version 1.0
Burkholderia pseudomallei K96243 chromosome 1, complete sequence - 1..4074542 3399 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2811 70.92 0 3402853..3404262 + 469 53720450 - BPSL2842 - putative FAD-binding oxidase 2812 69.08 0 3404327..3405820 + 497 53720451 glcD BPSL2843 - putative glycolate oxidase subunit GlcD 2813 72.64 +1 3405922..3407010 + 362 53720452 glcE BPSL2844 - glycolate oxidase FAD binding subunit 2814 69.52 0 3407017..3408243 + 408 53720453 glcF BPSL2845 - glycolate oxidase iron-sulfur subunit 2815 71.67 0 3408489..3409187 + 232 53720454 - BPSL2846 - hypothetical protein 2816 73.06 +1 3409222..3410034 + 270 53720455 - BPSL2847 - pyrroline-5-carboxylate reductase 2817 69.73 0 3410457..3411272 - 271 53720456 phnE BPSL2848 - putative phosphonate transport protein PhnE 2818 65.36 0 3411269..3412264 - 331 53720457 phnD BPSL2849 - putative phosphonates-binding periplasmic protein precursor 2819 71.81 0 3412347..3413318 - 323 53720458 phnC BPSL2850 - putative phosphonates transport ATP-binding protein PhnC 2820 72.06 0 3413504..3414634 - 376 53720459 phnM BPSL2851 - putative phosphonate metabolism PhnM protein 2821 72.81 +1 3414649..3415446 - 265 53720460 phnL BPSL2852 - putative phosphonates transport ATP-binding protein PhnL 2822 68.74 0 3415455..3416225 - 256 53720461 phnK BPSL2853 - phosphonates transport ATP-binding protein 2823 68.62 0 3416222..3417196 - 324 53720462 phnJ BPSL2854 - putative phosphonate metabolism PhnJ protein 2824 71.44 0 3417193..3418407 - 404 53720463 phnI BPSL2855 - putative phosphonate metabolism PhnI protein 2825 73.97 +1 3418407..3419036 - 209 53720464 phnH BPSL2856 - carbon-phosphorus lyase complex subunit 2826 72.50 +1 3419033..3419581 - 182 53720465 phnG BPSL2857 - putative phosphonate metabolism PhnG protein 2827 68.86 0 3419714..3420532 + 272 53720466 phnF BPSL2858 - GntR family transcriptional regulator 2828 77.32 +2 3420522..3421319 + 265 53720467 - BPSL2859 - hypothetical protein 2829 71.17 0 3421316..3421870 + 184 53720468 phnN BPSL2860 - putative ATP-binding protein PhnN 2830 66.04 0 3422301..3423251 - 316 53720469 ubiA BPSL2861 - 4-hydroxybenzoate octaprenyltransferase 2831 72.07 0 3423627..3424163 - 178 53720470 - BPSL2862 - hypothetical protein 2832 64.42 0 3424448..3424936 - 162 53720471 - BPSL2863 - ferritin DPS family DNA-binding protein 2833 78.16 +2 3425136..3425309 - 57 53720472 - BPSL2864 - hypothetical protein 2834 69.16 0 3425408..3427654 - 748 53720473 katG BPSL2865 - catalase-peroxidase protein 2835 65.62 0 3428080..3429039 - 319 53720474 oxyR BPSL2866 - oxidative stress regulatory protein 2836 73.25 +1 3429175..3431421 - 748 53720475 recG BPSL2867 - putative ATP-dependent DNA helicase 2837 71.56 0 3432038..3433120 + 360 53720476 queA BPSL2868 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2838 66.58 0 3433421..3434614 + 397 53720477 tgt BPSL2869 - queuine tRNA-ribosyltransferase 2839 60.86 -1 3435044..3435370 + 108 53720478 yajC BPSL2870 - preprotein translocase subunit YajC 2840 68.69 0 3435478..3437502 + 674 53720479 secD BPSL2871 - preprotein translocase subunit SecD 2841 63.41 0 3437518..3438468 + 316 53720480 secF BPSL2872 - preprotein