version 1.0
Burkholderia pseudomallei 1106a chromosome I, complete sequence - 1..3988455 4019 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 974 67.55 0 961169..962305 + 378 126451762 nadA BURPS1106A_0978 - quinolinate synthetase 975 70.06 0 962302..963186 + 294 126454043 nadC BURPS1106A_0979 - nicotinate-nucleotide pyrophosphorylase 976 75.80 +1 963188..963406 + 72 126454503 - BURPS1106A_0981 - hypothetical protein 977 67.54 0 963378..965090 - 570 126454473 nadB BURPS1106A_0980 - L-aspartate oxidase 978 53.57 -2 965147..965314 - 55 126453616 rpmG BURPS1106A_0982 - 50S ribosomal protein L33 979 60.68 -1 965332..965565 - 77 126452424 rpmB BURPS1106A_0983 - 50S ribosomal protein L28 980 74.07 +1 965859..966695 - 278 126455030 radC BURPS1106A_0984 - DNA repair protein RadC 981 65.13 0 966834..967289 + 151 126455033 fkpB BURPS1106A_0985 - peptidyl-prolyl cis-trans isomerase, FKBP-type 982 68.20 0 967292..968272 + 326 126454143 ispH BURPS1106A_0986 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 983 62.50 0 968418..969521 + 367 126452273 - BURPS1106A_0987 - transposase, IS4 984 73.21 +1 969918..970406 + 162 126451663 - BURPS1106A_0988 - hypothetical protein 985 64.77 0 970629..971579 + 316 126453328 - BURPS1106A_0989 - hydrophobic amino acid ABC transporter permease/ATP-binding protein 986 66.24 0 971590..972759 + 389 126454057 - BURPS1106A_0990 - hydrophobic amino acid ABC transporter permease/ATP-binding protein 987 64.73 0 972822..973595 + 257 126453383 - BURPS1106A_0991 - hydrophobic amino acid ABC transporter ATP-binding protein 988 64.71 0 973595..974311 + 238 126452269 - BURPS1106A_0992 - hydrophobic amino acid ABC transporter ATP-binding protein 989 69.60 0 974356..974628 + 90 126452244 - BURPS1106A_0993 - hypothetical protein 990 65.17 0 974625..975293 + 222 126454715 - BURPS1106A_0994 - hypothetical protein 991 72.61 0 975466..975936 - 156 126453563 - BURPS1106A_0995 - putative acetyltransferase 992 66.50 0 975941..977125 - 394 126452494 argD BURPS1106A_0996 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 993 67.05 0 977402..978433 - 343 126454941 - BURPS1106A_0997 - CDP-6-deoxy-delta-3,4-glucoseen reductase 994 71.94 0 978462..979541 + 359 126452148 - BURPS1106A_0999 - NAD-dependent epimerase/dehydratase family protein 995 58.85 -1 979534..979725 - 63 126453803 - BURPS1106A_0998 - hypothetical protein 996 69.16 0 979839..980561 - 240 126454957 - BURPS1106A_1000 - RNA pseudouridine synthase family protein 997 70.16 0 980703..981074 + 123 126454378 - BURPS1106A_1001 - putative copper resistance protein CopC 998 68.64 0 981086..982048 - 320 126453248 - BURPS1106A_1002 - LysR family transcriptional regulator 999 72.69 0 982250..983146 - 298 126452612 - BURPS1106A_1003 - LysR family transcriptional regulator 1000 72.46 0 983268..984164 + 298 126451500 - BURPS1106A_1004 - alpha/beta fold family hydrolase 1001 69.71 0 984418..985107 - 229 126454115 - BURPS1106A_1005 - MOSC domain-containing protein 1002 70.35 0 985122..986018 - 298 126454975 - BURPS1106A_1006 - putative dihydrodipicolinate synthase 1003 68.45 0 986100..986882 - 260 126452376 - BURPS1106A_1007 - hypothetical protein 1004 63.65 0 987014..987577 + 187 126453277 - BURPS1106A_1008 - DNA-binding protein 1005 70.65 0 987676..987876 + 66 126453597 - BURPS1106A_1009 - hypothetical protein 1006 69.49 0 988363..988539 - 58 126452127 - BURPS1106A_1011 - hypothetical protein 1007 64.54 0 988698..989639 - 313 126453673 cysB BURPS1106A_1012 - transcriptional regulator CysB-like protein 1008 65.60 0 989859..991538 + 559 126454547 - BURPS1106A_1013 - sulfite reductase, ferredoxin subunit 1009 70.90 0 991563..992105 + 180 126452080 - BURPS1106A_1014 - hypothetical protein 1010 69.73 0 992102..992851 + 249 126453333 - BURPS1106A_1015 - phosphoadenosine phosphosulfate reductase 1011 68.22 0 992932..993897 + 321 126453969 cysD BURPS1106A_1016 - sulfate adenylyltransferase subunit 2 1012 66.82 0 993920..995236 + 438 126455060 cysN BURPS1106A_1017 - sulfate adenylyltransferase, large subunit 1013 73.39 +1 995296..996069 + 257 126451772 cobA BURPS1106A_1018 - uroporphyrin-III C-methyltransferase 1014 71.83 0 996280..996666 - 128 126452902 - BURPS1106A_1019 - putative sirohydrochlorin cobaltochelatase CbiX 1015 63.63 0 996698..997849 - 383 126453481 - BURPS1106A_1020 - hypothetical protein 1016 64.48 0 997853..998950 - 365 126453581 - BURPS1106A_1021 - hypothetical protein 1017 67.46 0 999071..1000582 + 503 126452701 pepA BURPS1106A_1022 - leucyl aminopeptidase 1018 68.82 0 1000626..1001042 + 138 126454054 holC BURPS1106A_1023 - DNA polymerase III subunit chi 1019 76.17 +1 1001206..1001784 + 192 126455401 - BURPS1106A_1024 - hypothetical protein 1020 64.81 0 1001942..1002265 - 107 126452021 - BURPS1106A_1025 - cytochrome c family protein 1021 66.67 0 1002309..1002431 - 40 126453159 - BURPS1106A_1026 - hypothetical protein 1022 67.44 0 1002479..1004152 - 557 126452792 ilvD BURPS1106A_1027 - dihydroxy-acid dehydratase 1023 74.30 +1 1004330..1005325 + 331 126453441 ilvR BURPS1106A_1028 - isoleucine biosynthesis transcriptional activator IlvR 1024 74.47 +1 1005288..1005428 + 46 126454600 - BURPS1106A_1029 - hypothetical protein 1025 66.78 0 1005432..1006322 + 296 126453449 lgt BURPS1106A_1030 - prolipoprotein diacylglyceryl transferase 1026 69.24 0 1006682..1007419 - 245 126453210 - BURPS1106A_1031 - hypothetical protein 1027 66.45 0 1007618..1008079 - 153 126452025 - BURPS1106A_1032 - hypothetical protein 1028 64.13 0 1008419..1008733 - 104 126455296 - BURPS1106A_1033 - hypothetical protein 1029 62.68 0 1008730..1009080 - 116 126454620 - BURPS1106A_1034 - hypothetical protein 1030 68.61 0 1009619..1011676 + 685 126453524 - BURPS1106A_1035 - putative TonB-dependent vitamin B12 receptor BtuB 1031 76.29 +1 1011728..1012756 + 342 126452870 - BURPS1106A_1036 - cobalamin ABC transporter, permease protein 1032 73.95 +1 1012753..1014675 + 640 126451756 - BURPS1106A_1037 - cobalamin ABC transporter, ATP-binding protein 1033 73.25 +1 1014682..1015440 + 252 126452810 cobS BURPS1106A_1038 - cobalamin synthase 1034 74.83 +1 1015425..1016024 + 199 126451705 cobC BURPS1106A_1039 - alpha-ribazole phosphatase 1035 62.84 0 1016167..1017003 - 278 126455124 - BURPS1106A_1040 - hypothetical protein 1036 72.45 0 1017169..1018101 - 310 126455153 btuF BURPS1106A_1041 - cobalamin ABC transporter, periplasmic cobalamin-binding protein 1037 75.97 +1 1018107..1019159 - 350 126454618 cobD BURPS1106A_1042 - putative threonine-phosphate decarboxylase 1038 77.25 +1 1019152..1020096 - 314 126454403 cobD BURPS1106A_1043 - cobalamin biosynthesis protein 1039 72.89 0 1020090..1020716 - 208 126452828 cobU BURPS1106A_1044 - cobinamide kinase/cobinamide phosphate guanyltransferase 1040 