version 1.0
Burkholderia pseudomallei K96243 chromosome 1, complete sequence - 1..4074542 3399 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1859 68.50 0 2245609..2245881 - 90 53719498 - BPSL1885 - hypothetical protein 1860 70.20 0 2246186..2246836 + 216 53719499 - BPSL1885A - Hfq protein 1861 68.03 0 2246987..2247718 - 243 53719500 - BPSL1886 - hypothetical protein 1862 67.10 0 2247791..2249182 - 463 53719501 - BPSL1887 - putative sigma-54 related transcriptional regulatory protein 1863 70.42 0 2249199..2250905 - 568 53719502 - BPSL1888 - hypothetical protein 1864 76.01 +1 2251015..2251410 - 131 53719503 - BPSL1889 - putative lipoprotein 1865 73.81 +1 2251432..2252397 - 321 53719504 - BPSL1890 - putative lipoprotein 1866 73.29 +1 2252404..2253429 - 341 53719505 - BPSL1891 - putative outer-membrane protein 1867 73.12 +1 2253426..2254433 - 335 53719506 - BPSL1892 - putative fimbriae-related outer membrane protein 1868 67.63 0 2254426..2255769 - 447 53719507 - BPSL1893 - putative type II/IV secretion system ATP-binding protein 1869 72.48 +1 2255773..2257011 - 412 53719508 - BPSL1894 - putative fimbriae assembly protein 1870 69.83 0 2257078..2258403 - 441 53719509 - BPSL1895 - putative exported fimbriae assembly protein 1871 74.33 +1 2258467..2259366 - 299 53719510 - BPSL1896 - putative membrane fimbriae assembly protein 1872 67.31 0 2259446..2259913 - 155 53719511 - BPSL1897 - hypothetical protein 1873 66.67 0 2259910..2260410 - 166 53719512 - BPSL1898 - hypothetical protein 1874 61.40 -1 2260493..2260663 - 56 53719513 - BPSL1899 - putative fimbriae assembly related protein 1875 42.75 -2 2260771..2260908 - 45 53719514 - BPSL1900 - hypothetical protein 1876 74.47 +1 2261328..2262917 + 529 53719515 - BPSL1901 - hypothetical protein 1877 74.33 +1 2262967..2264232 + 421 53719516 - BPSL1902 - hypothetical protein 1878 66.25 0 2264383..2266062 + 559 53719517 - BPSL1903 - putative exported heme utilisation related protein 1879 63.35 0 2266285..2266767 + 160 53719518 - BPSL1904 - hypothetical protein 1880 68.61 0 2267004..2267414 - 136 53719519 - BPSL1905 - putative transposase 1881 65.30 0 2267610..2268707 - 365 53719520 - BPSL1906 - hypothetical protein 1882 65.55 0 2268814..2270244 - 476 53719521 odhL BPSL1907 - dihydrolipoamide dehydrogenase 1883 68.15 0 2270344..2271621 - 425 53719522 sucB BPSL1908 - dihydrolipoamide acetyltransferase 1884 64.36 0 2271756..2274620 - 954 53719523 kgd BPSL1909 - alpha-ketoglutarate decarboxylase 1885 64.21 0 2274974..2276437 + 487 53719524 - BPSL1910 - putative transposase 1886 66.89 0 2276550..2278376 - 608 53719525 typA BPSL1911 - GTP-binding protein 1887 66.06 0 2278669..2279166 + 165 53719526 - BPSL1912 - putative transcriptional regulatory protein 1888 70.21 0 2279266..2280762 + 498 53719527 - BPSL1913 - hypothetical protein 1889 67.96 0 2280830..2282065 + 411 53719528 emrA BPSL1914 - putative multidrug resistance protein A 1890 67.05 0 2282088..2283647 + 519 53719529 emrB BPSL1915 - putative multidrug resistance protein B 1891 71.05 0 2283918..2284853 - 311 53719530 truB BPSL1916 - tRNA pseudouridine synthase B 1892 60.70 -1 2284880..2285248 - 122 53719531 rbfA BPSL1917 - ribosome-binding factor A 1893 68.20 0 2285354..2288281 - 975 53719532 infB BPSL1918 - translation initiation factor IF-2 1894 64.84 0 2288373..2289848 - 491 53719533 nusA BPSL1919 - transcription elongation factor NusA 1895 60.82 -1 2289845..2290306 - 153 53719534 - BPSL1920 - hypothetical protein 1896 73.57 +1 2290611..2292275 - 554 53719535 - BPSL1921 - hypothetical protein 1897 70.83 0 2292339..2293706 - 455 53719536 - BPSL1922 - hypothetical protein 1898 70.43 0 2294125..2295027 - 300 53719537 - BPSL1923 - putative transcriptional regulator 1899 68.67 0 2295449..2295847 + 132 53719538 - BPSL1924 - hypothetical protein 1900 70.22 0 2296086..2296310 + 74 53719539 - BPSL1925 - hypothetical protein 1901 60.38 -1 2296471..2296788 - 105 53719540 - BPSL1926 - hypothetical protein 1902 65.70 0 2296989..2297711 + 240 53719541 - BPSL1927 - hypothetical protein 1903 60.93 -1 2297950..2298228 + 92 53719542 - BPSL1929 - hypothetical protein 1904 59.69 -1 2298377..2298634 + 85 53719543 - BPSL1930 - hypothetical protein 1905 63.23 0 2298684..2298974 - 96 53719544 - BPSL1931 - hypothetical protein 1906 62.33 -1 2299152..2300372 + 406 53719545 tnpA BPSL1932 - transposase 1907 64.47 0 2300849..2302075 - 408 53719546 - BPSL1933 - hypothetical protein 1908 70.73 0 2302404..2302895 + 163 53719547 - BPSL1934 - hypothetical protein 1909 65.26 0 2303059..2304126 + 355 53719548 - BPSL1935 - hypothetical protein 1910 56.54 -2 2304829..2306013 + 394 53719549 - BPSL1936 - hypothetical protein 1911 66.43 0 2306519..2308639 + 706 53719550 - BPSL1937 - hypothetical protein 1912 66.91 0 2308761..2309165 - 134 53719551 - BPSL1938 - putative transcriptional regulator 1913 66.38 0 2309224..2309571 - 115 53719552 ihfA BPSL1939 - integration host factor subunit alpha 1914 66.75 0 2309701..2312133 - 810 53719553 pheT BPSL1940 - phenylalanyl-tRNA synthetase subunit beta 1915 63.83 0 2312221..2313243 - 340 161723202 pheS BPSL1941 - phenylalanyl-tRNA synthetase subunit alpha 1916 60.56 -1 2313383..2313742 - 119 53719555 rplT BPSL1942 - 50S ribosomal protein L20 1917 59.60 -1 2313773..2313970 - 65 53719556 rpmI BPSL1943 - 50S ribosomal protein L35 1918 57.17 -2 2314163..2314699 - 178 53719557 infC BPSL1944 - translation initiation factor IF-3 1919 62.26 -1 2314737..2316644 - 635 53719558 thrS BPSL1945 - threonyl-tRNA synthetase 1920 68.72 0 2317104..2319341 - 745 53719559 relA BPSL1946 - GTP pyrophosphokinase 1921 66.10 0 2319386..2319739 - 117 53719560 - BPSL1947 - hypothetical protein 1922 69.65 0 2319812..2320717 - 301 53719561 - BPSL1948 - putative hydrolase 1923 72.08 0 2322043..2322948 - 301 53719562 - BPSL1950 - LysR family transcriptional regulator 1924 73.30 +1 2323136..2323693 + 185 53719563 - BPSL1951 - hypothetical protein 1925 71.66 0 2323708..2324808 + 366 53719564 - BPSL1952 - putative polysaccharide deacetylase 1926 74.83 +1 2324852..2325574 + 240 53719565 - BPSL1953 - short chain