translocase subunit SecF 2842 68.11 0 3438714..3439337 - 207 53720481 - BPSL2873 - hypothetical protein 2843 64.25 0 3439438..3440016 - 192 53720482 - BPSL2874 - hypothetical protein 2844 63.81 0 3440083..3440643 - 186 53720483 - BPSL2875 - hypothetical protein 2845 66.49 0 3440655..3441218 - 187 53720484 - BPSL2876 - putative cytochrome b-561 membrane protein 2846 67.73 0 3441483..3442139 + 218 53720485 - BPSL2877 - putative paraquat-inducible protein 2847 68.33 0 3442136..3442798 + 220 53720486 - BPSL2878 - putative paraquat-inducible protein 2848 67.39 0 3442785..3444446 + 553 53720487 lpw206-207 BPSL2879 - paraquat-inducible protein 2849 76.01 +1 3444443..3445213 + 256 53720488 - BPSL2880 - putative lipoprotein 2850 70.25 0 3446148..3448265 + 705 53720489 - BPSL2881 - hypothetical protein 2851 71.62 0 3448434..3449726 + 430 53720490 - BPSL2882 - putative RNA-methylase protein 2852 64.23 0 3451155..3451565 + 136 53720491 - BPSL2883 - hypothetical protein 2853 70.45 0 3452044..3452730 + 228 53720492 - BPSL2884 - hypothetical protein 2854 65.36 0 3453240..3454694 - 484 53720493 pntB BPSL2885 - NAD(P) transhydrogenase subunit beta 2855 64.85 0 3454691..3455020 - 109 53720494 pntAB BPSL2886 - NAD(P) transhydrogenase subunit alpha 2856 71.23 0 3455033..3456172 - 379 53720495 pntAA BPSL2887 - NAD(P) transhydrogenase subunit alpha 2857 71.37 0 3456416..3456925 + 169 53720496 - BPSL2888 - putative hydrolase 2858 68.66 0 3456922..3458073 + 383 53720497 trmU BPSL2889 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2859 68.80 0 3458195..3459835 + 546 53720498 - BPSL2890 - putative glutamate synthase 2860 65.85 0 3460103..3460711 - 202 53720499 - BPSL2891 - putative glutathione S-transferase-related protein 2861 72.48 +1 3461269..3462678 + 469 53720500 - BPSL2892 - aminopeptidase P 2862 74.62 +1 3462723..3463916 + 397 53720501 - BPSL2893 - hypothetical protein 2863 67.70 0 3464124..3465188 + 354 53720502 - BPSL2894 - putative nitrogen regulation-related protein 2864 59.40 -1 3465185..3465418 + 77 53720503 fis BPSL2895 - DNA-binding protein Fis 2865 66.73 0 3465463..3467028 + 521 53720504 purH BPSL2896 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2866 70.72 0 3467395..3467937 + 180 53720505 ruvC BPSL2897 - Holliday junction resolvase 2867 66.84 0 3468011..3468592 + 193 53720506 ruvA BPSL2898 - Holliday junction DNA helicase motor protein 2868 69.09 0 3468774..3469844 + 356 53720507 ruvB BPSL2899 - Holliday junction DNA helicase B 2869 72.20 0 3469870..3470826 + 318 53720508 - BPSL2900 - hypothetical protein 2870 70.43 0 3470958..3472100 + 380 53720509 - BPSL2901 - putative lipoprotein 2871 68.99 0 3472256..3472945 - 229 53720510 - BPSL2902 - putative phosphoglycerate mutase 2872 72.50 +1 3472953..3473432 - 159 53720511 dtd BPSL2903 - D-tyrosyl-tRNA deacylase 2873 64.81 0 3473503..3474744 - 413 53720512 tyrZ BPSL2904 - tyrosyl-tRNA synthetase 2874 72.85 +1 3474875..3476086 + 403 53720513 anmK BPSL2905 - anhydro-N-acetylmuramic acid kinase 2875 66.95 0 3476197..3476895 - 232 53720514 - BPSL2906 - putative glutathione S-transferase-like protein 2876 68.65 0 3476900..3477604 - 234 53720515 - BPSL2907 - putative glutathione S-transferase