318..173808 + 496 126455152 gatA BURPS1106A_0183 - aspartyl/glutamyl-tRNA amidotransferase subunit A 182 65.65 0 173811..175283 + 490 126453954 gatB BURPS1106A_0184 - aspartyl/glutamyl-tRNA amidotransferase subunit B 183 65.95 0 175410..176249 + 279 126453377 - BURPS1106A_0185 - polyphosphate kinase 184 62.39 0 176281..177051 + 256 126452249 xth BURPS1106A_0186 - exodeoxyribonuclease III 185 65.92 0 177346..178410 - 354 126453715 - BURPS1106A_0187 - zinc-binding dehydrogenase family oxidoreductase 186 70.26 0 178620..179564 + 314 126452647 - BURPS1106A_0188 - AraC family transcriptional regulator 187 73.31 +1 179938..180990 - 350 126452125 - BURPS1106A_0189 - hypothetical protein 188 66.97 0 180980..182293 - 437 126454886 - BURPS1106A_0190 - major facilitator transporter 189 63.58 0 182305..182919 - 204 126454422 metW BURPS1106A_0191 - methionine biosynthesis protein MetW 190 66.58 0 182916..184061 - 381 126453127 metX BURPS1106A_0192 - homoserine O-acetyltransferase 191 68.41 0 184414..185103 - 229 126454066 slmA BURPS1106A_0193 - nucleoid occlusion protein 192 70.15 0 185070..185873 - 267 126453385 - BURPS1106A_0194 - HAD-superfamily hydrolase 193 64.22 0 185870..186769 - 299 126452255 argB BURPS1106A_0195 - acetylglutamate kinase 194 65.85 0 186946..187068 - 40 126451498 - BURPS1106A_0196 - hypothetical protein 195 78.17 +1 187094..187345 + 83 126454885 - BURPS1106A_0197 - hypothetical protein 196 69.01 0 187363..188643 + 426 126453480 - BURPS1106A_0198 - sensor histidine kinase 197 66.30 0 188663..189205 + 180 126452974 - BURPS1106A_0199 - Fis family DNA-binding response regulator 198 64.29 0 189632..190975 - 447 126452107 hslU BURPS1106A_0200 - ATP-dependent protease ATP-binding subunit 199 68.87 0 190985..191620 - 211 126451912 hslV BURPS1106A_0201 - ATP-dependent protease peptidase subunit 200 73.50 +1 191626..191742 - 38 126452750 - BURPS1106A_0202 - hypothetical protein 201 60.67 -1 191783..192199 - 138 126455040 dksA BURPS1106A_0203 - RNA polymerase-binding protein DksA 202 66.38 0 192254..192598 - 114 126452341 - BURPS1106A_0204 - hypothetical protein 203 62.12 -1 192760..193836 - 358 126453239 - BURPS1106A_0205 - CobW/P47K family protein 204 70.50 0 194014..195291 - 425 126454780 - BURPS1106A_0206 - hypothetical protein 205 69.67 0 195380..196312 - 310 126451479 xerC BURPS1106A_0207 - site-specific tyrosine recombinase XerC 206 71.14 0 196357..197094 - 245 126452571 - BURPS1106A_0208 - hypothetical protein 207 70.57 0 197118..197987 - 289 126453808 dapF BURPS1106A_0209 - diaminopimelate epimerase 208 66.33 0 198028..198912 - 294 126454911 htrB BURPS1106A_0210 - lipid A biosynthesis lauroyl acyltransferase 209 67.09 0 199179..200366 + 395 126451461 metK BURPS1106A_0211 - S-adenosylmethionine synthetase 210 73.45 +1 200534..200887 - 117 126452679 - BURPS1106A_0212 - hypothetical protein 211 66.22 0 201131..202024 + 297 126454571 - BURPS1106A_0213 - phytanoyl-CoA dioxygenase (PhyH) family protein 212 69.40 0 202108..202290 - 60 126451701 - BURPS1106A_0214 - hypothetical protein 213 64.73 0 202307..202513 - 68 126452493 - BURPS1106A_0215 - hypothetical protein 214 65.61 0 202592..203731 + 379 126454356 - BURPS1106A_0216 - aldo/keto reductase family oxidoreductase 215 68.28 0 203818..204003 - 61 126454634 - BURPS1106A_0217 - hypothetical protein 216 71.14 0 204271..205209 - 312 126451814 - BURPS1106A_0218 - hypothetical protein 217 73.00 +1 205256..205492 - 78 126453971 - BURPS1106A_0219 - hypothetical protein 218 71.86 0 205489..206778 - 