version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1782 68.63 0 1760356..1761069 + 237 126454683 - BURPS1106A_1798 - hypothetical protein 1783 70.97 0 1761220..1761870 - 216 126453854 - BURPS1106A_1799 - putative RNA chaperone Hfq 1784 67.73 0 1762166..1762447 + 93 126454387 - BURPS1106A_1800 - hypothetical protein 1785 69.35 0 1762462..1762647 + 61 126452476 - BURPS1106A_1802 - hypothetical protein 1786 66.37 0 1762635..1763633 - 332 126451524 - BURPS1106A_1801 - hypothetical protein 1787 65.99 0 1763654..1765426 - 590 126454267 fadD BURPS1106A_1803 - long-chain-fatty-acid--CoA ligase 1788 70.18 0 1765423..1765536 - 37 126455258 - BURPS1106A_1804 - hypothetical protein 1789 70.56 0 1765611..1766561 - 316 126452031 - BURPS1106A_1805 - TetR family transcriptional regulator 1790 66.83 0 1766778..1768004 - 408 126453926 - BURPS1106A_1806 - major facilitator superfamily transporter sialate:H(+) symporter 1791 73.02 +1 1768207..1768395 - 62 126454782 - BURPS1106A_1807 - hypothetical protein 1792 70.09 0 1768414..1768968 + 184 126451652 - BURPS1106A_1808 - acetyltransferase 1793 65.87 0 1769112..1769738 + 208 126452499 - BURPS1106A_1809 - hypothetical protein 1794 70.99 0 1769785..1771497 + 570 126451659 - BURPS1106A_1810 - sulfate permease family inorganic anion transporter 1795 71.83 0 1771965..1773551 - 528 126452487 - BURPS1106A_1811 - hypothetical protein 1796 68.01 0 1773787..1775274 - 495 126454875 - BURPS1106A_1812 - phosphoesterase family protein 1797 66.07 0 1775335..1777521 + 728 126451578 - BURPS1106A_1813 - methyl-accepting chemotaxis protein 1798 67.94 0 1778035..1780695 + 886 126452178 rnr BURPS1106A_1816 - ribonuclease R 1799 70.30 0 1780827..1781570 + 247 126453075 - BURPS1106A_1817 - RNA methyltransferase 1800 74.33 +1 1781582..1781881 + 99 126453961 - BURPS1106A_1818 - hypothetical protein 1801 70.67 0 1781944..1782843 + 299 126455255 - BURPS1106A_1819 - N-acetylmuramoyl-L-alanine amidase 1802 68.39 0 1783112..1783807 + 231 126454328 rpiA BURPS1106A_1820 - ribose-5-phosphate isomerase A 1803 64.57 0 1784145..1784858 + 237 126455218 - BURPS1106A_1821 - GntR family transcriptional regulator 1804 70.12 0 1784958..1785941 + 327 126451587 - BURPS1106A_1822 - oxidoreductase, NAD-binding 1805 67.88 0 1786343..1787002 - 219 126452898 - BURPS1106A_1823 - His/Glu/Gln/Arg/opine amino acid ABC transporter permease 1806 65.03 0 1787132..1787926 - 264 126455413 - BURPS1106A_1824 - amino acid ABC transporter, periplasmic amino acid-binding protein 1807 70.17 0 1788046..1789074 - 342 126453525 pyrD BURPS1106A_1825 - dihydroorotate dehydrogenase 2 1808 65.94 0 1789179..1790009 - 276 126452638 - BURPS1106A_1826 - arginyl-tRNA-protein transferase 1809 69.66 0 1790043..1790810 - 255 126451822 aat BURPS1106A_1827 - leucyl/phenylalanyl-tRNA--protein transferase 1810 65.75 0 1790819..1791364 - 181 126451825 - BURPS1106A_1828 - nudix hydrolase 1811 69.03 0 1791413..1791751 + 112 126454583 - BURPS1106A_1830 - hypothetical protein 1812 69.30 0 1792012..1792581 + 189 126453558 - BURPS1106A_1831 - hypothetical protein 1813 66.37 0 1792586..1792924 + 112 126453393 qacE BURPS1106A_1832 - quaternary ammonium compound-resistance protein QacE 1814 71.65 0 1792954..1794096 + 380 126454380 - BURPS1106A_1833 - enoyl-CoA hydratase 1815 66.23 0 1794208..1794435 - 75 126452439 - BURPS1106A_1834 - hypothetical