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Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1879 71.10 0 1852431..1853174 + 247 126451643 - BURPS1106A_1899 - His/Glu/Gln/Arg/opine amino acid ABC transporter permease 1880 74.36 +1 1853216..1854631 - 471 126451678 - BURPS1106A_1900 - M24/M37 family peptidase 1881 56.30 -2 1854773..1854907 + 44 126454315 - BURPS1106A_1901 - hypothetical protein 1882 70.39 0 1854973..1855644 - 223 126453336 amrR BURPS1106A_1902 - multidrug efflux operon transciptional regulator AmrR 1883 73.83 +1 1855788..1856987 + 399 126451999 amrA BURPS1106A_1903 - periplasmic multidrug efflux lipoprotein precursor 1884 68.87 0 1857004..1860135 + 1043 126454286 amrB BURPS1106A_1904 - multidrug efflux protein 1885 74.40 +1 1860132..1861682 + 516 126455205 oprA BURPS1106A_1905 - outer membrane efflux protein OprA 1886 74.21 +1 1862046..1862204 - 52 126452400 - BURPS1106A_1906 - hypothetical protein 1887 52.63 -2 1862847..1863188 + 113 126455062 - BURPS1106A_1907 - hypothetical protein 1888 45.19 -2 1863385..1863519 + 44 126453759 - BURPS1106A_1908 - hypothetical protein 1889 67.25 0 1863636..1864148 + 170 126453258 - BURPS1106A_1909 - fimbrial protein 1890 69.90 0 1864298..1866739 + 813 126452598 - BURPS1106A_1910 - fimbrial usher protein 1891 70.53 0 1866918..1867667 + 249 126451496 yfcS BURPS1106A_1911 - fimbrial chaperone yfcS precursor 1892 66.95 0 1867631..1868689 + 352 126452062 - BURPS1106A_1912 - hypothetical protein 1893 71.21 0 1868740..1870500 - 586 126455442 - BURPS1106A_1913 - ABC transporter, ATP-binding protein 1894 74.42 +1 1870497..1870625 - 42 126453125 - BURPS1106A_1914 - hypothetical protein 1895 70.79 0 1870634..1872235 - 533 126452006 - BURPS1106A_1915 - asparagine synthase 1896 66.53 0 1872312..1873022 - 236 126451596 - BURPS1106A_1916 - hypothetical protein 1897 59.03 -1 1873075..1873218 - 47 126454805 - BURPS1106A_1917 - hypothetical protein 1898 67.96 0 1873458..1873766 - 102 126454345 - BURPS1106A_1918 - hypothetical protein 1899 68.18 0 1873815..1874804 + 329 126452445 - BURPS1106A_1919 - AraC family transcriptional regulator 1900 68.35 0 1874906..1875853 + 315 126453551 - BURPS1106A_1920 - carbohydrate ABC transporter periplasmic sugar-binding protein 1901 70.15 0 1875847..1877454 + 535 126453379 - BURPS1106A_1921 - carbohydrate ABC transporter ATP-binding protein 1902 72.16 0 1877447..1878466 + 339 126451811 - BURPS1106A_1922 - carbohydrate ABC transporter permease 1903 76.19 +1 1878463..1878672 + 69 126454701 - BURPS1106A_1923 - hypothetical protein 1904 69.05 0 1878669..1879760 + 363 126452815 - BURPS1106A_1924 - zinc-binding dehydrogenase family oxidoreductase 1905 72.63 0 1879791..1881332 + 513 126452954 - BURPS1106A_1925 - carbohydrate kinase 1906 73.23 +1 1881329..1882075 + 248 126454530 - BURPS1106A_1926 - short chain dehydrogenase 1907 83.33 +2 1882156..1882287 + 43 126451883 - BURPS1106A_1927 - hypothetical protein 1908 74.60 +1 1882284..1882409 + 41 126453981 - BURPS1106A_1929 - hypothetical protein 1909 77.78 +1 1882370..1882612 - 80 126453115 - BURPS1106A_1928 - hypothetical protein 1910 70.00 0 1882681..1883100 + 139 126455334 - BURPS1106A_1930 - hypothetical protein 1911 72.13 0 1883135..1883848 + 237 126452200 - BURPS1106A_1931 - extracytoplasmic-function sigma-70 factor PvdS 1912 73.25 +1 1883904..1884146 + 80 126453623 - BURPS1106A_1932 - mbtH