version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1818 68.15 0 1796528..1797337 + 269 126451586 ssuC BURPS1106A_1837 - aliphatic sulfonates ABC transporter, permease protein 1819 74.31 +1 1797334..1798341 + 335 126452550 ssuB BURPS1106A_1838 - aliphatic sulfonates ABC transporter, ATP-binding protein 1820 63.43 0 1798338..1798646 + 102 126455149 - BURPS1106A_1839 - molybdenum-pterin binding protein 1821 60.10 -1 1798775..1798972 + 65 126452295 - BURPS1106A_1840 - hypothetical protein 1822 65.49 0 1799046..1799300 + 84 126455039 - BURPS1106A_1841 - hypothetical protein 1823 65.69 0 1800276..1801295 - 339 126452196 dusA BURPS1106A_1843 - tRNA-dihydrouridine synthase A 1824 73.46 +1 1801378..1801833 + 151 126452774 - BURPS1106A_1844 - hypothetical protein 1825 65.44 0 1801873..1803180 - 435 126453978 - BURPS1106A_1845 - dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein 1826 71.96 0 1803405..1803971 + 188 126453027 - BURPS1106A_1846 - hypothetical protein 1827 66.88 0 1804361..1804837 - 158 126454393 - BURPS1106A_1847 - putative transcriptional regulator 1828 66.44 0 1805019..1805456 + 145 126455018 - BURPS1106A_1848 - thioesterase family protein 1829 66.76 0 1805743..1806795 + 350 126452140 - BURPS1106A_1849 - aldo/keto reductase family oxidoreductase 1830 71.47 0 1807151..1808212 + 353 126453257 - BURPS1106A_1850 - putative permease 1831 66.67 0 1808377..1808526 + 49 126454325 - BURPS1106A_1851 - hypothetical protein 1832 67.14 0 1808523..1808945 + 140 126454944 - BURPS1106A_1852 - hypothetical protein 1833 78.03 +1 1808942..1809073 + 43 126454077 - BURPS1106A_1854 - hypothetical protein 1834 65.95 0 1809051..1809887 - 278 126451561 - BURPS1106A_1853 - nodulation ABC transporter NodJ 1835 66.01 0 1809892..1810806 - 304 126453723 nodI BURPS1106A_1855 - lipooligosaccharide transporter ATP-binding subunit 1836 63.62 0 1811036..1811527 + 163 126452151 - BURPS1106A_1856 - universal stress family protein 1837 68.57 0 1811938..1812672 - 244 126452784 - BURPS1106A_1857 - hypothetical protein 1838 67.58 0 1812706..1813032 - 108 126454117 - BURPS1106A_1858 - hypothetical protein 1839 68.83 0 1813095..1813742 - 215 126454981 lexA BURPS1106A_1859 - LexA repressor 1840 49.43 -2 1813746..1813919 + 57 126452296 - BURPS1106A_1860 - hypothetical protein 1841 66.96 0 1814045..1815082 + 345 126451687 - BURPS1106A_1861 - sulfate/thiosulfate ABC transporter, periplasmic sulfate-binding protein 1842 69.24 0 1815215..1816108 + 297 126452543 cysT BURPS1106A_1862 - sulfate/thiosulfate ABC transporter, permease protein CysT 1843 70.24 0 1816105..1817139 + 344 126453834 cysW BURPS1106A_1863 - sulfate/thiosulfate ABC transporter, permease protein CysW 1844 72.44 0 1817153..1818208 + 351 126454799 cysA BURPS1106A_1864 - sulfate/thiosulfate ABC transporter, ATP-binding protein 1845 65.70 0 1818278..1819204 + 308 126452001 - BURPS1106A_1865 - transcriptional regulator CysB-like protein 1846 65.52 0 1819395..1820525 + 376 126453843 - BURPS1106A_1866 - putative ribose ABC transporter, periplasmic ribose-binding protein 1847 67.52 0 1820583..1820699 - 38 126452724 - BURPS1106A_1867 - hypothetical protein 1848 73.79 +1 1820665..1822236 + 523 126455157 - BURPS1106A_1868 - putative ribose ABC transporter, ATP-binding protein 1849 69.92 0 1822307..1823320 + 337 126454007 - BURPS1106A_1869 - putative ribose ABC transporter, permease protein 