version 1.0
Burkholderia pseudomallei K96243 chromosome 1, complete sequence - 1..4074542 3399 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 173 63.11 0 173641..174651 - 336 53717812 - BPSL0170 - phage major capsid protein precursor 174 66.54 0 174685..175494 - 269 53717813 - BPSL0171 - putative phage capsid scaffolding protein 175 64.92 0 175638..177407 + 589 53717814 - BPSL0172 - phage terminase, ATPase subunit 176 66.19 0 177404..178459 + 351 53717815 - BPSL0173 - putative phage portal vertex protein 177 64.99 0 178503..178859 - 118 53717816 - BPSL0174 - putative phage DNA-binding protein 178 56.79 -2 178862..179185 - 107 53717817 - BPSL0175 - hypothetical protein 179 55.87 -2 179988..180728 - 246 53717818 - BPSL0176 - putative phage-encoded membrane protein 180 66.39 0 182072..182806 + 244 53717819 - BPSL0177 - hypothetical protein 181 66.19 0 182900..183532 + 210 53717820 - BPSL0178 - hypothetical protein 182 62.69 0 183552..184004 + 150 53717821 - BPSL0179 - 6-pyruvoyl tetrahydropterin synthase 183 73.28 +1 184424..185209 + 261 53717822 - BPSL0180 - HpcH/HpaI aldolase family protein 184 73.87 +1 185206..185982 + 258 53717823 - BPSL0181 - hypothetical protein 185 65.36 0 186311..187459 - 382 53717824 rodA BPSL0182 - rod shape-determining protein 186 68.82 0 187471..189927 - 818 53717825 mrdA BPSL0183 - penicillin-binding protein 187 68.23 0 190111..190623 - 170 53717826 - BPSL0184 - putative rod shape-determining protein 188 71.32 0 190620..191693 - 357 53717827 - BPSL0185 - putative rod shape-determining protein 189 64.94 0 191813..192856 - 347 53717828 mreB BPSL0186 - putative rod shape-determining protein 190 67.69 0 193227..193520 + 97 53717829 gatC BPSL0187 - aspartyl/glutamyl-tRNA amidotransferase subunit C 191 70.15 0 193633..195123 + 496 53717830 gatA BPSL0188 - aspartyl/glutamyl-tRNA amidotransferase subunit A 192 65.51 0 195126..196598 + 490 53717831 gatB BPSL0189 - aspartyl/glutamyl-tRNA amidotransferase subunit B 193 65.83 0 196725..197564 + 279 53717832 - BPSL0190 - hypothetical protein 194 62.52 -1 197596..198366 + 256 53717833 - BPSL0191 - endonuclease/exonuclease/phosphatase family protein 195 65.82 0 198655..199719 - 354 53717834 adhC BPSL0192 - NADP-dependent alcohol dehydrogenase 196 70.05 0 199931..200875 + 314 53717835 - BPSL0193 - AraC family transcription regulator 197 73.02 +1 201249..202193 - 314 53717836 - BPSL0194 - hypothetical protein 198 67.12 0 202291..203604 - 437 53717837 - BPSL0195 - hypothetical protein 199 63.74 0 203616..204230 - 204 53717838 - BPSL0196 - hypothetical protein 200 66.49 0 204227..205372 - 381 53717839 metX BPSL0197 - homoserine O-acetyltransferase 201 68.26 0 205721..206410 - 229 53717840 slmA BPSL0198 - nucleoid occlusion protein 202 70.02 0 206377..207180 - 267 53717841 - BPSL0199 - haloacid dehalogenase-like hydrolase 203 64.11 0 207177..208076 - 299 53717842 argB BPSL0200 - acetylglutamate kinase 204 69.01 0 208670..209950 + 426 53717843 - BPSL0201 - sensor kinase protein 205 65.94 0 209961..210512 + 183 53717844 - BPSL0202 - response regulator protein 206 63.99 0 210930..212273 - 447 53717845 hslU BPSL0203 - ATP-dependent protease ATP-binding subunit 207 67.41 0 212283..212819 - 178 53717846 hslV BPSL0204 - ATP-dependent protease peptidase subunit 208 60.67 -1 213074..213490 - 138 53717847 - BPSL0205 - dksA/traR C4-type zinc finger family protein 209 62.17 -1 214040..215152 - 370 53717848 - BPSL0206 - hypothetical protein 210 70.42 0 215294..216571 - 425 53717849 - BPSL0207 - hypothetical protein 211 69.35 0 216660..217592 - 310 53717850 xerC BPSL0208 - site-specific tyrosine recombinase XerC 212 71.00 0 217630..218367 - 245 53717851 - BPSL0209 - hypothetical protein 213 70.57 0 218391..219260 - 289 53717852 dapF BPSL0210 - diaminopimelate epimerase 214 66.21 0 219301..220185 - 294 53717853 - BPSL0211 - lipid A biosynthesis lauroyl acyltransferase 215 67.17 0 220451..221638 + 395 53717854 metK BPSL0212 - S-adenosylmethionine synthetase 216 73.45 +1 221805..222158 - 117 53717855 - BPSL0212A - hypothetical protein 217 66.33 0 222402..223295 + 297 53717856 - BPSL0213 - hypothetical protein 218 63.14 0 223564..223818 + 84 53717857 - BPSL0214 - hypothetical protein 219 65.90 0 223950..224993 + 347 53717858 - BPSL0215 - aldo/keto reductase family protein 220 68.28 0 225080..225265 - 61 53717859 - BPSL0216 - hypothetical protein 221 71.41 0 225533..226396 - 287 53717860 - BPSL0217 - hypothetical protein 222 71.86 0 226751..228040 - 429 53717861 - BPSL0218 - putative