domain-containing protein 1913 71.16 0 1884220..1885221 + 333 126454451 - BURPS1106A_1933 - putative syringomycin biosynthesis enzyme 1914 73.96 +1 1885259..1886149 + 296 126453693 - BURPS1106A_1934 - iron chelate ABC transporter ATP-binding protein 1915 78.12 +1 1886146..1888266 + 706 126454568 - BURPS1106A_1935 - iron-hydroxamate transporter permease subunit 1916 72.24 0 1888263..1889069 + 268 126455113 - BURPS1106A_1936 - ferric iron reductase protein 1917 75.27 +1 1889066..1890262 + 398 126453996 - BURPS1106A_1937 - iron compound ABC transporter, periplasmic iron-compound-binding protein 1918 69.97 0 1890440..1891015 - 191 126453284 - BURPS1106A_1938 - hypothetical protein 1919 78.89 +2 1891224..1891403 + 59 126452245 - BURPS1106A_1939 - hypothetical protein 1920 70.34 0 1891503..1893191 - 562 126453656 - BURPS1106A_1940 - cyclic peptide ABC transporter, ATP-binding protein MbaE 1921 69.44 0 1893574..1893753 - 59 126452537 - BURPS1106A_1941 - hypothetical protein 1922 75.80 +1 1893832..1903704 + 3290 126452413 - BURPS1106A_1942 - putative siderophore non-ribosomal peptide synthetase MbaJ 1923 75.76 +1 1903753..1908951 + 1732 126455324 - BURPS1106A_1943 - putative siderophore non-ribosomal peptide synthetase MbaI 1924 70.78 0 1908993..1910501 + 502 126453761 - BURPS1106A_1944 - putative L-ornithine 5-monooxygenase MbaA 1925 67.99 0 1910501..1912762 + 753 126452615 fmtA BURPS1106A_1945 - ferric malleobactin transporter 1926 68.57 0 1912827..1913666 + 279 126454608 - BURPS1106A_1946 - hypothetical protein 1927 78.91 +2 1913663..1913956 + 97 126452199 - BURPS1106A_1947 - hypothetical protein 1928 74.42 +1 1913973..1915571 - 532 126452925 cobB BURPS1106A_1948 - cobyrinic acid a,c-diamide synthase 1929 67.16 0 1915576..1916178 - 200 126453726 - BURPS1106A_1949 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1930 77.78 +1 1916237..1916677 - 146 126453668 - BURPS1106A_1950 - cobalamin biosynthesis protein CbiG 1931 73.54 +1 1917555..1917743 - 62 126454723 - BURPS1106A_1951 - hypothetical protein 1932 66.10 0 1917780..1918841 + 353 126451877 hoxN BURPS1106A_1952 - high-affinity nickel transport protein 1933 70.48 0 1918963..1920036 + 357 126451969 cobW BURPS1106A_1953 - cobalamin biosynthesis protein CobW 1934 72.59 0 1920103..1923948 + 1281 126453959 cobN BURPS1106A_1954 - cobaltochelatase 1935 76.71 +1 1923945..1924442 + 165 126455143 - BURPS1106A_1955 - hypothetical protein 1936 74.96 +1 1924471..1925808 + 445 126454970 - BURPS1106A_1956 - magnesium chelatase, subunit ChII 1937 77.89 +1 1925889..1926503 + 204 126454843 - BURPS1106A_1957 - protoporphyrin IX magnesium chelatase 1938 69.29 0 1926843..1927529 + 228 126451815 - BURPS1106A_1958 - phospholipase/carboxylesterase 1939 74.44 +1 1927607..1927876 - 89 126452886 - BURPS1106A_1959 - hypothetical protein 1940 68.20 0 1927873..1928199 - 108 126453025 - BURPS1106A_1960 - hypothetical protein 1941 76.34 +1 1928196..1928381 - 61 126454899 - BURPS1106A_1961 - hypothetical protein 1942 69.48 0 1928562..1929911 - 449 126455294 - BURPS1106A_1962 - glycosy hydrolase family protein 1943 58.16 -1 1929910..1930050 + 46 126452122 - BURPS1106A_1963 - hypothetical protein 1944 76.50 +1 1930268..1932097 - 609 126453452 cbiG/cobJ BURPS1106A_1964 - cobalamin biosynthesis protein CbiG/precorrin-3B C17-methyltransferase 1945 69.52 0 1932094..1932828 - 244 126454586 cobI BURPS1106A_1965 - precorrin-2 C(20)-methyltransferase 1946 74.00 +1 1932825..1933451 - 208 126454699 cobH BURPS1106A_1966 - precorrin-8X methylmutase 1947 77.23 +1 1933444..1934892 - 482 126451806 cobG BURPS1106A_1967 - precorrin-3B synthase 1948 70.44 0 1935116..1935274 - 52 126452233 - BURPS1106A_1968 - hypothetical protein 1949 77.10 +1 1935290..1936516 + 408 126453534 cobL BURPS1106A_1969 - precorrin-6Y C5,15-methyltransferase (decarboxylating) 1950 73.33 +1 1936513..1937607 + 364 126455155 cbiD BURPS1106A_1970 - cobalt-precorrin-6A synthase 1951 78.37 +2 1937604..1938338 + 244 126452294 cobK BURPS1106A_1971 - cobalt-precorrin-6x reductase 1952 71.21 0 1938677..1939402 + 241 126452848 cobM BURPS1106A_1972 - precorrin-4 C11-methyltransferase 1953 70.37 0 1939481..1941046 - 521 126453950 - BURPS1106A_1973 - putative lipoprotein 1954 75.70 +1 1941176..1942360 - 394 126451808 - BURPS1106A_1974 - major facilitator family transporter 1955 72.12 0 1942484..1942978 + 164 126452741 - BURPS1106A_1975 - MarR family transcriptional regulator 1956 76.87 +1 1943133..1943279 - 48 126453202 - BURPS1106A_1976 - hypothetical protein 1957 69.21 0 1943286..1944584 - 432 126452565 - BURPS1106A_1977 - putative transporter, periplasmic substrate-binding protein 1958 72.73 0 1944622..1944753 - 43 126453473 - BURPS1106A_1978 - MarR family transcriptional regulator 1959 71.72 0 1944726..1945160 - 144 126454615 - BURPS1106A_1979 - transcriptional regulator 1960 65.53 0 1945703..1946407 - 234 126452802 - BURPS1106A_1980 - putative glutathione S-transferase 1961 70.58 0 1946692..1947612 - 306 126454207 - BURPS1106A_1981 - LysR family transcriptional regulator 1962 74.22 +1 1947710..1948159 + 149 126455000 - BURPS1106A_1982 - hypothetical protein 1963 72.08 0 1948156..1948950 + 264 126452344 - BURPS1106A_1983 - short chain dehydrogenase 1964 78.97 +2 1949042..1949236 + 64 126452566 - BURPS1106A_1985 - hypothetical protein 1965 69.64 0 1949193..1950134 - 313 126452232 arcC BURPS1106A_1984 - carbamate kinase 1966 64.99 0 1950220..1951230 - 336 126454759 arcB BURPS1106A_1986 - ornithine carbamoyltransferase 1967 67.21 0 1951295..1952572 - 425 126453511 arcA BURPS1106A_1987 - arginine deiminase 1968 66.67 0 1952569..1954029 - 486 126453054 arcD BURPS1106A_1988 - arginine/ornithine antiporter 1969 66.44 0 1954012..1954461 + 149 126451754 - BURPS1106A_1989 - hypothetical protein 1970 50.30 -2 1954508..1954672 + 54 126454950 - BURPS1106A_1990 - hypothetical protein 1971 75.79 +1 1954791..1955327 - 178 126453764 - BURPS1106A_1991 - hypothetical protein 1972 73.75 +1 1955363..1956181 - 272 126453122 - BURPS1106A_1992 - amine ABC transporter, permease protein 1973 73.70 +1 1956178..1957116 - 312 126452251 - BURPS1106A_1993 - amine ABC transporter, ATP-binding protein 1974 75.76 +1 1957113..1958333 - 406 126455455 - BURPS1106A_1994 - amine ABC transporter, permease protein 1975 67.94 0 1958330..1959268 - 312 126452444 - BURPS1106A_1995 - amine ABC transporter, periplasmic amine-binding protein 1976 62.50 0 1959514..1959633 + 39 126455175 - BURPS1106A_1996 - hypothetical protein 1977 69.91 0 1959630..1960400 + 256 126452860 - BURPS1106A_1997 - putative methyltransferase UbiE 1978 74.79 +1 1960757..1962160 - 467 126454631 - BURPS1106A_1998 - major facilitator family transporter 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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