version 1.0
Burkholderia pseudomallei K96243 chromosome 1, complete sequence - 1..4074542 3399 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3129 62.43 -1 3765568..3766299 + 243 53720768 - BPSL3161 - putative outer membrane protein 3130 72.31 +1 3766445..3767206 - 253 53720769 ugpQ BPSL3162 - cytoplasmic glycerophosphodiester phosphodiesterase 3131 70.54 0 3767251..3768333 - 360 53720770 ugpC BPSL3163 - glycerol-3-phosphate transporter ATP-binding subunit 3132 65.01 0 3768359..3769204 - 281 53720771 - BPSL3164 - glycerol-3-phosphate transporter membrane protein 3133 65.42 0 3769201..3770085 - 294 53720772 - BPSL3165 - putative ABC transporter permease 3134 65.76 0 3770216..3771541 - 441 53720773 - BPSL3166 - glycerol-3-phosphate transporter periplasmic binding protein 3135 67.88 0 3771626..3772858 - 410 53720774 - BPSL3167 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 3136 68.24 0 3772907..3773986 - 359 53720775 aroB BPSL3168 - 3-dehydroquinate synthase 3137 65.41 0 3773983..3774537 - 184 53720776 aroK BPSL3169 - shikimate kinase 3138 69.98 0 3774618..3775946 - 442 53720777 - BPSL3170 - putative secretion system protein 3139 75.10 +1 3776333..3777292 - 319 53720778 - BPSL3171 - hypothetical protein 3140 74.74 +1 3777289..3777969 - 226 53720779 - BPSL3172 - hypothetical protein 3141 75.74 +1 3777966..3778913 - 315 53720780 - BPSL3173 - hypothetical protein 3142 66.49 0 3779227..3781548 + 773 53720781 mrcA BPSL3174 - penicillin-binding protein 1A 3143 66.36 0 3781664..3781990 - 108 53720782 cyaY BPSL3175 - frataxin-like protein 3144 72.98 +1 3782027..3782311 + 94 53720783 - BPSL3175A - putative lipoprotein 3145 68.79 0 3782322..3783593 + 423 53720784 lysA BPSL3176 - diaminopimelate decarboxylase 3146 69.89 0 3783852..3784565 - 237 53720785 - BPSL3177 - putative sulfite oxidase subunit YedZ 3147 65.26 0 3784587..3785582 - 331 53720786 - BPSL3178 - putative sulfite oxidase subunit YedY 3148 65.91 0 3785760..3786950 - 396 53720787 - BPSL3179 - putative cytochrome C biogenesis protein 3149 66.33 0 3786955..3789054 - 699 53720788 - BPSL3180 - putative cytochrome C biogenesis protein 3150 65.90 0 3789263..3789910 - 215 53720789 - BPSL3181 - cytochrome C 3151 65.91 0 3790127..3790786 + 219 53720790 engB BPSL3182 - GTPase EngB 3152 65.16 0 3791004..3792068 + 354 53720791 hemB BPSL3183 - delta-aminolevulinic acid dehydratase 3153 69.00 0 3792284..3794167 - 627 53720792 dsbD BPSL3184 - thiol:disulfide interchange protein DsbD 3154 65.24 0 3794160..3794510 - 116 53720793 - BPSL3185 - putative periplasmic cytochrome biogenesis protein 3155 62.63 -1 3794645..3795040 - 131 53720794 rplQ BPSL3186 - 50S ribosomal protein L17 3156 62.68 0 3795181..3796158 - 325 53720795 rpoA BPSL3187 - DNA-directed RNA polymerase subunit alpha 3157 62.66 0 3796286..3796909 - 207 53720796 rpsD BPSL3188 - 30S ribosomal protein S4 3158 65.17 0 3797060..3797461 - 133 53720797 rpsK BPSL3189 - 30S ribosomal protein S11 3159 61.75 -1 3797485..3797850 - 121 53720798 rpsM BPSL3190 - 30S ribosomal protein S13 3160 54.70 -2 3797889..3798005 - 38 53720799 rpmJ BPSL3191 - 50S ribosomal protein L36 3161 53.42 -2 3798026..3798244 - 72 53720800 infA BPSL3192 - translation initiation factor IF-1 3162 61.02 -1 3798254..3799600 - 448 161723191 secY BPSL3193 - preprotein translocase subunit SecY 3163 64.14 0 3799645..3800079 - 144 53720802 rplO BPSL3194 - 50S ribosomal protein L15 3164 60.11 -1 3800108..3800290 - 60 53720803 rpmD BPSL3195 - 50S ribosomal protein L30 3165 64.55 0 3800306..3800824 - 172 53720804 rpsE BPSL3196 - 30S ribosomal protein S5 3166 65.57 0 3800838..3801203 - 121 53720805 rplR BPSL3197 - 50S ribosomal protein L18 3167 62.34 -1 3801216..3801746 - 176 53720806 rplF BPSL3198 - 50S ribosomal protein L6 3168 62.37 -1 3801767..3802162 - 131 53720807 rpsH BPSL3199 - 30S ribosomal protein S8 3169 61.44 -1 3802177..3802482 - 101 53720808 rpsN BPSL3200 - 30S ribosomal protein S14 3170 58.70 -1 3802490..3803029 - 179 53720809 rplE BPSL3201 - 50S ribosomal protein L5 3171 59.87 -1 3803047..3803355 - 102 53720810 rplX BPSL3202 - 50S ribosomal protein L24 3172 59.08 -1 3803365..3803733 - 122 53720811 rplN BPSL3203 - 50S ribosomal protein L14 3173 57.88 -1 3804043..3804315 - 90 53720812 rpsQ BPSL3204 - 30S ribosomal protein S17 3174 57.95 -1 3804312..3804506 - 64 53720813 rpmC BPSL3205 - 50S ribosomal protein L29 3175 61.15 -1 3804516..3804932 - 138 53720814 rplP BPSL3206 - 50S ribosomal protein L16 3176 63.05 0 3804935..3805735 - 266 53720815 rpsC BPSL3207 - 30S ribosomal protein S3 3177 59.39 -1 3805747..3806076 - 109 53720816 rplV BPSL3208 - 50S ribosomal protein L22 3178 56.52 -2 3806089..3806364 - 91 53720817 rpsS BPSL3209 - 30S ribosomal protein S19 3179 66.30 0 3806375..3807202 - 275 53720818 rplB BPSL3210 - 50S ribosomal protein L2 3180 56.19 -2 3807205..3807519 - 104 53720819 rplW BPSL3211 - 50S ribosomal protein L23 3181 61.03 -1 3807516..3808136 - 206 53720820 rplD BPSL3212 - 50S ribosomal protein L4 3182 63.03 0 3808136..3808795 - 219 53720821 rplC BPSL3213 - 50S ribosomal protein L3 3183 61.86 -1 3808983..3809294 - 103 53720822 rpsJ BPSL3214 - 30S ribosomal protein S10 3184 62.97 0 3809447..3810637 - 396 53720823 tuf BPSL3215 - elongation factor Tu 3185 61.96 -1 3810679..3812781 - 700 53720824 fusA BPSL3216 - elongation factor G 3186 60.08 -1 3812903..3813373 - 156 53720825 rpsG BPSL3217 - 30S ribosomal protein S7 3187 61.68 -1 3813544..3813924 - 126 53720826 rpsL BPSL3218 - 30S ribosomal protein S12 3188 67.65 0 3814140..3816074 - 644 53720827 recQ BPSL3219 - ATP-dependent DNA helicase RecQ 3189 64.05 0 3816188..3820426 - 1412 53720828 rpoC BPSL3220 - DNA-directed RNA polymerase subunit beta' 3190 63.06 0 3820448..3824554 - 1368 53720829 rpoB BPSL3221 - DNA-directed RNA polymerase subunit beta 3191 61.56 -1 3824918..3825250 - 110 53720830 rplL BPSL3222 - 50S ribosomal protein L7/L12 3192 60.64 -1 3825356..3825853 - 165 53720831 rplJ BPSL3223 - 50S ribosomal protein L10 3193 65.24 0 3826151..3826849 - 232 53720832 rplA BPSL3224 - 50S ribosomal protein L1 3194 61.81 -1 3826850..3827281 - 143 53720833 rplK BPSL3225 - 50S ribosomal protein L11 3195 60.04 -1 3827427..3827984 - 185 53720834 nusG