version 1.0
Burkholderia pseudomallei K96243 chromosome 1, complete sequence - 1..4074542 3399 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2756 72.68 +1 3326472..3327170 - 232 53720395 - BPSL2786 - putative acetyltransferase protein 2757 70.08 0 3327179..3328498 - 439 53720396 wcbT BPSL2787 - putative acyl-CoA transferase 2758 71.46 0 3328563..3329480 - 305 53720397 wcbS BPSL2788 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2759 70.59 0 3329477..3337117 - 2546 53720398 wcbR BPSL2789 - capsular polysaccharide biosynthesis fatty acid synthase 2760 60.73 -1 3337120..3338652 - 510 53720399 wcbQ BPSL2790 - putative capsular polysaccharide biosynthesis transmembrane protein 2761 68.95 0 3338654..3339442 - 262 53720400 wcbP BPSL2791 - putative capsular polysaccharide biosynthesis dehydrogenase/reductase protein 2762 59.02 -1 3339439..3340641 - 400 53720401 wcbO BPSL2792 - putative capsule polysaccharide biosynthesis/export protein 2763 60.18 -1 3340908..3341477 - 189 53720402 wcbN BPSL2793 - putative D-glycero-d-manno-heptose 1,7-bisphosphate phosphatase 2764 59.16 -1 3341474..3342166 - 230 53720403 wcbM BPSL2794 - putative D-glycero-d-manno-heptose 1-phosphate guanosyltransferase 2765 60.44 -1 3342168..3342761 - 197 53720404 gmhA BPSL2795 - putative sedoheptulose 7-phosphate isomerase 2766 58.31 -1 3342743..3343783 - 346 53720405 wcbL BPSL2796 - putative sugar kinase 2767 58.97 -1 3343799..3344812 - 337 53720406 wcbK BPSL2797 - putative GDP sugar epimerase/dehydratase protein 2768 57.53 -2 3344822..3345664 - 280 53720407 wcbJ BPSL2798 - putative capsular polysaccharide biosynthesis protein 2769 52.50 -2 3345661..3346599 - 312 53720408 wcbI BPSL2799 - putative capsular polysaccharide biosynthesis protein 2770 56.71 -2 3346614..3348410 - 598 53720409 wcbH BPSL2800 - putative glycosyl transferase 2771 57.64 -2 3348407..3349348 - 313 53720410 wcbG BPSL2801 - putative capsular polysaccharide biosynthesis protein 2772 55.78 -2 3349358..3350680 - 440 53720411 wcbF BPSL2802 - putative capsule polysaccharide biosynthesis protein 2773 54.59 -2 3350703..3352226 - 507 53720412 wcbE BPSL2803 - putative glycosyltransferase 2774 50.53 -2 3352259..3352915 - 218 53720413 wzt2 BPSL2804 - putative ATP-binding ABC transporter capsular polysaccharide export protein 2775 52.87 -2 3352912..3353694 - 260 53720414 wzm BPSL2805 - putative capsular polysaccharide export ABC transporter transmembrane protein 2776 56.74 -2 3353701..3354849 - 382 53720415 wcbD BPSL2806 - putative capsule polysaccharide export ABC transporter transmembrane protein 2777 60.82 -1 3355330..3356493 - 387 53720416 wcbC BPSL2807 - putative capsular polysaccharide biosynthesis/export protein 2778 60.76 -1 3356674..3357825 + 383 53720417 wcbB BPSL2808 - putative capsular polysaccharide glycosyltransferase biosynthesis protein 2779 65.33 0 3357826..3359841 + 671 53720418 wcbA BPSL2809 - putative capsule polysaccharide export protein 2780 62.61 -1 3360240..3361667 + 475 53720419 manC BPSL2810 - putative GDP-mannose pyrophosphorylase 2781 65.96 0 3361929..3362774 + 281 53720420 - BPSL2811 - hypothetical protein 2782 64.95 0 3362840..3363712 + 290 53720421 - BPSL2812 - hypothetical protein 2783 63.17 0 3364033..3364776 - 247 53720422 - BPSL2813 - DedA family transmembrane protein 2784 72.21 +1 3364898..3366952 + 684 53720423 mutL BPSL2814 - DNA mismatch repair protein 2785 73.44 +1 