version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1948 70.44 0 1935116..1935274 - 52 126452233 - BURPS1106A_1968 - hypothetical protein 1949 77.10 +1 1935290..1936516 + 408 126453534 cobL BURPS1106A_1969 - precorrin-6Y C5,15-methyltransferase (decarboxylating) 1950 73.33 +1 1936513..1937607 + 364 126455155 cbiD BURPS1106A_1970 - cobalt-precorrin-6A synthase 1951 78.37 +2 1937604..1938338 + 244 126452294 cobK BURPS1106A_1971 - cobalt-precorrin-6x reductase 1952 71.21 0 1938677..1939402 + 241 126452848 cobM BURPS1106A_1972 - precorrin-4 C11-methyltransferase 1953 70.37 0 1939481..1941046 - 521 126453950 - BURPS1106A_1973 - putative lipoprotein 1954 75.70 +1 1941176..1942360 - 394 126451808 - BURPS1106A_1974 - major facilitator family transporter 1955 72.12 0 1942484..1942978 + 164 126452741 - BURPS1106A_1975 - MarR family transcriptional regulator 1956 76.87 +1 1943133..1943279 - 48 126453202 - BURPS1106A_1976 - hypothetical protein 1957 69.21 0 1943286..1944584 - 432 126452565 - BURPS1106A_1977 - putative transporter, periplasmic substrate-binding protein 1958 72.73 0 1944622..1944753 - 43 126453473 - BURPS1106A_1978 - MarR family transcriptional regulator 1959 71.72 0 1944726..1945160 - 144 126454615 - BURPS1106A_1979 - transcriptional regulator 1960 65.53 0 1945703..1946407 - 234 126452802 - BURPS1106A_1980 - putative glutathione S-transferase 1961 70.58 0 1946692..1947612 - 306 126454207 - BURPS1106A_1981 - LysR family transcriptional regulator 1962 74.22 +1 1947710..1948159 + 149 126455000 - BURPS1106A_1982 - hypothetical protein 1963 72.08 0 1948156..1948950 + 264 126452344 - BURPS1106A_1983 - short chain dehydrogenase 1964 78.97 +2 1949042..1949236 + 64 126452566 - BURPS1106A_1985 - hypothetical protein 1965 69.64 0 1949193..1950134 - 313 126452232 arcC BURPS1106A_1984 - carbamate kinase 1966 64.99 0 1950220..1951230 - 336 126454759 arcB BURPS1106A_1986 - ornithine carbamoyltransferase 1967 67.21 0 1951295..1952572 - 425 126453511 arcA BURPS1106A_1987 - arginine deiminase 1968 66.67 0 1952569..1954029 - 486 126453054 arcD BURPS1106A_1988 - arginine/ornithine antiporter 1969 66.44 0 1954012..1954461 + 149 126451754 - BURPS1106A_1989 - hypothetical protein 1970 50.30 -2 1954508..1954672 + 54 126454950 - BURPS1106A_1990 - hypothetical protein 1971 75.79 +1 1954791..1955327 - 178 126453764 - BURPS1106A_1991 - hypothetical protein 1972 73.75 +1 1955363..1956181 - 272 126453122 - BURPS1106A_1992 - amine ABC transporter, permease protein 1973 73.70 +1 1956178..1957116 - 312 126452251 - BURPS1106A_1993 - amine ABC transporter, ATP-binding protein 1974 75.76 +1 1957113..1958333 - 406 126455455 - BURPS1106A_1994 - amine ABC transporter, permease protein 1975 67.94 0 1958330..1959268 - 312 126452444 - BURPS1106A_1995 - amine ABC transporter, periplasmic amine-binding protein 1976 62.50 0 1959514..1959633 + 39 126455175 - BURPS1106A_1996 - hypothetical protein 1977 69.91 0 1959630..1960400 + 256 126452860 - BURPS1106A_1997 - putative methyltransferase UbiE 1978 74.79 +1 1960757..1962160 - 467 126454631 - BURPS1106A_1998 - major facilitator family transporter 1979 72.94 0 1962231..1964207 - 658 126453478 - BURPS1106A_1999 - acyl-CoA synthetase 1980 61.38 -1 1964607..1964795 + 62 126453374 - BURPS1106A_2000 - hypothetical protein 1981 67.71 0 1964832..1965119 - 95 126452247 - BURPS1106A_2001 - hypothetical protein 1982 69.88 0 1965509..1967251 + 580 126452078 - BURPS1106A_2002 - methyl-accepting chemotaxis protein 1983 67.25 0 1967289..1967801 + 170 126454971 cheW BURPS1106A_2003 - chemotaxis protein CheW 1984 76.19 +1 1967844..1967969 + 41 126452648 - BURPS1106A_2004 - hypothetical protein 1985 75.52 +1 1967992..1968183 - 63 126451774 - BURPS1106A_2005 - hypothetical protein 1986 73.70 +1 1968220..1968930 - 236 126453870 - BURPS1106A_2006 - mtultidrug ABC transporter permease 1987 72.16 0 1969095..1969895 - 266 126453949 - BURPS1106A_2007 - AraC family transcriptional regulator 1988 71.79 0 1969878..1970072 + 64 126451847 - BURPS1106A_2008 - oxidoreductase 1989 68.71 0 1970243..1971466 + 407 126454684 - BURPS1106A_2009 - outer membrane porin 1990 72.96 0 1971697..1971966 + 89 126453464 - BURPS1106A_2011 - hypothetical protein 1991 70.55 0 1971924..1973801 - 625 126454659 - BURPS1106A_2010 - putative non-ribosomal peptide synthase 1992 59.66 -1 1974960..1975844 + 294 126453337 - BURPS1106A_2012 - JmjC domain-containing protein 1993 64.59 0 1975906..1976916 + 336 126452208 - BURPS1106A_2013 - putative histidinol-phosphate aminotransferase HisC 1994 60.39 -1 1976944..1978026 + 360 126454002 - BURPS1106A_2014 - hypothetical protein 1995 61.90 -1 1978082..1978900 + 272 126451800 - BURPS1106A_2015 - putative formyltransferase 1996 66.17 0 1978941..1980155 + 404 126451449 argG BURPS1106A_2016 - argininosuccinate synthase 1997 68.38 0 1980152..1981552 + 466 126452580 argH BURPS1106A_2017 - argininosuccinate lyase 1998 67.00 0 1981570..1982466 + 298 126453654 - BURPS1106A_2018 - GHMP kinase ATP-binding subunit 1999 64.07 0 1982520..1983752 + 410 126454562 - BURPS1106A_2019 - major facilitator family transporter 2000 71.03 0 1983749..1984390 + 213 126452989 - BURPS1106A_2020 - hypothetical protein 2001 70.39 0 1984387..1985514 + 375 126452738 - BURPS1106A_2021 - cysteine synthase 2002 73.03 +1 1985549..1988251 + 900 126454180 - BURPS1106A_2022 - argininosuccinate lyase 2003 71.49 0 1988294..1989454 + 386 126454958 - BURPS1106A_2023 - L-allo-threonine aldolase 2004 67.14 0 1989451..1990083 + 210 126452385 - BURPS1106A_2024 - acetyltransferase 2005 72.72 0 1990080..2008898 + 6272 126453313 - BURPS1106A_2025 - putative syringomycin synthetase 2006 58.33 -1 2008904..2009023 + 39 126452350 - BURPS1106A_2026 - hypothetical protein 2007 65.68 0 2008989..2010710 + 573 126454991 - BURPS1106A_2027 - carbamoyltransferase family protein 2008 73.70 +1 2010835..2013207 + 790 126454080 - BURPS1106A_2028 - putative penicillin amidase 2009 66.67 0 2014661..2014972 + 103 126452733 - BURPS1106A_2029 - hypothetical protein 2010 63.04 0 2015036..2015917 + 293 126451597 - BURPS1106A_2030 - hypothetical protein 2011 66.67 0 2015907..2016686 + 259 126454541 - BURPS1106A_2031 - hypothetical protein 2012 66.87 0 2016692..2017195 + 167 126453399 - BURPS1106A_2032 - hypothetical protein 2013 66.67 0 2017261..2017902 + 213 126452190 - BURPS1106A_2033 - putative transmembrane protein DUF1109 2014 70.09 0 2017921..2018562 - 213 126453352 - BURPS1106A_2034 - putative transmembrane protein DUF1109 2015 63.13 0 2018559..2019095 - 178 126452202 - BURPS1106A_2035 - RNA polymerase sigma factor 2016 64.94 0 2019254..2019427 - 57 126454953 - BURPS1106A_2036 - hypothetical protein 2017 61.29 -1 2020016..2020294 + 92 126452340 - BURPS1106A_2037 - transposase subunit; putative 2018 64.53 0 2020431..2020805 + 124 126454649 - BURPS1106A_2038 - rhodanese domain-containing protein 2019 69.16 0 2020858..2022138 - 426 126451874 amaB BURPS1106A_2039 - allantoate amidohydrolase 2020 69.26 0 2022135..2023520 - 461 126453113 - BURPS1106A_2040 - putative D-hydantoinase 2021 65.99 0 2023620..2024510 + 296 126453947 - BURPS1106A_2041 - LysR family transcriptional regulator 2022 68.22 0 2024691..2025782 + 363 126451937 - BURPS1106A_2042 - hypothetical protein 2023 67.76 0 2025801..2027441 + 546 126452716 - BURPS1106A_2043 - urocanate hydratase 2024 69.46 0 2027478..2028800 + 440 126453686 - BURPS1106A_2044 - MFS transporter, metabolite:H+ symporter (MHS) family protein 2025 69.30 0 2028818..2030452 + 544 126454446 - BURPS1106A_2045 - phenylalanine/histidine ammonia-lyase family protein 2026 63.20 0 2030542..2031003 + 153 126452674 - BURPS1106A_2046 - Is2000 transposase 2027 63.79 0 2031124..2031297 + 57 126451554 - BURPS1106A_2047 - hypothetical protein 2028 64.67 0 2031294..2032394 + 366 126454873 - BURPS1106A_2048 - outer membrane porin 2029 64.78 0 2032464..2032622 - 52 126453729 - BURPS1106A_2049 - hypothetical protein 2030 65.97 0 2033134..2033277 - 47 126453259 - BURPS1106A_2050 - transposase IS911 2031 57.51 -1 2033402..2034439 - 345 126452099 - BURPS1106A_2051 - hypothetical protein 2032 54.39 -2 2034225..2034338 + 37 126451468 - BURPS1106A_2052 - hypothetical protein 2033 51.82 -2 2036663..2037376 - 237 126454435 - BURPS1106A_2053 - DNA-binding response regulator 2034 56.17 -2 2037734..2037895 + 53 126452014 - BURPS1106A_2054 - hypothetical protein 2035 62.12 -1 2038246..2038377 + 43 126454986 - BURPS1106A_2055 - hypothetical protein 2036 61.07 -1 2038389..2039156 - 255 126453354 cysC BURPS1106A_2056 - adenylylsulfate kinase 2037 64.45 0 2039270..2040895 - 541 126451445 - BURPS1106A_2057 - hypothetical protein 2038 64.49 0 2040937..2045301 - 1454 126451956 - BURPS1106A_2058 - TPR repeat-containing protein 2039 64.11 0 2045412..2046821 - 469 126455129 - BURPS1106A_2059 - HlyD family secretion protein 2040 64.27 0 2046818..2049109 - 763 126454806 - BURPS1106A_2060 - ABC transporter, permease/ATP-binding protein 2041 61.76 -1 2049144..2050019 - 291 126453840 - BURPS1106A_2061 - sulfotransferase domain-containing protein 2042 61.81 -1 2050016..2050489 - 157 126451584 - BURPS1106A_2062 - hypothetical protein 2043 65.28 0 2050621..2060235 - 3204 126454728 - BURPS1106A_2063 - type I secretion target repeat-containing protein 2044 64.09 0 2060421..2062166 - 581 126454365 - BURPS1106A_2064 - outer membrane efflux protein 2045 60.39 -1 2062349..2063113 - 254 126452529 - BURPS1106A_2065 - ompA family protein 2046 52.48 -2 2064267..2064407 - 46 126452217 - BURPS1106A_2066 - transposase 2047 62.32 0 2064843..2065049 + 68 126453387 - BURPS1106A_2067 - ISAfe7, transposase OrfA 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0