version 1.0
Burkholderia pseudomallei K96243 chromosome 1, complete sequence - 1..4074542 3399 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2423 61.11 -1 2962365..2962652 + 95 53720062 - BPSL2456 - hypothetical protein 2424 71.63 0 2962649..2963152 + 167 53720063 - BPSL2457 - putative acetyltransferase 2425 69.58 0 2963387..2964862 - 491 53720064 - BPSL2458 - hypothetical protein 2426 70.71 0 2964859..2965848 - 329 53720065 - BPSL2459 - 2-hydroxyacid dehydrogenase 2427 66.60 0 2965914..2967356 - 480 53720066 - BPSL2460 - hypothetical protein 2428 71.78 0 2967412..2968134 - 240 53720067 - BPSL2461 - hypothetical protein 2429 62.83 0 2968219..2969418 - 399 53720068 - BPSL2462 - nicotinate phosphoribosyltransferase 2430 62.65 0 2969687..2970010 + 107 53720069 - BPSL2463 - ferredoxin 2431 66.67 0 2970498..2970977 + 159 53720070 - BPSL2464 - hypothetical protein 2432 67.11 0 2971428..2972330 + 300 53720071 - BPSL2465 - hypothetical protein 2433 71.81 0 2972515..2973039 - 174 53720072 - BPSL2466 - hypothetical protein 2434 67.12 0 2973359..2973580 + 73 53720073 - BPSL2467 - hypothetical protein 2435 71.43 0 2973705..2975111 + 468 53720074 norM BPSL2468 - putative multidrug resistance protein 2436 67.31 0 2975700..2977094 + 464 53720075 fumC BPSL2469 - fumarate hydratase 2437 66.67 0 2977573..2978079 - 168 53720076 - BPSL2470 - long-chain acyl-CoA thioester hydrolase 2438 63.59 0 2978301..2978495 - 64 53720077 - BPSL2470A - hypothetical protein 2439 73.28 +1 2979129..2979839 + 236 53720078 - BPSL2471 - transcription regulator ArsR 2440 74.63 +1 2979995..2982568 + 857 53720079 - BPSL2472 - putative prolin-rich exported protein 2441 65.43 0 2982658..2983629 - 323 53720080 - BPSL2473 - putative thymidylate synthase 2442 67.97 0 2983686..2985071 - 461 53720081 - BPSL2474 - sigma-54 interacting regulatory protein 2443 70.46 0 2985594..2985962 + 122 53720082 - BPSL2474A - hypothetical protein 2444 71.05 0 2985959..2987236 + 425 53720083 - BPSL2474B - hypothetical protein 2445 69.54 0 2987882..2989342 + 486 53720084 - BPSL2475 - sigma-54 dependant regulatory protein 2446 69.84 0 2989550..2990053 + 167 53720085 - BPSL2476 - dihydrofolate reductase 2447 64.07 0 2990180..2991643 + 487 53720086 - BPSL2477 - putative transposase 2448 69.15 0 2991780..2993150 - 456 53720087 - BPSL2478 - microcin-processing peptidase 2449 69.46 0 2993296..2993904 + 202 53720088 - BPSL2479 - hypothetical protein 2450 68.76 0 2993885..2994505 + 206 53720089 mogA BPSL2480 - molybdenum cofactor biosynthesis protein 2451 65.02 0 2994786..2995391 - 201 53720090 orn BPSL2481 - oligoribonuclease 2452 67.46 0 2995510..2996769 + 419 53720091 - BPSL2482 - peptidase 2453 68.89 0 2996766..2997710 + 314 53720092 - BPSL2483 - ribosome-associated GTPase 2454 75.47 +1 2997779..2998096 + 105 53720093 - BPSL2484 - hypothetical protein 2455 65.45 0 2998263..2999252 - 329 53720094 - BPSL2485 - adenosylcobinamide-phosphate synthase 2456 69.44 0 2999302..2999985 - 227 