version 1.0
Burkholderia pseudomallei K96243 chromosome 1, complete sequence - 1..4074542 3399 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1900 70.22 0 2296086..2296310 + 74 53719539 - BPSL1925 - hypothetical protein 1901 60.38 -1 2296471..2296788 - 105 53719540 - BPSL1926 - hypothetical protein 1902 65.70 0 2296989..2297711 + 240 53719541 - BPSL1927 - hypothetical protein 1903 60.93 -1 2297950..2298228 + 92 53719542 - BPSL1929 - hypothetical protein 1904 59.69 -1 2298377..2298634 + 85 53719543 - BPSL1930 - hypothetical protein 1905 63.23 0 2298684..2298974 - 96 53719544 - BPSL1931 - hypothetical protein 1906 62.33 -1 2299152..2300372 + 406 53719545 tnpA BPSL1932 - transposase 1907 64.47 0 2300849..2302075 - 408 53719546 - BPSL1933 - hypothetical protein 1908 70.73 0 2302404..2302895 + 163 53719547 - BPSL1934 - hypothetical protein 1909 65.26 0 2303059..2304126 + 355 53719548 - BPSL1935 - hypothetical protein 1910 56.54 -2 2304829..2306013 + 394 53719549 - BPSL1936 - hypothetical protein 1911 66.43 0 2306519..2308639 + 706 53719550 - BPSL1937 - hypothetical protein 1912 66.91 0 2308761..2309165 - 134 53719551 - BPSL1938 - putative transcriptional regulator 1913 66.38 0 2309224..2309571 - 115 53719552 ihfA BPSL1939 - integration host factor subunit alpha 1914 66.75 0 2309701..2312133 - 810 53719553 pheT BPSL1940 - phenylalanyl-tRNA synthetase subunit beta 1915 63.83 0 2312221..2313243 - 340 161723202 pheS BPSL1941 - phenylalanyl-tRNA synthetase subunit alpha 1916 60.56 -1 2313383..2313742 - 119 53719555 rplT BPSL1942 - 50S ribosomal protein L20 1917 59.60 -1 2313773..2313970 - 65 53719556 rpmI BPSL1943 - 50S ribosomal protein L35 1918 57.17 -2 2314163..2314699 - 178 53719557 infC BPSL1944 - translation initiation factor IF-3 1919 62.26 -1 2314737..2316644 - 635 53719558 thrS BPSL1945 - threonyl-tRNA synthetase 1920 68.72 0 2317104..2319341 - 745 53719559 relA BPSL1946 - GTP pyrophosphokinase 1921 66.10 0 2319386..2319739 - 117 53719560 - BPSL1947 - hypothetical protein 1922 69.65 0 2319812..2320717 - 301 53719561 - BPSL1948 - putative hydrolase 1923 72.08 0 2322043..2322948 - 301 53719562 - BPSL1950 - LysR family transcriptional regulator 1924 73.30 +1 2323136..2323693 + 185 53719563 - BPSL1951 - hypothetical protein 1925 71.66 0 2323708..2324808 + 366 53719564 - BPSL1952 - putative polysaccharide deacetylase 1926 74.83 +1 2324852..2325574 + 240 53719565 - BPSL1953 - short chain dehydrogenase 1927 65.73 0 2325970..2326611 - 213 53719566 scoB BPSL1954 - succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B 1928 64.96 0 2326613..2327317 - 234 53719567 scoA BPSL1955 - succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A 1929 68.13 0 2327570..2328115 + 181 53719568 - BPSL1956 - LuxR family regulatory protein 1930 64.71 0 2328707..2330239 + 510 53719569 - BPSL1957 - putative lipoprotein 1931 67.04 0 2331168..2332241 + 357 53719570 - BPSL1958 - hypothetical protein 1932 65.97 0 2332619..2333050 - 143 53719571 - BPSL1959 - putative thioesterase 1933 66.67 0 2333095..2333874 - 259 53719572 - BPSL1960 - short chain dehydrogenase 1934 65.47 0 2334055..2335728 + 557 53719573 - BPSL1961 - putative electron transport protein 1935 70.81 0 2335915..2337024 - 369 53719574 aroC BPSL1962 - chorismate synthase 1936 68.06 0 2337389..2339323 - 644 53719575 - BPSL1963 - hypothetical protein 1937 61.94 -1 2339423..2339887 - 154 53719576 - BPSL1964 - hypothetical protein 1938 62.62 -1 2340104..2340424 + 106 53719577 - BPSL1965 - hypothetical protein 1939 68.58 0 2340641..2341945 - 434 53719578 - BPSL1966 - putative tRNA processing exoribonuclease 1940 72.25 +1 2342060..2342668 + 202 53719579 - BPSL1967 - putative Trp repressor binding protein 1941 74.00 +1 2342665..2343114 + 149 53719580 - BPSL1968 - hypothetical protein 1942 69.55 0 2343149..2344570 + 473 53719581 - BPSL1969 - putative FAD-binding reductase 1943 69.75 0 2344602..2345573 + 323 53719582 - BPSL1970 - calcineurin-like phosphoesterase 1944 68.58 0 2345922..2346863 - 313 53719583 - BPSL1971 - LysR family transcriptional regulator 1945 73.53 +1 2347021..2348973 + 650 53719584 - BPSL1972 - putative antibiotic resistance membrane protein 1946 71.03 0 2348990..2351191 + 733 53719585 - BPSL1973 - putative antibiotic resistance protein 1947 64.22 0 2351188..2351391 + 67 53719586 - BPSL1974 - hypothetical protein 1948 67.67 0 2351393..2352286 + 297 53719587 - BPSL1975 - putative antibiotic resistance protein 1949 70.60 0 2352657..2354333 - 558 53719588 - BPSL1976 - putative chemotaxis methyl-accepting membrane protein 1950 66.91 0 2354685..2355935 + 416 53719589 fsr BPSL1977 - putative fosmidomycin resistance protein 1951 71.74 0 2356296..2357084 - 262 53719590 - BPSL1978 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1952 69.04 0 2357081..2359444 - 787 53719591 - BPSL1979 - putative helicase 1953 66.21 0 2359584..2362451 + 955 53719592 valS BPSL1980 - valyl-tRNA synthetase 1954 63.83 0 2362538..2363419 + 293 53719593 galU BPSL1981 - UTP--glucose-1-phosphate uridylyltransferase 1955 73.14 +1 2363480..2364097 - 205 53719594 - BPSL1982 - putative lipoprotein 1956 69.26 0 2364186..2366579 - 797 53719595 - BPSL1983 - putative two component system, histidine kinase 1957 70.82 0 2366590..2367936 - 448 53719596 - BPSL1984 - hypothetical protein 1958 63.65 0 2367951..2368679 - 242 53719597 - BPSL1985 - putative two component system, response regulator 1959 70.54 0 2368983..2369369 - 128 53719598 - BPSL1986 - hypothetical protein 1960 62.77 0 2369645..2369875 - 76 53719599 - BPSL1987 - hypothetical protein 1961 72.83 +1 2370040..2371077 - 345 53719600 - BPSL1988 - putative oxidoreductase 1962 71.57 0 2371090..2372109 - 339 53719601 - BPSL1989 - putative oxidoreductase 1963 67.35 0 2372102..2372983 - 293 53719602 - BPSL1990 - putative transcriptional regulatory protein 1964 65.62 0 2373228..2374277 + 349 53719603 - BPSL1991 - putative sugar ABC transport system, substrate-binding periplasmic protein 1965 68.15 0 2374378..2375523 + 381 53719604 - BPSL1992 - putative sugar ABC transport system, membrane protein 1966 65.42 0 2375536..2376336 + 266 53719605 - BPSL1993 - putative ABC transport system, ATP-binding protein 1967 72.01 0 2376350..2378350 + 666 53719606 - BPSL1994 - putative carbohydrate kinase 1968 73.21 +1 