version 1.0
Burkholderia pseudomallei K96243 chromosome 1, complete sequence - 1..4074542 3399 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 30 66.01 0 30991..31752 + 253 53717669 fliP BPSL0030 - flagellar biosynthesis protein FliP 31 67.77 0 31778..32050 + 90 53717670 fliQ BPSL0031 - flagellar biosynthesis protein FliQ 32 67.69 0 32169..32951 + 260 53717671 fliR BPSL0032 - flagellar biosynthetic protein 33 72.96 +1 33271..33699 - 142 53717672 - BPSL0033 - MerR family transcriptional regulator 34 72.15 0 33781..34656 + 291 53717673 - BPSL0034 - hypothetical protein 35 76.63 +1 34649..35170 + 173 53717674 - BPSL0035 - hypothetical protein 36 66.77 0 35328..36341 + 337 53717675 - BPSL0036 - putative transport protein 37 66.04 0 36425..37222 + 265 53717676 - BPSL0037 - putative ATP-binding ABC transporter protein 38 67.37 0 37241..38098 + 285 53717677 - BPSL0038 - binding-protein-dependent transport systems inner membrane component 39 71.45 0 38176..39555 + 459 53717678 - BPSL0039 - sensor kinase protein 40 67.40 0 39566..40243 + 225 53717679 - BPSL0040 - response regulator protein 41 65.43 0 40566..41693 + 375 53717680 - BPSL0041 - outer membrane porin lipoprotein precursor 42 68.41 0 42169..44181 + 670 53717681 - BPSL0042 - type III restriction-modification system methylase 43 68.12 0 44222..47251 + 1009 53717682 - BPSL0043 - type III restriction system endonuclease 44 66.39 0 47789..48889 + 366 53717683 - BPSL0044 - putative outer membrane porin protein 45 66.35 0 49289..50248 + 319 53717684 - BPSL0045 - AraC family transcription regulator 46 71.17 0 50371..51102 - 243 53717685 - BPSL0046 - ABC transport system ATP-binding protein 47 70.40 0 51475..52197 - 240 53717686 - BPSL0047 - ABC transport system ATP-binding protein 48 73.43 +1 52194..53243 - 349 53717687 - BPSL0048 - hypothetical protein 49 72.70 +1 53240..54118 - 292 53717688 - BPSL0049 - putative branched-chain amino acid transport system permease protein 50 67.78 0 54123..55382 - 419 53717689 - BPSL0050 - hypothetical protein 51 70.52 0 55599..57104 - 501 53717690 - BPSL0051 - putative phenylacetaldehyde dehydrogenase 52 67.43 0 57160..57552 - 130 53717691 - BPSL0052 - hypothetical protein 53 67.65 0 57563..58372 - 269 53717692 - BPSL0053 - hypothetical protein 54 73.06 +1 58418..59215 - 265 53717693 - BPSL0054 - putative short chain dehydrogenase 55 69.96 0 59300..60970 - 556 53717694 - BPSL0055 - glucose-methanol-choline (GMC) oxidoreductase family protein 56 65.20 0 61697..62038 + 113 53717695 - BPSL0056 - PadR-like family transcriptional regulator 57 70.20 0 62035..63222 + 395 53717696 - BPSL0057 - hypothetical protein 58 70.21 0 63895..64881 - 328 53717697 - BPSL0058 - fatty acid desaturase 59 72.04 0 64911..65747 - 278 53717698 - BPSL0059 - hypothetical protein 60 73.33 +1 66187..67281 - 364 53717699 - BPSL0060 - AraC family transcription regulator 61 67.19 0 67394..68530 + 378 53717700 - BPSL0061 - putative acyl-CoA dehydrogenase 62 70.98 0 69196..70401 + 401 53717701 - BPSL0062 - acetyl-CoA acetyltransferase 63 70.86 0 70414..72537 + 707 53717702 - BPSL0063 - putative fatty oxidation complex alpha subunit 64 72.13 0 72925..74058 + 377 53717703 - BPSL0064 - alpha-methylacyl-CoA racemase 65 68.25 0 74135..74701 - 188 53717704 - BPSL0065 - putative lipoprotein 66 67.96 0 75037..75501 - 154 53717705 - BPSL0066 - hypothetical protein 67 66.89 0 76057..76497 + 146 53717706 - BPSL0067 - hypothetical protein 68 68.83 0 76484..76852 + 122 53717707 - BPSL0068 - putative lipoprotein 69 74.44 +1 77520..78278 - 252 53717708 - BPSL0069 - putative transmembrane regulator 70 69.19 0 78275..78790 - 171 53717709 - BPSL0070 - putative RNA polymerase sigma factor 71 70.53 0 78951..80036 + 361 53717710 - BPSL0071 - putative catalase 72 64.58 0 80033..80560 + 175 53717711 - BPSL0072 - putative type-b cytochrome 73 64.24 0 81428..83896 - 822 53717712 gyrB BPSL0073 - DNA gyrase subunit B 74 63.59 0 84085..85188 - 367 53717713 dnaN BPSL0074 - DNA polymerase III subunit beta 75 65.67 0 85351..86952 - 533 53717714 dnaA BPSL0075 - chromosomal replication initiation protein 76 65.93 0 87398..87532 + 44 53717715 rpmH BPSL0075a - 50S ribosomal protein L34 77 68.37 0 87606..88016 + 136 53717716 rnpA BPSL0076 - ribonuclease P protein component 78 64.07 0 88096..88365 + 89 53717717 - BPSL0077 - hypothetical protein 79 64.16 0 88374..90050 + 558 53717718 - BPSL0078 - putative inner membrane protein translocase component YidC 80 60.61 -1 90207..90668 - 153 53717719 - BPSL0079 - hypothetical protein 81 69.02 0 90964..92367 + 467 53717720 trmE BPSL0080 - tRNA modification GTPase TrmE 82 59.84 -1 92536..93765 + 409 53717721 intA BPSL0081 - putative phage integrase 83 66.81 0 94413..97280 - 955 53717722 - BPSL0082 - hypothetical protein 84 64.33 0 97405..97746 - 113 53717723 - BPSL0083 - hypothetical protein 85 61.63 -1 97743..98000 - 85 53717724 - BPSL0084 - hypothetical protein 86 69.49 0 97993..98169 - 58 53717725 - BPSL0085 - hypothetical protein 87 67.50 0 98537..99016 - 159 53717726 - BPSL0086 - hypothetical protein 88 54.98 -2 99409..99930 - 173 53717727 - BPSL0087 - putative DNA-binding protein 89 61.33 -1 100338..101255 - 305 53717728 - BPSL0088 - hypothetical protein 90 57.68 -2 101248..102249 - 333 53717729 - BPSL0089 - hypothetical protein 91 61.61 -1 102609..103439 - 276 53717730 - BPSL0090 - putative transposase protein 92 56.82 -2 103466..103729 - 87 53717731 - BPSL0091 - putative transposase protein 93 58.90 -1 104028..104915 - 295 53717732 - BPSL0092 - putative lipoprotein 94 65.80 0 105283..106440 + 385 53717733 - BPSL0093 - putative lipoprotein 95 61.54 -1 106503..106658 + 51 53717734 - BPSL0094 - putative lipoprotein 96 60.90 -1 107005..107316 + 103 53717735 - BPSL0095 - hypothetical protein 97 57.04 -2 107334..107894 + 186 53717736 speG BPSL0096 - spermidine n(1)-acetyltransferase 98 59.71 -1 108383..108727 + 114 53717737 - BPSL0097 - hypothetical protein 99 67.57 0 108943..109497 + 184 53717738 - BPSL0098 - hypothetical protein 100 67.39 0 109682..110098 - 138 53717739 - BPSL0099 - glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 101 70.05 0 110500..111594 + 364 53717740 - BPSL0100 - O6-methylguanine-DNA methyltransferase 102 74.95 +1 111591..112532 + 313 53717741 - BPSL0101 - putative DNA-3-methyladenine glycosylase II 103 68.10 0 112703..114304 + 533 53717742 - BPSL0102 - glutamate--cysteine ligase 104 70.46 0 114323..115771 - 482 53717743 - BPSL0103 - RNA polymerase sigma factor 105 69.76 0 116034..116582 - 182 53717744 - BPSL0104 - hypothetical protein 106 66.67 0 116974..117090 + 38 53717745 - BPSL0105 - hypothetical protein 107 66.49 0 117179..117748 - 189 53717746 - BPSL0106 - hypothetical protein 108 71.52 0 117851..118819 - 322 53717747 - BPSL0107 - LysR family transcriptional regulator 109 65.21 0 118962..120056 + 364 53717748 - BPSL0108 - putative extracellular solute-binding lipoprotein 110 70.35 0 120085..121197 + 370 53717749 - BPSL0109 - histone deacetylase family protein 111 67.58 0 121208..122083 + 291 53717750 - BPSL0110 - putative carbon-nitrogen hydrolase 112 65.68 0 123313..124425 + 370 53717751 - BPSL0111 - portal protein 113 62.46 -1 124499..124783 - 94 53717752 - BPSL0112 - hypothetical protein 114 61.28 -1 124780..125262 - 160 53717753 - BPSL0113 - hypothetical protein 115 51.74 -2 125800..126804 - 334 53717754 - BPSL0113A - hypothetical protein 116 62.47 -1 127678..128082 + 134 53717755 - BPSL0114 - hypothetical protein 117 69.77 0 128120..128989 + 289 53717756 - BPSL0115 - patatin-like phospholipase family protein 118 66.86 0 129110..130126 - 338 53717757 - BPSL0116 - D-isomer specific 2-hydroxyacid dehydrogenase 119 67.14 0 130565..131620 + 351 53717758 - BPSL0117 - LysR family transcriptional regulator 120 64.83 0 131843..134452 - 869 53717759 - BPSL0118 - DNA topoisomerase III 121 65.32 0 134663..135034 - 123 53717760 - BPSL0119 - putative thioredoxin 122 74.56 +1 135094..136284 - 396 53717761 - BPSL0120 - SMF family protein 123 61.71 -1 136513..137016 + 167 53717762 def BPSL0121 - peptide deformylase 124 72.66 +1 137048..138031 + 327 53717763 fmt BPSL0122 - methionyl-tRNA formyltransferase 125 66.67 0 138152..138787 + 211 53717764 - BPSL0123 - putative LysE type translocator protein 126 65.15 0 138897..139754 + 285 53717765 - BPSL0124 - heat shock protein HtpX 127 72.41 +1 140228..141637 + 469 53717766 sun BPSL0125 - NOL1/NOP2/Sun family protein 128 64.30 0 141634..142224 + 196 53717767 - BPSL0126 - hypothetical protein 129 66.79 0 142226..144634 + 802 53717768 - BPSL0127 - sensor kinase protein 67.43 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.