version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1200 66.87 0 1185049..1188573 + 1174 126453191 dnaE BURPS1106A_1206 - DNA polymerase III subunit alpha 1201 65.22 0 1188679..1190403 + 574 126454551 msbA BURPS1106A_1207 - lipid A export ATP-binding/permease protein MsbA 1202 68.98 0 1190457..1191539 + 360 126453690 lgtG BURPS1106A_1208 - lipooligosaccharide glycosyl transferase G 1203 69.81 0 1191821..1192966 + 381 126451848 - BURPS1106A_1209 - heptosyltransferase 1204 67.44 0 1192963..1194261 + 432 126455061 - BURPS1106A_1210 - hypothetical protein 1205 70.31 0 1194258..1195520 + 420 126454176 - BURPS1106A_1211 - glycosyl transferase, group 1 family protein 1206 68.88 0 1195607..1196779 + 390 126452914 - BURPS1106A_1212 - putative lipopolysaccharide heptosyltransferase III 1207 65.49 0 1197046..1197810 - 254 126454929 - BURPS1106A_1213 - glycosyl transferase, group 2 family protein 1208 70.34 0 1198268..1198648 + 126 126453775 - BURPS1106A_1214 - hypothetical protein 1209 67.00 0 1198929..1199522 - 197 126452639 - BURPS1106A_1215 - hypothetical protein 1210 71.10 0 1199772..1201034 - 420 126451518 - BURPS1106A_1216 - major facilitator transporter 1211 75.23 +1 1201031..1202011 - 326 126451841 - BURPS1106A_1217 - putative lipoprotein 1212 66.67 0 1202345..1202461 - 38 126452982 - BURPS1106A_1218 - hypothetical protein 1213 64.02 0 1202715..1203167 - 150 126454095 - BURPS1106A_1219 - carboxymuconolactone decarboxylase family protein 1214 75.62 +1 1203213..1203659 - 148 126455220 - BURPS1106A_1220 - hypothetical protein 1215 69.13 0 1203656..1204588 - 310 126455217 - BURPS1106A_1221 - RNA polymerase sigma-70 factor 1216 67.36 0 1204727..1205161 - 144 126453916 - BURPS1106A_1222 - hypothetical protein 1217 72.65 0 1205187..1205303 + 38 126455186 - BURPS1106A_1224 - hypothetical protein 1218 64.97 0 1205297..1205590 - 97 126452009 - BURPS1106A_1223 - hypothetical protein 1219 73.46 +1 1206007..1206315 - 102 126455339 - BURPS1106A_1225 - hypothetical protein 1220 71.56 0 1206314..1206640 + 108 126454423 - BURPS1106A_1226 - hypothetical protein 1221 76.00 +1 1206719..1206868 - 49 126452812 - BURPS1106A_1227 - hypothetical protein 1222 69.77 0 1206990..1207118 - 42 126452180 - BURPS1106A_1228 - hypothetical protein 1223 70.01 0 1207789..1208505 + 238 126451452 - BURPS1106A_1229 - putative phospholipase C accessory protein 1224 65.51 0 1208579..1209964 + 461 126454856 - BURPS1106A_1230 - hypothetical protein 1225 69.11 0 1209992..1211380 - 462 126453470 yicE BURPS1106A_1231 - xanthine permease 1226 69.42 0 1211345..1211635 + 96 126453267 - BURPS1106A_1232 - hypothetical protein 1227 65.71 0 1211698..1213164 - 488 126451783 - BURPS1106A_1233 - ribonuclease 1228 73.97 +1 1213173..1213802 - 209 126455201 maf BURPS1106A_1234 - Maf-like protein 1229 71.13 0 1213855..1214325 - 156 126453487 - BURPS1106A_1235 - SPOUT methyltransferase superfamily protein 1230 69.46 0 1214382..1214846 - 154 126452827 - BURPS1106A_1236 - iojap domain-containing protein 1231 75.17 +1 1214851..1215603 - 250 126453400 nadD BURPS1106A_1237 - nicotinic acid mononucleotide adenylyltransferase 1232 69.26 0 1215600..1216523 - 307 126454604 hemF BURPS1106A_1238 - coproporphyrinogen III oxidase 1233 68.23 0 1216654..1217931 - 425 126455187 purD BURPS1106A_1239 - phosphoribosylamine--glycine ligase 1234 64.47 0 1218042..1218770 - 242 126454071 - BURPS1106A_1240 - hypothetical protein 1235 76.91 +1 1218733..1219269 - 178 126452798 - BURPS1106A_1241 - hypothetical protein 1236 66.67 0 1219308..1219958 - 216 126455154 upp BURPS1106A_1242 - uracil phosphoribosyltransferase 1237 72.82 0 1220216..1220995 + 259 126452270 - BURPS1106A_1243 - short chain dehydrogenase/reductase family oxidoreductase 1238 71.25 0 1221234..1221626 + 130 126453334 mgsA BURPS1106A_1244 - methylglyoxal synthase 1239 69.03 0 1222592..1223566 + 324 126452470 - BURPS1106A_1245 - zinc-binding dehydrogenase family oxidoreductase 1240 80.07 +2 1223572..1223862 + 96 126453780 - BURPS1106A_1246 - hypothetical protein 1241 53.17 -2 1223885..1224010 - 41 126454910 - BURPS1106A_1247 - hypothetical protein 1242 61.36 -1 1223992..1224123 + 43 126452063 kdpF BURPS1106A_1248 - potassium-transporting ATPase, KdpF subunit 1243 68.16 0 1224120..1225928 + 602 126453034 kdpA BURPS1106A_1249 - potassium-transporting ATPase subunit A 1244 67.72 0 1225997..1228084 + 695 126454417 kdpB BURPS1106A_1250 - K+-transporting ATPase, B subunit 1245 70.62 0 1228097..1228678 + 193 126453575 kdpC BURPS1106A_1251 - K+-transporting ATPase, C subunit 1246 70.00 0 1228787..1228966 + 59 126452683 - BURPS1106A_1252 - hypothetical protein 1247 72.20 0 1228963..1231944 + 993 126453510 kdpD BURPS1106A_1253 - sensor histidine kinase KdpD 1248 69.50 0 1231931..1232635 + 234 126455264 kdpE BURPS1106A_1254 - KDP operon transcriptional regulatory protein KdpE 1249 70.83 0 1232837..1233004 - 55 126452110 - BURPS1106A_1255 - hypothetical protein 1250 67.34 0 1233025..1233321 + 98 126453138 - BURPS1106A_1256 - hypothetical protein 1251 68.54 0 1233537..1233857 + 106 126454766 - BURPS1106A_1257 - SMR family multidrug efflux pump 1252 69.90 0 1234049..1234666 + 205 126451843 - BURPS1106A_1258 - hypothetical protein 1253 74.16 +1 1234663..1237305 + 880 126452428 - BURPS1106A_1259 - efflux ABC transporter, permease protein 1254 58.54 -1 1237302..1237424 + 40 126454344 - BURPS1106A_1260 - hypothetical protein 1255 68.61 0 1237405..1237815 + 136 126455269 - BURPS1106A_1261 - hypothetical protein 1256 63.57 0 1237837..1237965 + 42 126455116 - BURPS1106A_1262 - hypothetical protein 1257 70.63 0 1237926..1238657 + 243 126452703 - BURPS1106A_1263 - threonyl/alanyl tRNA synthetase domain-containing protein 1258 73.36 +1 1238654..1239295 + 213 126453306 - BURPS1106A_1264 - hypothetical protein 1259 73.48 +1 1239639..1241033 + 464 126454185 - BURPS1106A_1265 - amidase 1260 71.09 0 1241290..1242579 + 429 126454498 - BURPS1106A_1266 - major facilitator family transporter 1261 73.20 +1 1242780..1242932 + 50 126452881 - BURPS1106A_1268 - hypothetical protein 1262 71.29 0 1242890..1244707 - 605 126452353 - BURPS1106A_1267 - hypothetical protein 1263 82.46 +2 1244613..1244726 + 37 126453809 - BURPS1106A_1269 - hypothetical protein 1264 74.18 +1 1245333..1246091 - 252 126454110 - BURPS1106A_1270 - glucose-1-dehydrogenase 1265 67.01 0 1246509..1247096 - 195 126454985 - BURPS1106A_1271 - decarboxylase family protein 1266 59.72 -1 1247093..1247812 - 239 126451830 - BURPS1106A_1272 - TetR family transcriptional regulator 1267 70.33 0 1248049..1248594 - 181 126452688 dgkA