53720095 - BPSL2486 - hypothetical protein 2457 69.54 0 3000900..3001490 + 196 53720096 - BPSL2487 - hypothetical protein 2458 62.33 -1 3001719..3002939 - 406 53720097 tnpA BPSL2488 - transposase 2459 62.05 -1 3003117..3003506 - 129 53720098 rplS BPSL2489 - 50S ribosomal protein L19 2460 67.55 0 3003644..3004438 - 264 53720099 trmD BPSL2490 - tRNA (guanine-N(1)-)-methyltransferase 2461 68.40 0 3004440..3005075 - 211 53720100 rimM BPSL2491 - 16S rRNA-processing protein 2462 63.92 0 3005174..3005428 - 84 53720101 rpsP BPSL2492 - 30S ribosomal protein S16 2463 70.42 0 3005644..3006762 + 372 53720102 - BPSL2493 - hypothetical protein 2464 66.88 0 3006869..3007336 + 155 53720103 - BPSL2494 - hypothetical protein 2465 68.65 0 3007371..3008528 - 385 53720104 - BPSL2495 - hypothetical protein 2466 61.35 -1 3008637..3009125 - 162 53720105 lrp BPSL2496 - leucine-responsive regulatory protein 2467 68.14 0 3009273..3010559 + 428 53720106 dadA BPSL2497 - D-amino acid dehydrogenase small subunit 2468 67.62 0 3010673..3012463 - 596 53720107 - BPSL2498 - putative acyl-CoA dehydrogenase 2469 67.52 0 3012577..3013512 - 311 53720108 etfA BPSL2499 - electron transfer flavoprotein alpha-subunit 2470 64.93 0 3013528..3014277 - 249 53720109 etfB BPSL2500 - electron transfer flavoprotein beta-subunit 2471 67.17 0 3014504..3015298 - 264 53720110 - BPSL2501 - hypothetical protein 2472 66.67 0 3015372..3016025 - 217 53720111 - BPSL2502 - ABC transporter, membrane permease 2473 67.05 0 3016015..3017049 - 344 53720112 - BPSL2503 - ABC transporter, ATP-binding component 2474 72.60 +1 3017358..3018200 + 280 53720113 - BPSL2504 - putative hydrolase 2475 67.97 0 3018543..3019466 - 307 53720114 - BPSL2505 - putative histone deacetylase-family protein 2476 66.74 0 3019594..3020946 + 450 53720115 - BPSL2506 - putative exported transglycosylase 2477 64.89 0 3021173..3022075 - 300 53720116 cysM BPSL2507 - cysteine synthase B 2478 72.76 +1 3022087..3022398 - 103 53720117 - BPSL2507A - hypothetical protein 2479 71.70 0 3022411..3022728 - 105 53720118 - BPSL2508 - hypothetical protein 2480 64.35 0 3022800..3023792 - 330 53720119 gmhD BPSL2509 - putative ADP-glycero-mannoheptose epimerase 2481 70.35 0 3023851..3024774 - 307 53720120 waaE BPSL2510 - putative ADP-heptose synthase 2482 66.17 0 3024806..3026206 - 466 53720121 udg BPSL2511 - putative UDP-glucose dehydrogenase 2483 65.56 0 3026327..3027496 - 389 53720122 - BPSL2512 - hypothetical protein 2484 64.15 0 3027549..3028064 - 171 53720123 - BPSL2513 - hypothetical protein 2485 62.35 -1 3028067..3028390 - 107 53720124 ihfB BPSL2514 - integration host factor subunit beta 2486 62.00 -1 3028413..3030125 - 570 53720125 rpsA BPSL2515 - 30S ribosomal protein S1 2487 68.64 0 3030270..3030980 - 236 53720126 cmk BPSL2516 - cytidylate kinase 2488 70.82 0 3030977..3032998 - 673 161723198 aroA/tyrA BPSL2517 - bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase 2489 67.68 0 3033465..3034547 - 360 53720128 pheA