like protein 2877 70.21 0 3477697..3478599 + 300 53720516 - BPSL2908 - AraC family transcriptional regulator 2878 61.25 -1 3478769..3479137 - 122 53720517 - BPSL2909 - iron-sulfur cluster insertion protein ErpA 2879 63.36 0 3479344..3479736 - 130 53720518 rpsI BPSL2910 - 30S ribosomal protein S9 2880 59.91 -1 3479748..3480176 - 142 53720519 rplM BPSL2911 - 50S ribosomal protein L13 2881 63.59 0 3480846..3481268 + 140 53720520 - BPSL2912 - putative OsmC-like protein 2882 72.84 +1 3481935..3482777 - 280 53720521 - BPSL2913 - hypothetical protein 2883 69.78 0 3483172..3484230 - 352 53720522 pyrC BPSL2914 - dihydroorotase 2884 65.79 0 3484440..3485354 + 304 53720523 - BPSL2915 - hypothetical protein 2885 63.72 0 3485801..3486139 - 112 53720524 - BPSL2916 - hypothetical protein 2886 69.05 0 3486496..3486915 - 139 53720525 - BPSL2917 - putative heat shock Hsp20-related protein 2887 62.81 0 3486981..3487421 - 146 53720526 - BPSL2918 - putative heat shock Hsp20-related protein 2888 65.41 0 3487884..3488201 + 105 53720527 groES2 BPSL2919 - 10 kDa chaperonin 2889 61.57 -1 3488496..3488750 + 84 53720528 - BPSL2920 - hypothetical protein 2890 60.61 -1 3488860..3489585 - 241 53720529 gltL BPSL2921 - glutamate/aspartate transport ATP-binding protein 2891 64.31 0 3489582..3490259 - 225 53720530 gltK BPSL2922 - glutamate/aspartate transport system permease protein 2892 62.89 0 3490259..3490999 - 246 53720531 gltJ BPSL2923 - glutamate/aspartate transport system permease protein 2893 60.24 -1 3491082..3491984 - 300 53720532 gltI BPSL2924 - glutamate/aspartate periplasmic binding protein precursor 2894 66.21 0 3492208..3493512 - 434 53720533 - BPSL2925 - putative glutamate dehydrogenase 2895 70.14 0 3493893..3494843 - 316 53720534 - BPSL2926 - LysR family transcriptional regulator 2896 71.33 0 3495261..3496718 + 485 53720535 - BPSL2927 - putative nitrate transporter 2897 65.98 0 3496763..3498214 + 483 53720536 purB BPSL2928 - adenylosuccinate lyase 2898 65.90 0 3498335..3498853 - 172 53720537 - BPSL2929 - putative thermoresistant gluconokinase 2899 66.01 0 3498867..3500228 - 453 53720538 - BPSL2930 - putative gluconate permease 2900 71.11 0 3500448..3501077 - 209 53720539 eda BPSL2931 - KHG/KDPG aldolase 2901 69.90 0 3501096..3502949 - 617 53720540 edd BPSL2932 - phosphogluconate dehydratase 2902 70.57 0 3503247..3504245 + 332 53720541 - BPSL2933 - putative regulatory protein 2903 63.59 0 3504716..3505138 - 140 53720542 - BPSL2934 - hypothetical protein 2904 68.79 0 3505156..3506427 - 423 161723197 proA BPSL2935 - gamma-glutamyl phosphate reductase 2905 73.09 +1 3506570..3507658 - 362 53720544 holA BPSL2936 - DNA polymerase III subunit delta 2906 67.57 0 3507704..3508255 - 183 53720545 - BPSL2937 - putative lipoprotein 2907 66.55 0 3508297..3510891 - 864 53720546 leuS BPSL2938 - leucyl-tRNA synthetase 2908 73.68 +1 3511066..3511578 - 170 53720547 - BPSL2939 - putative transport-related membrane protein 2909 74.15 +1 3511619..3512326 - 235 53720548 - BPSL2940 - putative transport-related membrane protein 2910 69.52 0 3512355..3513161 - 268 53720549 dapB BPSL2941 - dihydrodipicolinate reductase 67.43 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0