BPSL3226 - transcription antitermination protein NusG 3196 55.38 -2 3827986..3828366 - 126 53720835 secE BPSL3227 - preprotein translocase subunit SecE 3197 63.06 0 3828544..3829734 - 396 53720836 tuf BPSL3228 - elongation factor Tu 3198 70.50 0 3836722..3837999 - 425 53720837 - BPSL3229 - hypothetical protein 3199 65.87 0 3838612..3839610 + 332 53720838 paaA BPSL3230 - phenylacetate-CoA oxygenase subunit PaaA 3200 63.16 0 3839673..3839957 + 94 53720839 paaB BPSL3231 - phenylacetate-CoA oxygenase subunit PaaB 3201 68.03 0 3839968..3840771 + 267 53720840 paaC BPSL3232 - phenylacetic acid degradation protein PaaC 3202 73.91 +1 3840807..3841427 + 206 53720841 paaD BPSL3233 - phenylacetic acid degradation protein PaaD 3203 67.58 0 3841429..3842517 + 362 53720842 paaE BPSL3234 - phenylacetic acid degradation NADH oxidoreductase PaaE 3204 70.76 0 3842639..3843469 + 276 53720843 - BPSL3235 - hypothetical protein 3205 65.33 0 3843496..3844095 + 199 53720844 - BPSL3236 - TetR family transcriptional regulator 3206 64.92 0 3844299..3844985 + 228 53720845 - BPSL3237 - hypothetical protein 3207 65.31 0 3845104..3845619 - 171 53720846 - BPSL3238 - AsnC family transcriptional regulator 3208 63.11 0 3845771..3846868 + 365 53720847 - BPSL3239 - 4-hydroxyphenylpyruvate dioxygenase 3209 67.68 0 3847104..3847301 - 65 53720848 - BPSL3240 - putative outer membrane protein 3210 68.23 0 3847621..3851202 + 1193 53720849 - BPSL3241 - indolepyruvate ferredoxin oxidoreductase 3211 66.97 0 3851722..3853992 - 756 53720850 - BPSL3242 - malic enzyme 3212 64.19 0 3854521..3855207 + 228 53720851 pyrE BPSL3243 - orotate phosphoribosyltransferase 3213 71.86 0 3855508..3856104 + 198 53720852 - BPSL3244 - putative lipoprotein 3214 68.75 0 3856491..3857066 + 191 53720853 - BPSL3245 - putative flavoprotein (regulator) 3215 68.15 0 3857219..3858163 + 314 53720854 argC BPSL3246 - N-acetyl-gamma-glutamyl-phosphate reductase 3216 69.02 0 3858608..3860011 + 467 53720855 - BPSL3247 - putative lipoprotein 3217 67.31 0 3860137..3861387 + 416 53720856 - BPSL3248 - putative lipoprotein 3218 65.94 0 3861407..3862237 + 276 53720857 - BPSL3249 - putative outer membrane protein 3219 72.10 0 3862424..3863362 - 312 53720858 - BPSL3250 - LysR family transcriptional regulator 3220 75.80 +1 3863545..3864726 + 393 53720859 - BPSL3251 - putative inner membrane transport protein 3221 68.12 0 3864817..3865575 - 252 53720860 - BPSL3252 - putative amino acid transport protein 3222 70.92 0 3865584..3866453 - 289 53720861 - BPSL3253 - putative oxidoreductase 3223 68.92 0 3866580..3867335 + 251 53720862 - BPSL3254 - hypothetical protein 3224 61.84 -1 3867516..3867743 + 75 53720863 - BPSL3254A - hypothetical protein 3225 68.87 0 3868783..3869190 + 135 53720864 - BPSL3254B - hypothetical protein 3226 65.09 0 3870399..3870716 - 105 53720865 - BPSL3255 - hypothetical protein 3227 64.39 0 3871231..3872637 + 468 53720866 - BPSL3256 - putative amino acid permease 3228 57.78 -2 3873083..3874084 + 333 53720867 - BPSL3257 - putative plasmid recombinase 67.43 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0