version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1628 66.54 0 1594446..1596065 - 539 126452845 - BURPS1106A_1642 - drug:H+ antiporter-2 (DHA2) family protein 1629 70.90 0 1596062..1596250 - 62 126452822 - BURPS1106A_1643 - hypothetical protein 1630 71.04 0 1596247..1597434 - 395 126454055 - BURPS1106A_1644 - HlyD family secretion protein 1631 71.11 0 1597555..1597689 + 44 126452212 - BURPS1106A_1646 - hypothetical protein 1632 75.08 +1 1597674..1597994 - 106 126455101 - BURPS1106A_1645 - hypothetical protein 1633 69.01 0 1598058..1599251 - 397 126453995 - BURPS1106A_1647 - trans-2-enoyl-CoA reductase 1634 67.80 0 1599449..1601032 - 527 126455094 acpA BURPS1106A_1648 - acid phosphatase 1635 71.54 0 1601266..1602681 + 471 126452479 - BURPS1106A_1649 - di-haem cytochrome c peroxidase 1636 65.85 0 1602725..1603585 - 286 126453974 - BURPS1106A_1650 - hypothetical protein 1637 70.05 0 1603687..1605786 + 699 126452022 - BURPS1106A_1651 - glycosy hydrolase family protein 1638 66.93 0 1606074..1606460 + 128 126451755 - BURPS1106A_1652 - hypothetical protein 1639 72.46 0 1606479..1606961 + 160 126452868 - BURPS1106A_1653 - NUDIX family hydrolase 1640 74.07 +1 1607078..1607212 + 44 126453546 - BURPS1106A_1654 - hypothetical protein 1641 64.91 0 1607305..1609014 - 569 126451537 glnS BURPS1106A_1655 - glutaminyl-tRNA synthetase 1642 72.50 0 1609264..1609503 + 79 126452646 - BURPS1106A_1656 - hypothetical protein 1643 70.83 0 1609635..1609802 - 55 126454246 - BURPS1106A_1657 - hypothetical protein 1644 71.17 0 1609832..1611052 - 406 126455081 - BURPS1106A_1658 - CAIB/BAIF family protein 1645 75.00 +1 1611154..1611285 - 43 126451668 - BURPS1106A_1659 - hypothetical protein 1646 68.34 0 1611604..1614228 + 874 126451905 alaS BURPS1106A_1660 - alanyl-tRNA synthetase 1647 72.51 0 1614760..1615785 - 341 126454011 - BURPS1106A_1661 - LysR family transcriptional regulator 1648 73.07 +1 1615872..1617512 + 546 126455159 - BURPS1106A_1662 - major facilitator superfamily permease 1649 72.06 0 1617844..1619400 + 518 126455207 - BURPS1106A_1664 - peptidase s1, chymotrypsin:pdz/dhr/glgf 1650 77.40 +1 1619355..1619531 - 58 126454044 - BURPS1106A_1663 - hypothetical protein 1651 63.86 0 1619619..1620296 - 225 126451611 - BURPS1106A_1665 - hypothetical protein 1652 69.75 0 1620588..1621139 + 183 126453396 - BURPS1106A_1666 - MutT/NUDIX NTP pyrophosphatase 1653 68.45 0 1621239..1621574 - 111 126453939 - BURPS1106A_1667 - hypothetical protein 1654 71.80 0 1621791..1622939 + 382 126454540 - BURPS1106A_1668 - NAD-dependent 4-hydroxybutyrate dehydrogenase 1655 72.75 0 1622936..1623280 + 114 126453157 - BURPS1106A_1669 - hypothetical protein 1656 70.67 0 1623181..1623630 + 149 126452120 - BURPS1106A_1670 - thioesterase family protein 1657 72.76 0 1623635..1624570 + 311 126452113 - BURPS1106A_1671 - branched chain amino acid ABC transporter permease 1658 74.21 +1 1624599..1626839 + 746 126454727 - BURPS1106A_1672 - ABC-transporter 1659 74.89 +1 1626836..1627540 + 234 126453532 - BURPS1106A_1673 - ABC transporter, ATP-binding protein 1660 70.15 0 1627657..1628460 - 267 126452492 iolB BURPS1106A_1674 - myo-inositol catabolism protein IolB 1661 70.36 0 1628460..1629380 - 306 126454709 - BURPS1106A_1675 - AP endonuclease 