version 1.0
Burkholderia pseudomallei K96243 chromosome 1, complete sequence - 1..4074542 3399 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2615 65.64 0 3168176..3168757 - 193 53720254 - BPSL2644 - hypothetical protein 2616 74.36 +1 3168754..3169065 - 103 53720255 - BPSL2645 - hypothetical protein 2617 67.89 0 3169253..3170647 + 464 53720256 hemN BPSL2646 - coproporphyrinogen III oxidase 2618 64.71 0 3170681..3170986 + 101 53720257 - BPSL2647 - hypothetical protein 2619 64.83 0 3171093..3171746 + 217 53720258 pcm BPSL2648 - protein-L-isoaspartate O-methyltransferase 2620 68.52 0 3171761..3172084 + 107 53720259 - BPSL2649 - hypothetical protein 2621 69.00 0 3172177..3173505 - 442 53720260 - BPSL2650 - beta amino acid--pyruvate transaminase 2622 64.37 0 3173859..3175166 + 435 53720261 - BPSL2651 - hypothetical protein 2623 71.10 0 3175261..3176883 + 540 53720262 - BPSL2652 - putative branched-chain amino acid transport system, permease component 2624 68.16 0 3176885..3178087 + 400 53720263 - BPSL2653 - putative branched-chain amino acid transport system, permease component 2625 68.17 0 3178084..3178947 + 287 53720264 - BPSL2654 - putative ABC transport ATP-binding subunit 2626 68.98 0 3178952..3179644 + 230 53720265 - BPSL2655 - putative ABC transport ATP-binding subunit 2627 73.07 +1 3179763..3180761 + 332 53720266 UreD BPSL2656 - UreD-family accessory protein 2628 63.70 0 3180983..3181285 + 100 53720267 ureA BPSL2657 - urease subunit gamma 2629 69.28 0 3181375..3181680 + 101 53720268 ureB BPSL2658 - urease subunit beta 2630 68.19 0 3181745..3183451 + 568 53720269 ureC BPSL2659 - urease subunit alpha 2631 70.87 0 3183469..3184086 + 205 53720270 ureE BPSL2660 - urease accessory protein UreE 2632 72.25 +1 3184073..3184753 + 226 53720271 ureF BPSL2661 - urease accessory protein 2633 65.75 0 3184784..3185434 + 216 53720272 ureG BPSL2662 - urease accessory protein 2634 74.60 +1 3185671..3187056 - 461 53720273 waaA BPSL2663 - 3-deoxy-D-manno-octulosonic-acid transferase 2635 68.93 0 3187094..3187978 - 294 53720274 - BPSL2664 - hypothetical protein 2636 71.69 0 3187994..3188989 - 331 53720275 waaC1 BPSL2665 - lipopolysaccharide heptosyltransferase-1 2637 68.32 0 3189170..3190564 - 464 53720276 pgm BPSL2666 - phosphoglucomutase 2638 69.29 0 3190822..3192081 + 419 53720277 - BPSL2667 - putative lipopolysaccharide biosynthesis protein 2639 69.65 0 3192078..3192914 + 278 53720278 - BPSL2668 - putative glycosyl transferase 2640 69.69 0 3192943..3194100 + 385 53720279 - BPSL2669 - putative glycosyl transferase 2641 68.52 0 3194115..3195137 + 340 53720280 - BPSL2670 - UDP-glucose 4-epimerase 2642 65.67 0 3195165..3196271 + 368 53720281 - BPSL2671 - putative undecaprenyl phosphate N-acetylglucosaminyltransferase 2643 65.10 0 3196645..3198558 - 637 53720282 wbiI BPSL2672 - putative epimerase/dehydratase polysaccharide-related biosynthesis protein 2644 59.94 -1 3198565..3199575 - 336 53720283 wbiH BPSL2673 - putative undecaprenyl phosphate N-acetylglucosaminyltransferase 2645 66.36 0 3199593..3200558 - 321 53720284 wbiG BPSL2674 - putative