1850 70.16 0 1823350..1824381 + 343 126454096 rbsR BURPS1106A_1870 - ribose operon repressor RbsR 1851 77.64 +1 1824378..1825352 + 324 126453421 rbsK BURPS1106A_1871 - ribokinase 1852 71.35 0 1825565..1827445 + 626 126451531 - BURPS1106A_1872 - methyl-accepting chemotaxis protein 1853 61.05 -1 1828296..1830218 + 640 126454647 prkA BURPS1106A_1873 - serine protein kinase 1854 63.51 0 1830342..1831607 + 421 126452511 - BURPS1106A_1874 - hypothetical protein 1855 63.46 0 1831607..1833289 + 560 126451642 - BURPS1106A_1875 - hypothetical protein 1856 75.26 +1 1833256..1833546 + 96 126451842 - BURPS1106A_1876 - hypothetical protein 1857 66.97 0 1833716..1835020 + 434 126451917 - BURPS1106A_1877 - alpha-ketoglutarate permease 1858 69.53 0 1835273..1836319 + 348 126452998 - BURPS1106A_1878 - ABC transporter substrate binding protein 1859 66.03 0 1836371..1836685 + 104 126452114 - BURPS1106A_1879 - hypothetical protein 1860 71.12 0 1836780..1837610 + 276 126455247 - BURPS1106A_1880 - ABC transporter, ATP-binding protein 1861 72.74 0 1837607..1838578 + 323 126454363 - BURPS1106A_1881 - ABC transporter, permease protein 1862 61.98 -1 1839135..1839326 + 63 126454658 - BURPS1106A_1882 - Flp/Fap pilin 1863 76.88 +1 1839352..1839870 + 172 126455283 - BURPS1106A_1883 - peptidase A24A, prepilin type IV 1864 76.92 +1 1839883..1840935 + 350 126452162 - BURPS1106A_1884 - putative pilus assembly protein CpaB 1865 70.95 0 1840970..1842418 + 482 126453026 - BURPS1106A_1885 - type II/III secretion system protein 1866 77.05 +1 1842452..1842865 + 137 126452011 - BURPS1106A_1886 - putative lipoprotein 1867 74.35 +1 1842876..1844111 + 411 126453450 - BURPS1106A_1887 - putative CpaE protein 1868 71.18 0 1844111..1845682 + 523 126452852 - BURPS1106A_1888 - type IV pilus assembly protein 1869 73.29 +1 1845679..1846674 + 331 126452248 - BURPS1106A_1889 - type II secretion system protein 1870 72.38 0 1846671..1847615 + 314 126454623 - BURPS1106A_1890 - type II secretion system protein 1871 75.15 +1 1847759..1848760 + 333 126454065 - BURPS1106A_1891 - TPR repeat-containing protein 1872 67.83 0 1848757..1849185 + 142 126452631 - BURPS1106A_1892 - TadE family protein 1873 73.35 +1 1849178..1850209 + 343 126453566 - BURPS1106A_1894 - TadE family protein 1874 76.39 +1 1850173..1850316 - 47 126454855 - BURPS1106A_1893 - hypothetical protein 1875 65.20 0 1850489..1851304 + 271 126454167 - BURPS1106A_1895 - putative amino acid ABC transporter, periplasmic amino acid-binding protein 1876 75.00 +1 1851349..1851468 + 39 126455214 - BURPS1106A_1896 - hypothetical protein 1877 71.73 0 1851465..1851701 + 78 126453791 - BURPS1106A_1897 - hypothetical protein 1878 71.07 0 1851703..1852428 + 241 126452880 - BURPS1106A_1898 - His/Glu/Gln/Arg/opine amino acid ABC transporter permease 1879 71.10 0 1852431..1853174 + 247 126451643 - BURPS1106A_1899 - His/Glu/Gln/Arg/opine amino acid ABC transporter permease 1880 74.36 +1 1853216..1854631 - 471 126451678 - BURPS1106A_1900 - M24/M37 family peptidase 1881 56.30 -2 1854773..1854907 + 44 126454315 - BURPS1106A_1901 - hypothetical protein 1882 70.39 0 1854973..1855644 - 223 126453336 amrR BURPS1106A_1902 - multidrug efflux operon transciptional regulator AmrR 1883 73.83 +1 1855788..1856987 + 399 126451999 amrA BURPS1106A_1903 - periplasmic multidrug efflux lipoprotein precursor 1884 68.87 0 1857004..1860135 + 1043 126454286 amrB