transporter protein 223 65.26 0 228394..228606 + 70 53717862 - BPSL0219 - hypothetical protein 224 69.19 0 228647..229678 + 343 53717863 - BPSL0220 - serine/threonine protein kinase 225 68.43 0 230375..231793 - 472 53717864 calB BPSL0222 - putative coniferyl aldehyde dehydrogenase 226 69.76 0 231828..233507 - 559 53717865 aidB BPSL0223 - putative acyl-CoA dehydrogenase 227 69.04 0 233741..235384 + 547 53717866 - BPSL0224 - putative GMC oxidoreductase 228 76.03 +1 235424..236833 - 469 53717867 - BPSL0225 - putative flagellar hook-length control protein 229 71.96 0 236866..237318 - 150 53717868 fliJ BPSL0226 - flagellar fliJ protein 230 72.58 +1 237324..238895 - 523 53717869 fliI BPSL0227 - flagellum-specific ATP synthase 231 73.72 +1 238889..239569 - 226 53717870 fliH BPSL0228 - flagellar assembly protein H 232 64.66 0 239562..240557 - 331 53717871 fliG BPSL0229 - flagellar motor switch protein G 233 69.84 0 240547..242343 - 598 53717872 fliF BPSL0230 - flagellar MS-ring protein 234 65.20 0 242591..242932 + 113 53717873 fliE BPSL0231 - flagellar hook-basal body complex protein 235 66.67 0 243065..243499 + 144 53717874 fliS BPSL0232 - flagellar protein 236 69.42 0 243496..243822 + 108 53717875 - BPSL0233 - hypothetical protein 237 78.24 +2 243932..245443 + 503 53717876 - BPSL0234 - hypothetical protein 238 72.33 +1 245440..245757 + 105 53717877 - BPSL0235 - putative export system protein 239 69.88 0 245950..246696 + 248 53717878 - BPSL0236 - hypothetical protein 240 71.64 0 246793..247818 - 341 53717879 - BPSL0237 - hypothetical protein 241 67.74 0 248017..249420 - 467 53717880 - BPSL0238 - putative amino-acid transporter transmembrane protein 242 64.99 0 249662..250318 - 218 53717881 - BPSL0239 - response regulator protein 243 63.42 0 251607..252377 - 256 53717882 fpr BPSL0241 - ferredoxin--NADP reductase 244 72.78 +1 252590..253243 - 217 53717883 - BPSL0242 - LysE type translocator 245 72.32 +1 253309..254121 - 270 53717884 - BPSL0243 - endonuclease/exonuclease/phosphatase family protein 246 71.99 0 254128..254691 - 187 53717885 - BPSL0244 - hypothetical protein 247 67.46 0 255025..256032 + 335 53717886 - BPSL0245 - putative ATPase 248 71.03 0 256104..257225 + 373 53717887 - BPSL0246 - putative FAD dependent oxidoreductase 249 66.35 0 257360..257674 + 104 53717888 - BPSL0247 - putative iron-sulfur protein 250 67.83 0 257907..259199 + 430 53717889 - BPSL0248 - putative transporter protein 251 62.80 0 259630..261258 + 542 53717890 dppA BPSL0249 - putative periplasmic dipeptide transport protein 252 66.86 0 261370..262380 + 336 53717891 dppB BPSL0250 - putative dipeptide transport system permease protein 253 70.15 0 262479..263396 + 305 53717892 dppC BPSL0251 - putative dipeptide transport system permease protein 254 67.07 0 263398..264390 + 330 53717893 dppD BPSL0252 - putative dipeptide transport system ATP-binding protein 255 68.93 0 264387..265403 + 338 53717894 dppF BPSL0253 - dipeptide transporter ATP-binding subunit 256 72.01 0 265516..266544 + 342 53717895 - BPSL0254 - hypothetical protein 257 68.23 0 267022..267978 - 318 53717896 - BPSL0255 - hypothetical protein 258 71.45 0 267975..268727 - 250 53717897 - BPSL0256 - hypothetical protein 259 70.33 0 269350..270114 - 254 53717898 - BPSL0257 - hypothetical protein 260 73.52 +1 270173..271252 - 359 53717899 - BPSL0258 - hypothetical protein 261 72.75 +1 271249..271905 - 218 53717900 - BPSL0259 - hypothetical protein 262 62.77 0 272055..272567 + 170 53717901 - BPSL0260 - hypothetical protein 263 73.87 +1 272839..273435 - 198 53717902 - BPSL0261 - 5-formyltetrahydrofolate cyclo-ligase family protein 264 68.51 0 273457..275412 + 651 53717903 - BPSL0262 - putative transglycosylase 265 73.85 +1 275534..276493 + 319 53717904 - BPSL0263 - hypothetical protein 266 70.32 0 276548..277204 + 218 53717905 - BPSL0264 - hypothetical protein 267 72.46 +1 277201..278442 + 413 53717906 cca BPSL0265 - multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 268 62.61 -1 279104..279325 - 73 53717907 - BPSL0266 - hypothetical protein 269 68.93 0 279820..280260 - 146 53717908 - BPSL0267 - putative flagella synthesis protein 270 71.59 0 280340..280684 - 114 53717909 - BPSL0268 - putative negative regulator of flagellin synthesis 271 74.90 +1 280788..281552 - 254 161723214 flgA BPSL0269 - flagellar basal body P-ring biosynthesis protein FlgA 272 68.90 0 282577..283068 + 163 53717911 flgB BPSL0270 - flagellar basal body rod protein FlgB 67.43 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0