72.14 0 1020675..1022282 + 535 126451503 cobQ BURPS1106A_1045 - cobyric acid synthase 1041 71.46 0 1022563..1022979 + 138 126451717 - BURPS1106A_1046 - DoxX family protein 1042 67.15 0 1023338..1023961 + 207 126454878 - BURPS1106A_1047 - CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein 1043 61.76 -1 1024076..1024462 - 128 126452947 panD BURPS1106A_1048 - aspartate alpha-decarboxylase 1044 68.33 0 1024515..1025354 - 279 126452166 panC BURPS1106A_1049 - pantoate--beta-alanine ligase 1045 64.04 0 1025745..1025858 - 37 126452209 - BURPS1106A_1050 - hypothetical protein 1046 66.55 0 1026043..1026918 - 291 126455189 scpA BURPS1106A_1051 - segregation and condensation protein A 1047 61.38 -1 1026923..1027111 - 62 126453493 - BURPS1106A_1052 - hypothetical protein 1048 68.54 0 1027320..1029137 + 605 126452849 - BURPS1106A_1053 - OMP85 family outer membrane protein 1049 72.93 0 1029151..1033269 + 1372 126453209 - BURPS1106A_1054 - hypothetical protein 1050 67.06 0 1033566..1034330 + 254 126454585 - BURPS1106A_1055 - hypothetical protein 1051 69.53 0 1034327..1035340 + 337 126455167 - BURPS1106A_1056 - O-methyltransferase 1052 67.08 0 1035689..1037866 - 725 126454059 metG BURPS1106A_1057 - methionyl-tRNA synthetase 1053 71.93 0 1038037..1038150 - 37 126452813 - BURPS1106A_1058 - hypothetical protein 1054 69.60 0 1038348..1038995 - 215 126452105 - BURPS1106A_1059 - ompA family protein 1055 60.53 -1 1038992..1039366 - 124 126454662 - BURPS1106A_1060 - hypothetical protein 1056 69.79 0 1039376..1040464 + 362 126452577 - BURPS1106A_1061 - CobQ/CobB/MinD/ParA nucleotide binding protein 1057 73.89 +1 1040597..1041136 + 179 126454894 sodC BURPS1106A_1062 - copper/zinc superoxide dismutase 1058 61.23 -1 1041240..1041809 + 189 126451751 dcd BURPS1106A_1063 - deoxycytidine triphosphate deaminase 1059 64.91 0 1041912..1044191 + 759 126454145 - BURPS1106A_1064 - Orn/Lys/Arg decarboxylase 1060 73.72 +1 1044194..1044916 + 240 126455025 - BURPS1106A_1065 - hypothetical protein 1061 73.63 +1 1045050..1045724 - 224 126455379 - BURPS1106A_1066 - haloacid dehalogenase, IA family protein 1062 68.23 0 1045757..1047166 - 469 126452237 argH BURPS1106A_1067 - argininosuccinate lyase 1063 81.20 +2 1047223..1047339 - 38 126453225 - BURPS1106A_1068 - hypothetical protein 1064 71.75 0 1047336..1049636 - 766 126453579 - BURPS1106A_1069 - fimbrial usher protein 1065 73.00 +1 1050433..1051143 - 236 126451911 - BURPS1106A_1070 - putative pilus assembly chaperone 1066 64.55 0 1051151..1051669 - 172 126452988 - BURPS1106A_1071 - pilus biogenesis protein 1067 66.76 0 1052015..1053052 + 345 126452262 - BURPS1106A_1072 - putative lipoprotein 1068 72.43 0 1053225..1054040 - 271 126454644 - BURPS1106A_1073 - hypothetical protein 1069 72.09 0 1054223..1054978 + 251 126452650 - BURPS1106A_1074 - UbiE/COQ5 family methlytransferase 1070 70.21 0 1055347..1058421 - 1024 126451534 ppc BURPS1106A_1075 - phosphoenolpyruvate carboxylase 1071 72.22 0 1058444..1058623 + 59 126454870 - BURPS1106A_1076 - hypothetical protein 1072 73.03 +1 1058658..1059647 + 329 126455102 hemC BURPS1106A_1077 - porphobilinogen deaminase 1073 70.51 0 1059647..1061626 + 659 126453804 - BURPS1106A_1078 - bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase 67.62 MEAN 5.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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