3366949..3367923 + 324 53720424 miaA BPSL2815 - tRNA delta(2)-isopentenylpyrophosphate transferase 2786 70.15 0 3367941..3368342 - 133 53720425 - BPSL2816 - hypothetical protein 2787 62.33 -1 3368578..3369798 - 406 53720426 tnpA BPSL2817 - transposase 2788 67.80 0 3369943..3370998 - 351 53720427 purM BPSL2818 - phosphoribosylaminoimidazole synthetase 2789 70.66 0 3371297..3372022 + 241 53720428 - BPSL2819 - hypothetical protein 2790 64.48 0 3372044..3372730 + 228 53720429 - BPSL2820 - hypothetical protein 2791 70.03 0 3372727..3374274 + 515 53720430 - BPSL2821 - putative polynucleotide adenylyltransferase 2792 67.61 0 3374311..3374838 + 175 53720431 - BPSL2822 - putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 2793 67.69 0 3374835..3375518 + 227 53720432 - BPSL2823 - putative deoxyguanosine kinase/deoxyadenosine kinase 2794 69.36 0 3375583..3376398 + 271 53720433 panB BPSL2824 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2795 72.26 +1 3376582..3378600 - 672 53720434 - BPSL2825 - hypothetical protein 2796 66.76 0 3378622..3379752 - 376 53720435 dnaJ BPSL2826 - putative DnaJ chaperone protein 2797 64.98 0 3380019..3381971 - 650 53720436 dnaK BPSL2827 - molecular chaperone DnaK 2798 68.46 0 3382564..3383121 - 185 53720437 - BPSL2829 - putative heat shock protein 2799 69.36 0 3383618..3384025 - 135 53720438 hslR BPSL2830 - putative heat shock protein 15 2800 69.38 0 3384031..3385134 - 367 53720439 hemH BPSL2831 - ferrochelatase 2801 66.67 0 3385307..3386329 - 340 53720440 hrcA BPSL2832 - heat-inducible transcription repressor 2802 67.55 0 3386463..3387365 + 300 53720441 ppnK BPSL2833 - inorganic polyphosphate/ATP-NAD kinase 2803 71.58 0 3387395..3389044 + 549 53720442 - BPSL2834 - putative RecN DNA repair protein 2804 72.23 +1 3389443..3392226 - 927 53720443 glnE BPSL2835 - putative glutamate-ammonia-ligase adenylyltransferase 2805 72.60 +1 3392387..3396580 + 1397 53720444 - BPSL2836 - hypothetical protein 2806 70.89 0 3396632..3397459 + 275 53720445 - BPSL2837 - putative carbon-nitrogen hydrolase protein 2807 69.67 0 3397539..3399035 + 498 53720446 tldD BPSL2838 - putative DNA gyrase control protein 2808 66.76 0 3399445..3400518 + 357 53720447 aroG BPSL2839 - phospho-2-dehydro-3-deoxyheptonate aldolase 2809 67.82 0 3400797..3402005 - 402 53720448 hmpA BPSL2840 - flavohemoprotein 2810 73.65 +1 3402117..3402689 - 190 53720449 - BPSL2841 - hypothetical protein 2811 70.92 0 3402853..3404262 + 469 53720450 - BPSL2842 - putative FAD-binding oxidase 2812 69.08 0 3404327..3405820 + 497 53720451 glcD BPSL2843 - putative glycolate oxidase subunit GlcD 2813 72.64 +1 3405922..3407010 + 362 53720452 glcE BPSL2844 - glycolate oxidase FAD binding subunit 2814 69.52 0 3407017..3408243 + 408 53720453 glcF BPSL2845 - glycolate oxidase iron-sulfur subunit 2815 71.67 0 3408489..3409187 + 232 53720454 - BPSL2846 - hypothetical protein 2816 73.06 +1 3409222..3410034 + 270 53720455 - BPSL2847 - pyrroline-5-carboxylate reductase 2817 69.73 0 3410457..3411272 - 271 53720456 phnE BPSL2848 - putative phosphonate transport protein PhnE 2818 65.36 0 3411269..3412264 - 331 53720457 phnD BPSL2849 - putative phosphonates-binding periplasmic protein precursor 2819 71.81 0 3412347..3413318 - 323 53720458 phnC BPSL2850 - putative phosphonates transport ATP-binding protein PhnC 2820 72.06 0 3413504..3414634 - 376 53720459 phnM BPSL2851 - putative phosphonate metabolism