protein 1816 68.23 0 1794553..1794999 - 148 126453846 - BURPS1106A_1835 - hypothetical protein 1817 69.78 0 1795353..1796510 + 385 126454735 msuD BURPS1106A_1836 - alkanesulfonate monooxygenase 1818 68.15 0 1796528..1797337 + 269 126451586 ssuC BURPS1106A_1837 - aliphatic sulfonates ABC transporter, permease protein 1819 74.31 +1 1797334..1798341 + 335 126452550 ssuB BURPS1106A_1838 - aliphatic sulfonates ABC transporter, ATP-binding protein 1820 63.43 0 1798338..1798646 + 102 126455149 - BURPS1106A_1839 - molybdenum-pterin binding protein 1821 60.10 -1 1798775..1798972 + 65 126452295 - BURPS1106A_1840 - hypothetical protein 1822 65.49 0 1799046..1799300 + 84 126455039 - BURPS1106A_1841 - hypothetical protein 1823 65.69 0 1800276..1801295 - 339 126452196 dusA BURPS1106A_1843 - tRNA-dihydrouridine synthase A 1824 73.46 +1 1801378..1801833 + 151 126452774 - BURPS1106A_1844 - hypothetical protein 1825 65.44 0 1801873..1803180 - 435 126453978 - BURPS1106A_1845 - dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein 1826 71.96 0 1803405..1803971 + 188 126453027 - BURPS1106A_1846 - hypothetical protein 1827 66.88 0 1804361..1804837 - 158 126454393 - BURPS1106A_1847 - putative transcriptional regulator 1828 66.44 0 1805019..1805456 + 145 126455018 - BURPS1106A_1848 - thioesterase family protein 1829 66.76 0 1805743..1806795 + 350 126452140 - BURPS1106A_1849 - aldo/keto reductase family oxidoreductase 1830 71.47 0 1807151..1808212 + 353 126453257 - BURPS1106A_1850 - putative permease 1831 66.67 0 1808377..1808526 + 49 126454325 - BURPS1106A_1851 - hypothetical protein 1832 67.14 0 1808523..1808945 + 140 126454944 - BURPS1106A_1852 - hypothetical protein 1833 78.03 +1 1808942..1809073 + 43 126454077 - BURPS1106A_1854 - hypothetical protein 1834 65.95 0 1809051..1809887 - 278 126451561 - BURPS1106A_1853 - nodulation ABC transporter NodJ 1835 66.01 0 1809892..1810806 - 304 126453723 nodI BURPS1106A_1855 - lipooligosaccharide transporter ATP-binding subunit 1836 63.62 0 1811036..1811527 + 163 126452151 - BURPS1106A_1856 - universal stress family protein 1837 68.57 0 1811938..1812672 - 244 126452784 - BURPS1106A_1857 - hypothetical protein 1838 67.58 0 1812706..1813032 - 108 126454117 - BURPS1106A_1858 - hypothetical protein 1839 68.83 0 1813095..1813742 - 215 126454981 lexA BURPS1106A_1859 - LexA repressor 1840 49.43 -2 1813746..1813919 + 57 126452296 - BURPS1106A_1860 - hypothetical protein 1841 66.96 0 1814045..1815082 + 345 126451687 - BURPS1106A_1861 - sulfate/thiosulfate ABC transporter, periplasmic sulfate-binding protein 1842 69.24 0 1815215..1816108 + 297 126452543 cysT BURPS1106A_1862 - sulfate/thiosulfate ABC transporter, permease protein CysT 1843 70.24 0 1816105..1817139 + 344 126453834 cysW BURPS1106A_1863 - sulfate/thiosulfate ABC transporter, permease protein CysW 1844 72.44 0 1817153..1818208 + 351 126454799 cysA BURPS1106A_1864 - sulfate/thiosulfate ABC transporter, ATP-binding protein 1845 65.70 0 1818278..1819204 + 308 126452001 - BURPS1106A_1865 - transcriptional regulator CysB-like protein 1846 65.52 0 1819395..1820525 + 376 126453843 - BURPS1106A_1866 - putative ribose ABC transporter, periplasmic ribose-binding protein 1847 67.52 0 1820583..1820699 - 38 126452724 - BURPS1106A_1867 - hypothetical protein 1848 73.79 +1 1820665..1822236 + 523 126455157 - BURPS1106A_1868 - putative