1662 73.52 +1 1629377..1631317 - 646 126453463 iolD BURPS1106A_1676 - iolD protein 1663 71.96 0 1631373..1633373 - 666 126452179 iolC BURPS1106A_1677 - iolC protein 1664 65.29 0 1633387..1634187 - 266 126451775 - BURPS1106A_1678 - carbohydrate ABC transporter ATP-binding protein 1665 68.24 0 1634200..1635345 - 381 126455364 - BURPS1106A_1679 - carbohydrate ABC transporter permease 1666 65.41 0 1635446..1636558 - 370 126453990 - BURPS1106A_1680 - carbohydrate ABC transporter periplasmic sugar-binding protein 1667 67.23 0 1636740..1637621 + 293 126451672 - BURPS1106A_1681 - RpiR family transcriptional regulator 1668 71.67 0 1637614..1638633 + 339 126452718 - BURPS1106A_1682 - putative inositol 2-dehydrogenase 1669 72.83 0 1638646..1639683 + 345 126454442 - BURPS1106A_1683 - oxidoreductase family protein 1670 62.77 0 1639848..1640078 + 76 126454544 - BURPS1106A_1684 - hypothetical protein 1671 70.54 0 1640354..1640740 + 128 126452323 - BURPS1106A_1685 - hypothetical protein 1672 63.65 0 1641044..1641772 + 242 126453297 - BURPS1106A_1686 - DNA-binding response regulator 1673 70.62 0 1641769..1643133 + 454 126452942 - BURPS1106A_1687 - lysM domain-containing protein 1674 69.26 0 1643144..1645537 + 797 126453533 - BURPS1106A_1688 - sensor histidine kinase 1675 73.14 +1 1645626..1646243 + 205 126453979 - BURPS1106A_1689 - putative lipoprotein 1676 63.83 0 1646304..1647185 - 293 126451502 galU BURPS1106A_1690 - UTP-glucose-1-phosphate uridylyltransferase 1677 66.25 0 1647272..1650139 - 955 126452676 valS BURPS1106A_1691 - valyl-tRNA synthetase 1678 69.12 0 1650279..1652642 + 787 126453724 uvrD BURPS1106A_1692 - DNA helicase II 1679 71.74 0 1652639..1653427 + 262 126454861 mtnN BURPS1106A_1693 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1680 67.30 0 1653764..1655017 - 417 126455407 fsr BURPS1106A_1694 - fosmidomycin resistance protein 1681 69.65 0 1655102..1657045 + 647 126453706 - BURPS1106A_1696 - methyl-accepting chemotaxis protein 1682 73.54 +1 1657018..1657308 - 96 126452593 - BURPS1106A_1695 - hypothetical protein 1683 68.03 0 1657396..1658277 - 293 126454942 - BURPS1106A_1697 - putative fusaric acid resistance protein 1684 64.22 0 1658291..1658494 - 67 126454915 - BURPS1106A_1698 - hypothetical protein 1685 71.03 0 1658491..1660692 - 733 126452079 - BURPS1106A_1699 - putative fusaric acid resistance protein 1686 73.61 +1 1660709..1662466 - 585 126454776 - BURPS1106A_1700 - putative fusaric acid efflux protein 1687 68.68 0 1662639..1663580 + 313 126453910 - BURPS1106A_1701 - LysR family transcriptional regulator 1688 71.26 0 1663719..1663892 + 57 126452819 - BURPS1106A_1702 - hypothetical protein 1689 69.86 0 1663929..1664900 - 323 126451818 - BURPS1106A_1703 - Ser/Thr protein phosphatase family protein 1690 69.62 0 1664932..1666353 - 473 126452159 - BURPS1106A_1704 - oxidoreductase, FAD-binding 1691 74.00 +1 1666388..1666837 - 149 126455080 - BURPS1106A_1705 - hypothetical protein 1692 72.25 0 1666834..1667442 - 202 126454412 - BURPS1106A_1706 - NADPH-dependent FMN reductase 1693 68.34 0 1667548..1668861 + 437 126453311 rbn BURPS1106A_1707 - tRNA-processing ribonuclease BN 1694 68.38 0 1668858..1669148 + 96 126454590 - BURPS1106A_1709 - hypothetical protein 1695 62.62 0 