PhnM protein 2821 72.81 +1 3414649..3415446 - 265 53720460 phnL BPSL2852 - putative phosphonates transport ATP-binding protein PhnL 2822 68.74 0 3415455..3416225 - 256 53720461 phnK BPSL2853 - phosphonates transport ATP-binding protein 2823 68.62 0 3416222..3417196 - 324 53720462 phnJ BPSL2854 - putative phosphonate metabolism PhnJ protein 2824 71.44 0 3417193..3418407 - 404 53720463 phnI BPSL2855 - putative phosphonate metabolism PhnI protein 2825 73.97 +1 3418407..3419036 - 209 53720464 phnH BPSL2856 - carbon-phosphorus lyase complex subunit 2826 72.50 +1 3419033..3419581 - 182 53720465 phnG BPSL2857 - putative phosphonate metabolism PhnG protein 2827 68.86 0 3419714..3420532 + 272 53720466 phnF BPSL2858 - GntR family transcriptional regulator 2828 77.32 +2 3420522..3421319 + 265 53720467 - BPSL2859 - hypothetical protein 2829 71.17 0 3421316..3421870 + 184 53720468 phnN BPSL2860 - putative ATP-binding protein PhnN 2830 66.04 0 3422301..3423251 - 316 53720469 ubiA BPSL2861 - 4-hydroxybenzoate octaprenyltransferase 2831 72.07 0 3423627..3424163 - 178 53720470 - BPSL2862 - hypothetical protein 2832 64.42 0 3424448..3424936 - 162 53720471 - BPSL2863 - ferritin DPS family DNA-binding protein 2833 78.16 +2 3425136..3425309 - 57 53720472 - BPSL2864 - hypothetical protein 2834 69.16 0 3425408..3427654 - 748 53720473 katG BPSL2865 - catalase-peroxidase protein 2835 65.62 0 3428080..3429039 - 319 53720474 oxyR BPSL2866 - oxidative stress regulatory protein 2836 73.25 +1 3429175..3431421 - 748 53720475 recG BPSL2867 - putative ATP-dependent DNA helicase 2837 71.56 0 3432038..3433120 + 360 53720476 queA BPSL2868 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2838 66.58 0 3433421..3434614 + 397 53720477 tgt BPSL2869 - queuine tRNA-ribosyltransferase 2839 60.86 -1 3435044..3435370 + 108 53720478 yajC BPSL2870 - preprotein translocase subunit YajC 2840 68.69 0 3435478..3437502 + 674 53720479 secD BPSL2871 - preprotein translocase subunit SecD 2841 63.41 0 3437518..3438468 + 316 53720480 secF BPSL2872 - preprotein translocase subunit SecF 2842 68.11 0 3438714..3439337 - 207 53720481 - BPSL2873 - hypothetical protein 2843 64.25 0 3439438..3440016 - 192 53720482 - BPSL2874 - hypothetical protein 2844 63.81 0 3440083..3440643 - 186 53720483 - BPSL2875 - hypothetical protein 2845 66.49 0 3440655..3441218 - 187 53720484 - BPSL2876 - putative cytochrome b-561 membrane protein 2846 67.73 0 3441483..3442139 + 218 53720485 - BPSL2877 - putative paraquat-inducible protein 2847 68.33 0 3442136..3442798 + 220 53720486 - BPSL2878 - putative paraquat-inducible protein 2848 67.39 0 3442785..3444446 + 553 53720487 lpw206-207 BPSL2879 - paraquat-inducible protein 2849 76.01 +1 3444443..3445213 + 256 53720488 - BPSL2880 - putative lipoprotein 2850 70.25 0 3446148..3448265 + 705 53720489 - BPSL2881 - hypothetical protein 2851 71.62 0 3448434..3449726 + 430 53720490 - BPSL2882 - putative RNA-methylase protein 2852 64.23 0 3451155..3451565 + 136 53720491 - BPSL2883 - hypothetical protein 2853 70.45 0 3452044..3452730 + 228 53720492 - BPSL2884 - hypothetical protein 2854 65.36 0 3453240..3454694 - 484 53720493 pntB BPSL2885 - NAD(P) transhydrogenase subunit beta 2855 64.85 0 3454691..3455020 - 109 53720494 pntAB BPSL2886 - NAD(P) transhydrogenase subunit alpha 67.43 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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