dehydrogenase 1927 65.73 0 2325970..2326611 - 213 53719566 scoB BPSL1954 - succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B 1928 64.96 0 2326613..2327317 - 234 53719567 scoA BPSL1955 - succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A 1929 68.13 0 2327570..2328115 + 181 53719568 - BPSL1956 - LuxR family regulatory protein 1930 64.71 0 2328707..2330239 + 510 53719569 - BPSL1957 - putative lipoprotein 1931 67.04 0 2331168..2332241 + 357 53719570 - BPSL1958 - hypothetical protein 1932 65.97 0 2332619..2333050 - 143 53719571 - BPSL1959 - putative thioesterase 1933 66.67 0 2333095..2333874 - 259 53719572 - BPSL1960 - short chain dehydrogenase 1934 65.47 0 2334055..2335728 + 557 53719573 - BPSL1961 - putative electron transport protein 1935 70.81 0 2335915..2337024 - 369 53719574 aroC BPSL1962 - chorismate synthase 1936 68.06 0 2337389..2339323 - 644 53719575 - BPSL1963 - hypothetical protein 1937 61.94 -1 2339423..2339887 - 154 53719576 - BPSL1964 - hypothetical protein 1938 62.62 -1 2340104..2340424 + 106 53719577 - BPSL1965 - hypothetical protein 1939 68.58 0 2340641..2341945 - 434 53719578 - BPSL1966 - putative tRNA processing exoribonuclease 1940 72.25 +1 2342060..2342668 + 202 53719579 - BPSL1967 - putative Trp repressor binding protein 1941 74.00 +1 2342665..2343114 + 149 53719580 - BPSL1968 - hypothetical protein 1942 69.55 0 2343149..2344570 + 473 53719581 - BPSL1969 - putative FAD-binding reductase 1943 69.75 0 2344602..2345573 + 323 53719582 - BPSL1970 - calcineurin-like phosphoesterase 1944 68.58 0 2345922..2346863 - 313 53719583 - BPSL1971 - LysR family transcriptional regulator 1945 73.53 +1 2347021..2348973 + 650 53719584 - BPSL1972 - putative antibiotic resistance membrane protein 1946 71.03 0 2348990..2351191 + 733 53719585 - BPSL1973 - putative antibiotic resistance protein 1947 64.22 0 2351188..2351391 + 67 53719586 - BPSL1974 - hypothetical protein 1948 67.67 0 2351393..2352286 + 297 53719587 - BPSL1975 - putative antibiotic resistance protein 1949 70.60 0 2352657..2354333 - 558 53719588 - BPSL1976 - putative chemotaxis methyl-accepting membrane protein 1950 66.91 0 2354685..2355935 + 416 53719589 fsr BPSL1977 - putative fosmidomycin resistance protein 1951 71.74 0 2356296..2357084 - 262 53719590 - BPSL1978 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1952 69.04 0 2357081..2359444 - 787 53719591 - BPSL1979 - putative helicase 1953 66.21 0 2359584..2362451 + 955 53719592 valS BPSL1980 - valyl-tRNA synthetase 1954 63.83 0 2362538..2363419 + 293 53719593 galU BPSL1981 - UTP--glucose-1-phosphate uridylyltransferase 1955 73.14 +1 2363480..2364097 - 205 53719594 - BPSL1982 - putative lipoprotein 1956 69.26 0 2364186..2366579 - 797 53719595 - BPSL1983 - putative two component system, histidine kinase 1957 70.82 0 2366590..2367936 - 448 53719596 - BPSL1984 - hypothetical protein 1958 63.65 0 2367951..2368679 - 242 53719597 - BPSL1985 - putative two component system, response regulator 67.43 MEAN 4.78 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0