429 126455134 - BURPS1106A_0220 - major facilitator family transporter 219 65.59 0 206841..207026 - 61 126453988 - BURPS1106A_0221 - hypothetical protein 220 56.82 -2 207002..207133 - 43 126455185 - BURPS1106A_0222 - hypothetical protein 221 65.26 0 207132..207344 + 70 126453733 - BURPS1106A_0223 - hypothetical protein 222 69.09 0 207385..208416 + 343 126454046 - BURPS1106A_0224 - serine/threonine protein kinase 223 74.40 +1 208693..209028 - 111 126452557 - BURPS1106A_0225 - hypothetical protein 224 68.50 0 209085..210503 - 472 126452218 - BURPS1106A_0226 - putative coniferyl aldehyde dehydrogenase 225 69.82 0 210538..212217 - 559 126454819 - BURPS1106A_0227 - acyl-CoA dehydrogenase domain-containing protein 226 69.16 0 212451..214094 + 547 126453931 - BURPS1106A_0228 - GMC family oxidoreductase 227 76.62 +1 214134..215510 - 458 126454663 fliK BURPS1106A_0229 - flagellar hook-length control protein FliK 228 71.52 0 215567..216019 - 150 126453479 fliJ BURPS1106A_0230 - flagellar export protein FliJ 229 72.52 0 216025..217596 - 523 126453967 fliI BURPS1106A_0231 - flagellar protein export ATPase FliI 230 73.86 +1 217590..218270 - 226 126453050 fliH BURPS1106A_0232 - flagellar assembly protein H 231 64.66 0 218263..219258 - 331 126452132 fliG BURPS1106A_0233 - flagellar motor switch protein G 232 69.78 0 219248..221044 - 598 126453288 fliF BURPS1106A_0234 - flagellar MS-ring protein 233 65.50 0 221293..221634 + 113 126453483 fliE BURPS1106A_0235 - flagellar hook-basal body complex protein FliE 234 66.67 0 221756..222190 + 144 126454587 fliS BURPS1106A_0236 - flagellar protein FliS 235 69.11 0 222187..222513 + 108 126454593 - BURPS1106A_0237 - hypothetical protein 236 78.51 +2 222623..224125 + 500 126451708 - BURPS1106A_0238 - hypothetical protein 237 72.33 0 224122..224439 + 105 126452833 - BURPS1106A_0239 - putative flagellar biosynthesis protein 238 70.69 0 224659..225378 + 239 126455053 - BURPS1106A_0240 - hypothetical protein 239 71.35 0 225466..226491 - 341 126452863 - BURPS1106A_0241 - putative xanthine dehydrogenase accessory factor 240 67.81 0 226690..228093 - 467 126452851 - BURPS1106A_0242 - amino acid permease 241 64.99 0 228335..228991 - 218 126453572 - BURPS1106A_0243 - LuxR family DNA-binding response regulator 242 77.00 +1 228988..229848 - 286 126454303 - BURPS1106A_0244 - putative sensor histidine kinase 243 63.55 0 230262..231032 - 256 126452194 - BURPS1106A_0245 - putative ferredoxin--NADP reductase 244 72.78 0 231245..231898 - 217 126453008 - BURPS1106A_0246 - LysE family translocator protein 245 72.32 0 231964..232776 - 270 126454198 - BURPS1106A_0247 - endonuclease/exonuclease/phosphatase family protein 246 72.16 0 232783..233346 - 187 126454807 - BURPS1106A_0248 - hypothetical protein 247 71.35 0 233370..233561 + 63 126452164 - BURPS1106A_0249 - hypothetical protein 248 67.28 0 233707..234687 + 326 126453536 - BURPS1106A_0250 - ATP-dependent protease domain-containing protein 249 71.03 0 234759..235880 + 373 126454680 - BURPS1106A_0251 - FAD-dependent oxidoreductase 250 66.35 0 236015..236329 + 104 126452268 hip BURPS1106A_0252 - high-potential iron-sulfur protein 251 67.67 0 236562..237854 + 430 126454714 - BURPS1106A_0253 - major facilitator family transporter 252 64.52 0 237900..238085 + 61 126452735 - BURPS1106A_0255 - hypothetical protein 253 53.59 -2 238076..238228 - 50 126451527 - BURPS1106A_0254 - hypothetical protein 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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