BURPS1106A_1273 - diacylglycerol kinase 1268 69.28 0 1248603..1249637 - 344 126454366 - BURPS1106A_1274 - glycosyl transferase, group 1 family protein 1269 65.50 0 1249659..1250597 - 312 126455178 - BURPS1106A_1275 - Ser/Thr protein phosphatase family protein 1270 75.88 +1 1250688..1251197 - 169 126454694 - BURPS1106A_1276 - RDD family protein 1271 71.16 0 1251204..1251959 - 251 126451579 - BURPS1106A_1277 - hypothetical protein 1272 73.76 +1 1251990..1252412 - 140 126454392 - BURPS1106A_1278 - hypothetical protein 1273 62.39 0 1252409..1252969 - 186 126455327 - BURPS1106A_1279 - RNA polymerase factor sigma-70 1274 68.79 0 1253097..1253237 + 46 126455107 - BURPS1106A_1280 - hypothetical protein 1275 63.66 0 1253365..1255128 + 587 126452197 ilvB BURPS1106A_1281 - acetolactate synthase 3 catalytic subunit 1276 60.77 -1 1255240..1255731 + 163 126454468 ilvH BURPS1106A_1282 - acetolactate synthase 3 regulatory subunit 1277 65.39 0 1255814..1256830 + 338 126453783 ilvC BURPS1106A_1283 - ketol-acid reductoisomerase 1278 66.36 0 1256952..1257602 + 216 126453211 psd BURPS1106A_1284 - phosphatidylserine decarboxylase 1279 69.19 0 1257619..1258491 + 290 126452290 pssA BURPS1106A_1285 - CDP-diacylglycerol--serine O-phosphatidyltransferase 1280 64.79 0 1258850..1260397 + 515 126455016 leuA BURPS1106A_1286 - 2-isopropylmalate synthase 1281 68.67 0 1260532..1262079 - 515 126454102 - BURPS1106A_1287 - sulfate permease family inorganic anion transporter 1282 71.70 0 1262136..1262771 - 211 126451942 - BURPS1106A_1288 - putative carbonic anhydrase 1283 64.47 0 1263215..1263715 - 166 126454526 - BURPS1106A_1289 - putative lipoprotein 1284 71.56 0 1263714..1264142 + 142 126453638 - BURPS1106A_1290 - hypothetical protein 1285 70.11 0 1264094..1265371 + 425 126453238 - BURPS1106A_1291 - putative amino acid-binding protein 1286 62.59 0 1265477..1265746 + 89 126451731 rpsO BURPS1106A_1292 - 30S ribosomal protein S15 1287 64.29 0 1265888..1266097 - 69 126455209 - BURPS1106A_1293 - hypothetical protein 1288 66.01 0 1266050..1268191 + 713 126454918 pnp BURPS1106A_1294 - polynucleotide phosphorylase/polyadenylase 1289 69.53 0 1268244..1269326 + 360 126453705 - BURPS1106A_1295 - zinc-binding dehydrogenase family oxidoreductase 1290 71.54 0 1269386..1270186 + 266 126452700 tpiA BURPS1106A_1296 - triosephosphate isomerase 1291 67.46 0 1270266..1270643 + 125 126451944 secG BURPS1106A_1297 - preprotein translocase subunit SecG 1292 56.39 -2 1270992..1271351 + 119 126452694 nuoA BURPS1106A_1299 - NADH dehydrogenase subunit A 1293 65.83 0 1271414..1271893 + 159 126451839 nuoB BURPS1106A_1300 - NADH dehydrogenase subunit B 1294 63.35 0 1271914..1272516 + 200 126454408 nuoC BURPS1106A_1301 - NADH dehydrogenase subunit C 1295 62.84 0 1272527..1273780 + 417 126453345 nuoD BURPS1106A_1302 - NADH dehydrogenase subunit D 1296 60.70 -1 1273949..1274434 + 161 126454652 nuoE BURPS1106A_1303 - NADH dehydrogenase subunit E 1297 66.21 0 1274431..1275741 + 436 126454273 nuoF BURPS1106A_1304 - NADH-quinone oxidoreductase, F subunit 1298 68.64 0 1275824..1278154 + 776 126453390 nuoG BURPS1106A_1305 - NADH dehydrogenase subunit G 1299 63.47 0 1278155..1279219 + 354 126452023 nuoH BURPS1106A_1306 - NADH dehydrogenase subunit H 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0