version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1711 64.68 0 1683683..1684387 + 234 126452331 - BURPS1106A_1725 - 3-oxoacid CoA-transferase subunit A 1712 65.89 0 1684389..1685030 + 213 126453251 - BURPS1106A_1726 - 3-oxoacid CoA-transferase subunit B 1713 75.10 +1 1685431..1686153 - 240 126454594 - BURPS1106A_1727 - short chain dehydrogenase 1714 71.57 0 1686197..1687297 - 366 126451454 - BURPS1106A_1728 - polysaccharide deacetylase family protein 1715 73.30 +1 1687312..1687869 - 185 126452915 - BURPS1106A_1729 - hypothetical protein 1716 72.30 0 1688057..1688962 + 301 126453195 - BURPS1106A_1730 - LysR family transcriptional regulator 1717 69.12 0 1689848..1691194 + 448 126452037 - BURPS1106A_1731 - alpha/beta fold family hydrolase 1718 66.10 0 1691268..1691621 + 117 126455137 - BURPS1106A_1732 - putative endoribonuclease L-PSP 1719 68.68 0 1691666..1693903 + 745 126454760 relA BURPS1106A_1733 - GTP diphosphokinase 1720 62.11 -1 1694362..1696269 + 635 126453502 thrS BURPS1106A_1735 - threonyl-tRNA synthetase 1721 58.17 -1 1696373..1696843 + 156 126452447 infC BURPS1106A_1736 - translation initiation factor IF-3 1722 59.60 -1 1697036..1697233 + 65 126451610 rpmI BURPS1106A_1737 - 50S ribosomal protein L35 1723 60.56 -1 1697264..1697623 + 119 126455404 rplT BURPS1106A_1738 - 50S ribosomal protein L20 1724 63.73 0 1697763..1698785 + 340 161986643 pheS BURPS1106A_1739 - phenylalanyl-tRNA synthetase subunit alpha 1725 66.71 0 1698873..1701305 + 810 126453391 pheT BURPS1106A_1740 - phenylalanyl-tRNA synthetase subunit beta 1726 64.69 0 1701378..1701782 + 134 126454482 ihfA BURPS1106A_1741 - integration host factor subunit alpha 1727 66.91 0 1701841..1702245 + 134 126453766 - BURPS1106A_1742 - MerR family transcriptional regulator 1728 66.20 0 1702367..1704520 - 717 126455049 - BURPS1106A_1743 - putative lipoprotein 1729 56.71 -2 1704987..1706171 - 394 126454741 - BURPS1106A_1744 - acyltransferase 1730 66.25 0 1706883..1708079 - 398 126453205 - BURPS1106A_1746 - putative lipoprotein 1731 70.73 0 1708090..1708581 - 163 126452398 - BURPS1106A_1747 - hypothetical protein 1732 65.91 0 1708622..1708753 - 43 126451601 - BURPS1106A_1748 - hypothetical protein 1733 64.47 0 1708910..1710136 + 408 126455259 - BURPS1106A_1749 - putative lipoprotein 1734 63.23 0 1710698..1710988 + 96 126453815 - BURPS1106A_1750 - antibiotic biosynthesis monooxygenase family protein 1735 59.69 -1 1711038..1711295 - 85 126452918 - BURPS1106A_1751 - hypothetical protein 1736 60.57 -1 1711444..1711722 - 92 126453298 - BURPS1106A_1752 - hypothetical protein 1737 65.70 0 1711961..1712683 - 240 126452373 - BURPS1106A_1753 - hypothetical protein 1738 60.06 -1 1712884..1713201 + 105 126454882 - BURPS1106A_1754 - hypothetical protein 1739 68.60 0 1713360..1713617 - 85 126453697 - BURPS1106A_1755 - hypothetical protein 1740 68.92 0 1713823..1714221 - 132 126454104 - BURPS1106A_1756 - hypothetical protein 1741 70.54 0 1714643..1715545 + 300 126451925 - BURPS1106A_1757 - LysR family transcriptional regulator 1742 70.68 0 1715964..1717334 + 456 126452356 scpB BURPS1106A_1758 - segregation and condensation protein B 1743 73.45 +1 1717398..1719062 + 554 126455204 - BURPS1106A_1759 - RNA pseudouridine synthase family protein 1744 60.82 -1 1719367..1719828 + 153 