epimerase/dehydratase 2646 57.88 -1 3200555..3201385 - 276 53720285 wbiF BPSL2675 - putative glycosyl transferase 2647 60.64 -1 3201460..3203301 - 613 53720286 wbiE BPSL2676 - putative glycosyl transferase 2648 59.19 -1 3203353..3205077 - 574 53720287 wbiD BPSL2677 - putative O-antigen methyl transferase 2649 59.63 -1 3205081..3206004 - 307 53720288 wbiC BPSL2678 - putative glycosyl transferase 2650 60.71 -1 3206025..3207116 - 363 53720289 wbiB BPSL2679 - putative epimerase/dehydratase 2651 56.34 -2 3207116..3208354 - 412 53720290 wbiA BPSL2680 - putative O-antigen acetylase 2652 59.08 -1 3208351..3209760 - 469 53720291 wzt BPSL2681 - ABC transporter, ATP-binding component 2653 55.64 -2 3209750..3210583 - 277 53720292 wzm BPSL2682 - putative ABC transporter, membrane permease 2654 63.10 0 3210610..3211506 - 298 53720293 rmlD BPSL2683 - dTDP-4-dehydrorhamnose reductase 2655 55.80 -2 3211503..3212054 - 183 53720294 rmlC BPSL2684 - dTDP-6-deoxy-D-glucose-3,5 epimerase 2656 63.42 0 3212039..3212932 - 297 53720295 rmlA BPSL2685 - glucose-1-phosphate thymidylyltransferase 2657 64.97 0 3212944..3214005 - 353 53720296 rmlB BPSL2686 - dTDP-glucose 4,6-dehydratase 2658 70.55 0 3214383..3215231 + 282 53720297 apaH BPSL2687 - diadenosine tetraphosphatase 2659 71.15 0 3215361..3216230 - 289 53720298 plsC BPSL2688 - putative 1-acyl-SN-glycerol-3-phosphate acyltransferase 2660 71.60 0 3216245..3217522 - 425 53720299 pyrX BPSL2689 - dihydroorotase 2661 66.18 0 3217614..3218645 - 343 53720300 pyrB BPSL2690 - aspartate carbamoyltransferase catalytic subunit 2662 73.60 +1 3218726..3219244 - 172 53720301 pyrR BPSL2691 - pyrimidine regulatory protein PyrR 2663 66.44 0 3219231..3219671 - 146 53720302 - BPSL2692 - Holliday junction resolvase-like protein 2664 65.28 0 3219668..3220246 - 192 53720303 - BPSL2693 - hypothetical protein 2665 73.50 +1 3220452..3221783 - 443 53720304 - BPSL2694 - hypothetical protein 2666 56.14 -2 3221882..3222052 - 56 53720305 rubA BPSL2695 - rubredoxin 2667 69.49 0 3222272..3223120 + 282 53720306 - BPSL2696 - putative kinase 2668 63.99 0 3223479..3225119 - 546 53720307 groEL BPSL2697 - chaperonin GroEL 2669 60.54 -1 3225167..3225460 - 97 53720308 groES BPSL2698 - co-chaperonin GroES 2670 68.10 0 3226050..3228209 - 719 53720309 - BPSL2699 - hypothetical protein 2671 64.37 0 3229267..3229701 - 144 53720310 - BPSL2700 - hypothetical protein 2672 68.45 0 3229950..3230957 + 335 53720311 - BPSL2701 - alcohol dehydrogenase 2673 71.10 0 3230981..3231949 - 322 53720312 - BPSL2702 - hypothetical protein 2674 64.34 0 3232494..3233009 - 171 53720313 - BPSL2703 - hypothetical protein 2675 64.68 0 3233125..3234030 - 301 53720314 - BPSL2704 - OmpW family exported protein 2676 65.95 0 3234027..3235280 - 417 53720315 - BPSL2705 - putative lipoprotein 2677 66.42 0 3235340..3236938 - 532 53720316 - BPSL2706 - putative lipoprotein 2678 65.32 0 3237675..3238121 - 148 53720317 - BPSL2707 - hypothetical protein 2679 63.99 0 3238401..3239633 + 410 53720318 - BPSL2708 - putative exported metallo-beta-lactamase-family protein 2680 69.73 0 