BPSL2518 - chorismate mutase/prephenate dehydratase 2490 64.27 0 3034582..3035664 - 360 53720129 serC BPSL2519 - phosphoserine aminotransferase 2491 62.98 0 3035838..3036434 - 198 53720130 - BPSL2520 - hypothetical protein 2492 65.21 0 3036533..3039133 - 866 53720131 gyrA BPSL2521 - DNA gyrase subunit A 2493 62.81 0 3039644..3040318 + 224 53720132 ompA BPSL2522 - outer membrane protein a precursor 2494 65.81 0 3040487..3041185 + 232 53720133 ubiG BPSL2523 - 3-demethylubiquinone-9 3-methyltransferase 2495 73.14 +1 3041211..3041936 + 241 53720134 - BPSL2524 - putative phosphatase 2496 70.74 0 3042586..3043272 + 228 53720135 - BPSL2525 - hypothetical protein 2497 65.53 0 3043453..3043716 - 87 53720136 - BPSL2526 - hypothetical protein 2498 72.18 0 3043818..3044924 - 368 53720137 - BPSL2527 - regulatory protein 2499 70.54 0 3045013..3045528 + 171 53720138 fdsG BPSL2528 - NAD-dependent formate dehydrogenase gamma subunit 2500 71.52 0 3045525..3047090 + 521 53720139 fdsB BPSL2529 - NAD-dependent formate dehydrogenase beta subunit 2501 68.97 0 3047105..3050059 + 984 53720140 fdsA BPSL2530 - NAD-dependent formate dehydrogenase alpha subunit 2502 70.50 0 3050067..3050327 + 86 53720141 fdsD BPSL2531 - NAD-dependent formate dehydrogenase delta subunit 2503 71.82 0 3050669..3052336 - 555 53720142 - BPSL2532 - putative oxygenase 2504 72.62 +1 3053003..3054313 + 436 53720143 - BPSL2533 - hypothetical protein 2505 65.90 0 3054702..3055997 - 431 53720144 citA BPSL2534 - citrate-proton symporter 2506 71.36 0 3056494..3057558 - 354 53720145 - BPSL2535 - putative transferase 2507 74.00 +1 3058425..3059801 + 458 53720146 - BPSL2536 - amidase 2508 69.02 0 3059910..3060419 + 169 53720147 dsbB BPSL2537 - disulfide bond formation protein B 2509 72.73 +1 3060961..3061983 + 340 53720148 - BPSL2538 - hypothetical protein 2510 66.57 0 3062025..3063050 + 341 53720149 add BPSL2539 - adenosine deaminase 2511 66.81 0 3063112..3064524 + 470 53720150 - BPSL2540 - hypothetical protein 2512 70.71 0 3064550..3065860 + 436 53720151 guaD BPSL2541 - guanine deaminase 2513 68.41 0 3066348..3066920 + 190 53720152 - BPSL2542 - hypothetical protein 2514 67.37 0 3067254..3067967 - 237 53720153 - BPSL2543 - putative lipoprotein 2515 69.15 0 3068188..3070890 + 900 53720154 - BPSL2544 - alanyl aminopeptidase 2516 70.94 0 3071238..3073532 - 764 53720155 metE BPSL2545 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 2517 69.88 0 3073649..3074581 + 310 53720156 metR BPSL2546 - transcriptional activator protein 2518 65.09 0 3074711..3075727 + 338 53720157 fbp BPSL2547 - fructose-1,6-bisphosphatase 2519 68.58 0 3076324..3076584 + 86 53720158 - BPSL2547A - hypothetical protein 2520 68.13 0 3076607..3077083 + 158 53720159 - BPSL2548 - hypothetical protein 2521 69.88 0 3077252..3077500 + 82 53720160 - BPSL2549 - hypothetical protein 2522 64.08 0 3078156..3078503 + 115 53720161 - BPSL2550 - hypothetical protein 67.43 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0