126452322 - BURPS1106A_1760 - hypothetical protein 1745 64.91 0 1719825..1721300 + 491 126455004 nusA BURPS1106A_1761 - transcription elongation factor NusA 1746 68.07 0 1721392..1724319 + 975 126455003 infB BURPS1106A_1762 - translation initiation factor IF-2 1747 60.19 -1 1724377..1724793 + 138 126454142 rbfA BURPS1106A_1763 - ribosome-binding factor A 1748 71.18 0 1724847..1725755 + 302 126454073 truB BURPS1106A_1764 - tRNA pseudouridine synthase B 1749 61.67 -1 1725839..1725958 + 39 126453414 - BURPS1106A_1765 - hypothetical protein 1750 67.18 0 1726025..1727584 - 519 126451616 - BURPS1106A_1766 - EmrB/QacA family drug resistance transporter 1751 68.04 0 1727607..1728842 - 411 126454488 - BURPS1106A_1767 - multidrug resistance protein 1752 70.24 0 1728910..1730391 - 493 126452748 - BURPS1106A_1768 - NodT family efflux transporter outer membrane lipoprotein 1753 66.27 0 1730506..1731003 - 165 126451868 - BURPS1106A_1769 - MarR family transcriptional regulator 1754 58.33 -1 1731203..1731334 - 43 126454404 - BURPS1106A_1770 - hypothetical protein 1755 66.94 0 1731296..1733122 + 608 126453085 typA BURPS1106A_1771 - GTP-binding protein TypA 1756 64.29 0 1733461..1736325 + 954 126453274 kgd BURPS1106A_1772 - alpha-ketoglutarate decarboxylase 1757 68.09 0 1736460..1737725 + 421 126452386 sucB BURPS1106A_1773 - dihydrolipoamide acetyltransferase 1758 65.62 0 1737825..1739255 + 476 126455059 lpdA BURPS1106A_1774 - dihydrolipoamide dehydrogenase 1759 65.21 0 1739359..1740459 + 366 126454108 - BURPS1106A_1775 - AFG1 family ATPase 1760 55.71 -2 1740464..1740682 + 72 126455170 - BURPS1106A_1776 - hypothetical protein 1761 68.61 0 1740654..1741064 + 136 126453987 - BURPS1106A_1777 - hypothetical protein 1762 65.89 0 1741096..1741224 + 42 126453372 - BURPS1106A_1778 - hypothetical protein 1763 63.64 0 1741301..1741762 - 153 126454690 - BURPS1106A_1779 - putative lipoprotein 1764 66.67 0 1741785..1742009 + 74 126453512 - BURPS1106A_1781 - hypothetical protein 1765 66.61 0 1742003..1743658 - 551 126454681 - BURPS1106A_1780 - hypothetical protein 1766 74.33 +1 1743833..1745098 - 421 126453362 - BURPS1106A_1782 - putative lipoprotein 1767 74.59 +1 1745148..1746749 - 533 126453964 - BURPS1106A_1783 - hypothetical protein 1768 59.22 -1 1746682..1746963 + 93 126452281 - BURPS1106A_1784 - hypothetical protein 1769 59.60 -1 1747387..1747584 + 65 126452952 - BURPS1106A_1785 - pilin family protein 1770 66.27 0 1747667..1748167 + 166 126454569 - BURPS1106A_1786 - peptidase A24A, prepilin type IV 1771 67.09 0 1748164..1748631 + 155 126455238 - BURPS1106A_1787 - TadE family protein 1772 74.44 +1 1748711..1749610 + 299 126451660 - BURPS1106A_1788 - putative pilus assembly protein CpaB 1773 70.52 0 1749701..1750999 + 432 126452556 - BURPS1106A_1789 - type II/III secretion system protein 1774 72.48 0 1751066..1752304 + 412 126453930 - BURPS1106A_1790 - hypothetical protein 1775 67.63 0 1752308..1753651 + 447 126455026 - BURPS1106A_1791 - type II/IV secretion system protein 1776 72.92 0 1753644..1754651 + 335 126453046 - BURPS1106A_1792 - type II secretion system protein 1777 73.19 +1 1754657..1755667 + 336 126452133 - BURPS1106A_1793 - type II secretion system protein 1778 74.04 +1 1755704..1756639 + 311 126453745 - BURPS1106A_1794 - TPR domain-containing