3239812..3240399 + 195 53720319 - BPSL2709 - putative DNA-binding protein 2681 71.78 0 3240396..3240923 + 175 53720320 - BPSL2710 - putative acetyltransferase 2682 68.27 0 3241273..3241896 + 207 53720321 - BPSL2711 - amino acid transporter LysE 2683 68.34 0 3242349..3243485 + 378 53720322 - BPSL2712 - putative hydrolase 2684 71.66 0 3243615..3245057 + 480 53720323 - BPSL2713 - putative membrane transport protein 2685 70.60 0 3245554..3246342 + 262 53720324 - BPSL2714 - hypothetical protein 2686 65.48 0 3246675..3248522 - 615 53720325 - BPSL2715 - putative lipoprotein 2687 71.33 0 3249128..3251227 - 699 53720326 - BPSL2716 - exported hydrolase 2688 68.56 0 3251347..3251715 - 122 53720327 - BPSL2717 - putative lipoprotein 2689 70.22 0 3252110..3253627 + 505 53720328 - BPSL2718 - hypothetical protein 2690 67.92 0 3253725..3254363 + 212 53720329 - BPSL2719 - putative isomerase 2691 71.20 0 3254437..3255384 + 315 53720330 - BPSL2720 - LysR family regulatory protein 2692 74.66 +1 3255467..3256567 - 366 53720331 - BPSL2721 - FecCD-family membrane transporter protein 2693 72.22 +1 3256564..3257607 - 347 53720332 - BPSL2722 - membrane transport solute-binding protein 2694 73.31 +1 3257601..3258398 - 265 53720333 - BPSL2723 - putative Fe uptake system permease 2695 72.79 +1 3258434..3260704 - 756 53720334 - BPSL2724 - putative TonB-dependent outer-membrane receptor protein 2696 69.43 0 3261197..3261667 - 156 53720335 - BPSL2725 - hypothetical protein 2697 71.90 0 3261786..3262568 - 260 53720336 - BPSL2726 - putative solute-binding periplasmic protein 2698 70.26 0 3262952..3265315 - 787 53720337 xdhB BPSL2727 - putative xanthine dehydrogenase large subunit 2699 71.81 0 3265344..3266861 - 505 53720338 xdhA BPSL2728 - xanthine dehydrogenase 2700 71.98 0 3267141..3268364 + 407 53720339 - BPSL2729 - hypothetical protein 2701 68.03 0 3268890..3269840 - 316 53720340 - BPSL2730 - hypothetical protein 2702 71.27 0 3269871..3270869 + 332 53720341 - BPSL2731 - AraC family transcriptional regulator 2703 68.31 0 3270894..3272108 - 404 53720342 - BPSL2732 - putative aminotransferase 2704 67.38 0 3273006..3273986 + 326 53720343 - BPSL2733 - LysR family transcriptional regulator 2705 69.05 0 3274033..3275037 + 334 53720344 ldhA BPSL2734 - D-lactate dehydrogenase 2706 71.82 0 3275577..3276236 + 219 53720345 - BPSL2735 - putative oxidoreductase 2707 71.20 0 3276352..3277521 + 389 53720346 - BPSL2736 - major facilitator transporter 2708 71.01 0 3277789..3278985 + 398 53720347 - BPSL2737 - major facilitator transporter 2709 70.34 0 3279418..3280725 - 435 53720348 - BPSL2738 - putative hydrolase 2710 67.48 0 3280722..3282074 - 450 53720349 hmgA BPSL2739 - homogentisate 1,2-dioxygenase 2711 71.24 0 3282075..3283430 - 451 53720350 pcaK BPSL2740 - 4-hydroxybenzoate transporter 2712 70.13 0 3283427..3283657 - 76 53720351 - BPSL2741 - hypothetical protein 2713 71.06 0 3283700..3285361 - 553 53720352 - BPSL2742 - hypothetical protein 2714 67.40 0 3285381..3286337 - 318 53720353 - BPSL2743 - putative oxidoreductase 67.43 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0