BURPS1106A_1904 - multidrug efflux protein 1885 74.40 +1 1860132..1861682 + 516 126455205 oprA BURPS1106A_1905 - outer membrane efflux protein OprA 1886 74.21 +1 1862046..1862204 - 52 126452400 - BURPS1106A_1906 - hypothetical protein 1887 52.63 -2 1862847..1863188 + 113 126455062 - BURPS1106A_1907 - hypothetical protein 1888 45.19 -2 1863385..1863519 + 44 126453759 - BURPS1106A_1908 - hypothetical protein 1889 67.25 0 1863636..1864148 + 170 126453258 - BURPS1106A_1909 - fimbrial protein 1890 69.90 0 1864298..1866739 + 813 126452598 - BURPS1106A_1910 - fimbrial usher protein 1891 70.53 0 1866918..1867667 + 249 126451496 yfcS BURPS1106A_1911 - fimbrial chaperone yfcS precursor 1892 66.95 0 1867631..1868689 + 352 126452062 - BURPS1106A_1912 - hypothetical protein 1893 71.21 0 1868740..1870500 - 586 126455442 - BURPS1106A_1913 - ABC transporter, ATP-binding protein 1894 74.42 +1 1870497..1870625 - 42 126453125 - BURPS1106A_1914 - hypothetical protein 1895 70.79 0 1870634..1872235 - 533 126452006 - BURPS1106A_1915 - asparagine synthase 1896 66.53 0 1872312..1873022 - 236 126451596 - BURPS1106A_1916 - hypothetical protein 1897 59.03 -1 1873075..1873218 - 47 126454805 - BURPS1106A_1917 - hypothetical protein 1898 67.96 0 1873458..1873766 - 102 126454345 - BURPS1106A_1918 - hypothetical protein 1899 68.18 0 1873815..1874804 + 329 126452445 - BURPS1106A_1919 - AraC family transcriptional regulator 1900 68.35 0 1874906..1875853 + 315 126453551 - BURPS1106A_1920 - carbohydrate ABC transporter periplasmic sugar-binding protein 1901 70.15 0 1875847..1877454 + 535 126453379 - BURPS1106A_1921 - carbohydrate ABC transporter ATP-binding protein 1902 72.16 0 1877447..1878466 + 339 126451811 - BURPS1106A_1922 - carbohydrate ABC transporter permease 1903 76.19 +1 1878463..1878672 + 69 126454701 - BURPS1106A_1923 - hypothetical protein 1904 69.05 0 1878669..1879760 + 363 126452815 - BURPS1106A_1924 - zinc-binding dehydrogenase family oxidoreductase 1905 72.63 0 1879791..1881332 + 513 126452954 - BURPS1106A_1925 - carbohydrate kinase 1906 73.23 +1 1881329..1882075 + 248 126454530 - BURPS1106A_1926 - short chain dehydrogenase 1907 83.33 +2 1882156..1882287 + 43 126451883 - BURPS1106A_1927 - hypothetical protein 1908 74.60 +1 1882284..1882409 + 41 126453981 - BURPS1106A_1929 - hypothetical protein 1909 77.78 +1 1882370..1882612 - 80 126453115 - BURPS1106A_1928 - hypothetical protein 1910 70.00 0 1882681..1883100 + 139 126455334 - BURPS1106A_1930 - hypothetical protein 1911 72.13 0 1883135..1883848 + 237 126452200 - BURPS1106A_1931 - extracytoplasmic-function sigma-70 factor PvdS 1912 73.25 +1 1883904..1884146 + 80 126453623 - BURPS1106A_1932 - mbtH domain-containing protein 1913 71.16 0 1884220..1885221 + 333 126454451 - BURPS1106A_1933 - putative syringomycin biosynthesis enzyme 1914 73.96 +1 1885259..1886149 + 296 126453693 - BURPS1106A_1934 - iron chelate ABC transporter ATP-binding protein 1915 78.12 +1 1886146..1888266 + 706 126454568 - BURPS1106A_1935 - iron-hydroxamate transporter permease subunit 1916 72.24 0 1888263..1889069 + 268 126455113 - BURPS1106A_1936 - ferric iron reductase protein 1917 75.27 +1 1889066..1890262 + 398 126453996 - BURPS1106A_1937 - iron compound ABC transporter, periplasmic iron-compound-binding protein 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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