2378361..2380346 + 661 53719607 - BPSL1995 - putative TPP-binding acetolactate synthase 1969 70.14 0 2380343..2381263 + 306 53719608 - BPSL1996 - putative amine catabolism-related protein 1970 69.78 0 2381263..2382066 + 267 53719609 - BPSL1997 - hypothetical protein 1971 75.04 +1 2382183..2382887 - 234 53719610 - BPSL1998 - putative branched amino acid related transport system protein 1972 73.70 +1 2382884..2385214 - 776 53719611 - BPSL1999 - putative branched amino acid related transport system, bifunctional protein (membrane and ATP-binding) 1973 72.97 +1 2385207..2386142 - 311 53719612 - BPSL2000 - putative branched amino acid transport system, membrane protein 1974 70.00 0 2386147..2386596 - 149 53719613 - BPSL2001 - putative thioesterase 1975 71.71 0 2386847..2387995 - 382 53719614 - BPSL2002 - putative iron-containing alcohol dehydrogenase 1976 68.75 0 2388211..2388546 + 111 53719615 - BPSL2003 - hypothetical protein 1977 70.00 0 2388646..2389275 - 209 53719616 - BPSL2004 - putative phosphatase 1978 63.57 0 2389489..2390166 + 225 53719617 - BPSL2005 - hypothetical protein 1979 72.13 0 2390396..2391952 - 518 53719618 - BPSL2006 - hypothetical protein 1980 73.57 +1 2392284..2393978 - 564 53719619 - BPSL2007 - hypothetical protein 1981 74.53 +1 2394125..2395090 + 321 53719620 - BPSL2008 - LysR family transcriptional regulator 1982 68.38 0 2395633..2398257 - 874 53719621 alaS BPSL2009 - alanyl-tRNA synthetase 1983 71.09 0 2398792..2400012 + 406 53719622 - BPSL2010 - putative lipid metabolism-related protein 1984 74.88 +1 2400341..2400547 - 68 53719623 - BPSL2011 - putative osmosis-related lipoprotein 1985 64.91 0 2400830..2402539 + 569 53719624 glnS BPSL2012 - glutaminyl-tRNA synthetase 1986 72.57 +1 2402897..2403370 - 157 53719625 - BPSL2013 - NUDIX family hydrolase 1987 66.93 0 2403398..2403784 - 128 53719626 - BPSL2014 - hypothetical protein 1988 70.18 0 2404072..2406120 - 682 53719627 - BPSL2015 - putative membrane attached glycosyl hydrolase 1989 67.09 0 2406423..2407133 + 236 53719628 - BPSL2016 - hypothetical protein 1990 71.36 0 2407186..2408571 - 461 53719629 - BPSL2017 - di-haem cytochrome c peroxidase 1991 67.74 0 2408727..2410400 + 557 53719630 - BPSL2018 - putative acid phosphatase 1992 68.84 0 2410598..2411791 + 397 53719631 - BPSL2019 - trans-2-enoyl-CoA reductase 1993 70.96 0 2412415..2413602 + 395 53719632 - BPSL2020 - HlyD family secretion protein 1994 66.54 0 2413784..2415403 + 539 53719633 - BPSL2021 - putative drug-resistance related membrane protein 1995 74.70 +1 2415534..2417114 + 526 53719634 - BPSL2022 - putative drug-resistance related outer-membrane protein 1996 69.73 0 2417418..2418038 - 206 53719635 - BPSL2024 - putative two component regulatory system, response regulator 1997 71.37 0 2418051..2420132 - 693 53719636 - BPSL2025 - putative two component regulatory system, sensor kinase 1998 68.74 0 2420543..2421508 - 321 53719637 - BPSL2026 - putative lipoprotein 1999 71.01 0 2421524..2423872 - 782 53719638 - BPSL2027 - putative fimbriae-related protein 67.43 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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