1669114..1669434 - 106 126451727 - BURPS1106A_1708 - membrane protein 1696 62.15 -1 1669651..1670115 + 154 126454211 - BURPS1106A_1710 - CBS domain-containing protein 1697 68.17 0 1670215..1672149 + 644 126455385 - BURPS1106A_1711 - major facilitator superfamily permease 1698 79.01 +2 1672233..1672475 + 80 126452040 - BURPS1106A_1712 - hypothetical protein 1699 70.72 0 1672514..1673623 + 369 126453136 aroC BURPS1106A_1713 - chorismate synthase 1700 57.59 -1 1673775..1674611 - 278 126452763 - BURPS1106A_1714 - transposase 1701 64.72 0 1675272..1677017 - 581 126453991 - BURPS1106A_1715 - electron transfer flavoprotein-ubiquinone oxidoreductase 1702 66.54 0 1677126..1677905 + 259 126454477 - BURPS1106A_1716 - short chain dehydrogenase 1703 65.97 0 1677950..1678381 + 143 126451702 - BURPS1106A_1717 - thioesterase family protein 1704 67.32 0 1678759..1679832 - 357 126451507 - BURPS1106A_1718 - hypothetical protein 1705 63.25 0 1680091..1680207 - 38 126452570 - BURPS1106A_1719 - hypothetical protein 1706 62.75 0 1680341..1680493 - 50 126454450 - BURPS1106A_1720 - hypothetical protein 1707 64.51 0 1680761..1682293 - 510 126451835 - BURPS1106A_1721 - putative lipoprotein 1708 63.57 0 1682324..1682614 + 96 126452883 - BURPS1106A_1722 - hypothetical protein 1709 68.13 0 1682885..1683430 - 181 126454121 - BURPS1106A_1723 - sensory box transcriptional regulator 1710 58.33 -1 1683481..1683612 + 43 126454956 - BURPS1106A_1724 - 3-oxoadipate CoA-succinyl transferase alpha subunit 1711 64.68 0 1683683..1684387 + 234 126452331 - BURPS1106A_1725 - 3-oxoacid CoA-transferase subunit A 1712 65.89 0 1684389..1685030 + 213 126453251 - BURPS1106A_1726 - 3-oxoacid CoA-transferase subunit B 1713 75.10 +1 1685431..1686153 - 240 126454594 - BURPS1106A_1727 - short chain dehydrogenase 1714 71.57 0 1686197..1687297 - 366 126451454 - BURPS1106A_1728 - polysaccharide deacetylase family protein 1715 73.30 +1 1687312..1687869 - 185 126452915 - BURPS1106A_1729 - hypothetical protein 1716 72.30 0 1688057..1688962 + 301 126453195 - BURPS1106A_1730 - LysR family transcriptional regulator 1717 69.12 0 1689848..1691194 + 448 126452037 - BURPS1106A_1731 - alpha/beta fold family hydrolase 1718 66.10 0 1691268..1691621 + 117 126455137 - BURPS1106A_1732 - putative endoribonuclease L-PSP 1719 68.68 0 1691666..1693903 + 745 126454760 relA BURPS1106A_1733 - GTP diphosphokinase 1720 62.11 -1 1694362..1696269 + 635 126453502 thrS BURPS1106A_1735 - threonyl-tRNA synthetase 1721 58.17 -1 1696373..1696843 + 156 126452447 infC BURPS1106A_1736 - translation initiation factor IF-3 1722 59.60 -1 1697036..1697233 + 65 126451610 rpmI BURPS1106A_1737 - 50S ribosomal protein L35 1723 60.56 -1 1697264..1697623 + 119 126455404 rplT BURPS1106A_1738 - 50S ribosomal protein L20 1724 63.73 0 1697763..1698785 + 340 161986643 pheS BURPS1106A_1739 - phenylalanyl-tRNA synthetase subunit alpha 1725 66.71 0 1698873..1701305 + 810 126453391 pheT BURPS1106A_1740 - phenylalanyl-tRNA synthetase subunit beta 1726 64.69 0 1701378..1701782 + 134 126454482 ihfA BURPS1106A_1741 - integration host factor subunit alpha 1727 66.91 0 1701841..1702245 + 134 126453766 - BURPS1106A_1742 - MerR family transcriptional regulator 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0