ribose ABC transporter, ATP-binding protein 1849 69.92 0 1822307..1823320 + 337 126454007 - BURPS1106A_1869 - putative ribose ABC transporter, permease protein 1850 70.16 0 1823350..1824381 + 343 126454096 rbsR BURPS1106A_1870 - ribose operon repressor RbsR 1851 77.64 +1 1824378..1825352 + 324 126453421 rbsK BURPS1106A_1871 - ribokinase 1852 71.35 0 1825565..1827445 + 626 126451531 - BURPS1106A_1872 - methyl-accepting chemotaxis protein 1853 61.05 -1 1828296..1830218 + 640 126454647 prkA BURPS1106A_1873 - serine protein kinase 1854 63.51 0 1830342..1831607 + 421 126452511 - BURPS1106A_1874 - hypothetical protein 1855 63.46 0 1831607..1833289 + 560 126451642 - BURPS1106A_1875 - hypothetical protein 1856 75.26 +1 1833256..1833546 + 96 126451842 - BURPS1106A_1876 - hypothetical protein 1857 66.97 0 1833716..1835020 + 434 126451917 - BURPS1106A_1877 - alpha-ketoglutarate permease 1858 69.53 0 1835273..1836319 + 348 126452998 - BURPS1106A_1878 - ABC transporter substrate binding protein 1859 66.03 0 1836371..1836685 + 104 126452114 - BURPS1106A_1879 - hypothetical protein 1860 71.12 0 1836780..1837610 + 276 126455247 - BURPS1106A_1880 - ABC transporter, ATP-binding protein 1861 72.74 0 1837607..1838578 + 323 126454363 - BURPS1106A_1881 - ABC transporter, permease protein 1862 61.98 -1 1839135..1839326 + 63 126454658 - BURPS1106A_1882 - Flp/Fap pilin 1863 76.88 +1 1839352..1839870 + 172 126455283 - BURPS1106A_1883 - peptidase A24A, prepilin type IV 1864 76.92 +1 1839883..1840935 + 350 126452162 - BURPS1106A_1884 - putative pilus assembly protein CpaB 1865 70.95 0 1840970..1842418 + 482 126453026 - BURPS1106A_1885 - type II/III secretion system protein 1866 77.05 +1 1842452..1842865 + 137 126452011 - BURPS1106A_1886 - putative lipoprotein 1867 74.35 +1 1842876..1844111 + 411 126453450 - BURPS1106A_1887 - putative CpaE protein 1868 71.18 0 1844111..1845682 + 523 126452852 - BURPS1106A_1888 - type IV pilus assembly protein 1869 73.29 +1 1845679..1846674 + 331 126452248 - BURPS1106A_1889 - type II secretion system protein 1870 72.38 0 1846671..1847615 + 314 126454623 - BURPS1106A_1890 - type II secretion system protein 1871 75.15 +1 1847759..1848760 + 333 126454065 - BURPS1106A_1891 - TPR repeat-containing protein 1872 67.83 0 1848757..1849185 + 142 126452631 - BURPS1106A_1892 - TadE family protein 1873 73.35 +1 1849178..1850209 + 343 126453566 - BURPS1106A_1894 - TadE family protein 1874 76.39 +1 1850173..1850316 - 47 126454855 - BURPS1106A_1893 - hypothetical protein 1875 65.20 0 1850489..1851304 + 271 126454167 - BURPS1106A_1895 - putative amino acid ABC transporter, periplasmic amino acid-binding protein 1876 75.00 +1 1851349..1851468 + 39 126455214 - BURPS1106A_1896 - hypothetical protein 1877 71.73 0 1851465..1851701 + 78 126453791 - BURPS1106A_1897 - hypothetical protein 1878 71.07 0 1851703..1852428 + 241 126452880 - BURPS1106A_1898 - His/Glu/Gln/Arg/opine amino acid ABC transporter permease 1879 71.10 0 1852431..1853174 + 247 126451643 - BURPS1106A_1899 - His/Glu/Gln/Arg/opine amino acid ABC transporter permease 1880 74.36 +1 1853216..1854631 - 471 126451678 - BURPS1106A_1900 - M24/M37 family peptidase 1881 56.30 -2 1854773..1854907 + 44 126454315 - BURPS1106A_1901 - hypothetical protein 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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