protein 1779 75.59 +1 1756661..1757041 + 126 126453038 - BURPS1106A_1795 - hypothetical protein 1780 71.09 0 1757049..1758857 + 602 126451635 - BURPS1106A_1796 - hypothetical protein 1781 66.81 0 1758874..1760265 + 463 126454635 - BURPS1106A_1797 - sigma-54 interaction domain/Fis family transcriptional regulator domain-containing protein 1782 68.63 0 1760356..1761069 + 237 126454683 - BURPS1106A_1798 - hypothetical protein 1783 70.97 0 1761220..1761870 - 216 126453854 - BURPS1106A_1799 - putative RNA chaperone Hfq 1784 67.73 0 1762166..1762447 + 93 126454387 - BURPS1106A_1800 - hypothetical protein 1785 69.35 0 1762462..1762647 + 61 126452476 - BURPS1106A_1802 - hypothetical protein 1786 66.37 0 1762635..1763633 - 332 126451524 - BURPS1106A_1801 - hypothetical protein 1787 65.99 0 1763654..1765426 - 590 126454267 fadD BURPS1106A_1803 - long-chain-fatty-acid--CoA ligase 1788 70.18 0 1765423..1765536 - 37 126455258 - BURPS1106A_1804 - hypothetical protein 1789 70.56 0 1765611..1766561 - 316 126452031 - BURPS1106A_1805 - TetR family transcriptional regulator 1790 66.83 0 1766778..1768004 - 408 126453926 - BURPS1106A_1806 - major facilitator superfamily transporter sialate:H(+) symporter 1791 73.02 +1 1768207..1768395 - 62 126454782 - BURPS1106A_1807 - hypothetical protein 1792 70.09 0 1768414..1768968 + 184 126451652 - BURPS1106A_1808 - acetyltransferase 1793 65.87 0 1769112..1769738 + 208 126452499 - BURPS1106A_1809 - hypothetical protein 1794 70.99 0 1769785..1771497 + 570 126451659 - BURPS1106A_1810 - sulfate permease family inorganic anion transporter 1795 71.83 0 1771965..1773551 - 528 126452487 - BURPS1106A_1811 - hypothetical protein 1796 68.01 0 1773787..1775274 - 495 126454875 - BURPS1106A_1812 - phosphoesterase family protein 1797 66.07 0 1775335..1777521 + 728 126451578 - BURPS1106A_1813 - methyl-accepting chemotaxis protein 1798 67.94 0 1778035..1780695 + 886 126452178 rnr BURPS1106A_1816 - ribonuclease R 1799 70.30 0 1780827..1781570 + 247 126453075 - BURPS1106A_1817 - RNA methyltransferase 1800 74.33 +1 1781582..1781881 + 99 126453961 - BURPS1106A_1818 - hypothetical protein 1801 70.67 0 1781944..1782843 + 299 126455255 - BURPS1106A_1819 - N-acetylmuramoyl-L-alanine amidase 1802 68.39 0 1783112..1783807 + 231 126454328 rpiA BURPS1106A_1820 - ribose-5-phosphate isomerase A 1803 64.57 0 1784145..1784858 + 237 126455218 - BURPS1106A_1821 - GntR family transcriptional regulator 1804 70.12 0 1784958..1785941 + 327 126451587 - BURPS1106A_1822 - oxidoreductase, NAD-binding 1805 67.88 0 1786343..1787002 - 219 126452898 - BURPS1106A_1823 - His/Glu/Gln/Arg/opine amino acid ABC transporter permease 1806 65.03 0 1787132..1787926 - 264 126455413 - BURPS1106A_1824 - amino acid ABC transporter, periplasmic amino acid-binding protein 1807 70.17 0 1788046..1789074 - 342 126453525 pyrD BURPS1106A_1825 - dihydroorotate dehydrogenase 2 1808 65.94 0 1789179..1790009 - 276 126452638 - BURPS1106A_1826 - arginyl-tRNA-protein transferase 1809 69.66 0 1790043..1790810 - 255 126451822 aat BURPS1106A_1827 - leucyl/phenylalanyl-tRNA--protein transferase 1810 65.75 0 1790819..1791364 - 181 126451825 - BURPS1106A_1828 - nudix hydrolase 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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