version 1.0
Burkholderia mallei SAVP1 chromosome II, complete sequence - 1..1734922 1734 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 61.75 -1 6069..6902 - 277 121597123 - BMASAVP1_0006 - IS407A, transposase OrfB 2 57.20 -2 6926..7189 - 87 121597921 - BMASAVP1_0007 - IS407A, transposase OrfA 3 67.40 0 7599..7871 + 90 121596940 - BMASAVP1_0008 - hypothetical protein 4 69.03 0 7984..9378 - 464 121597374 irlS BMASAVP1_0009 - sensor histidine kinase IrlS 5 67.97 0 9375..10064 - 229 121596825 irlR BMASAVP1_0010 - transcriptional activator IrlR 6 69.85 0 10071..13304 - 1077 121597208 czcA BMASAVP1_0011 - heavy metal efflux pump CzcA 7 72.65 0 13350..14819 - 489 121596652 czcB BMASAVP1_0012 - heavy metal resistance protein CzcB 8 74.39 +1 14830..16215 - 461 121597054 czcC BMASAVP1_0013 - heavy metal resistance protein CzcC 9 73.33 0 16451..16735 - 94 121597828 - BMASAVP1_0014 - hypothetical protein 10 63.46 0 17133..17288 - 51 121597031 - BMASAVP1_0015 - hypothetical protein 11 65.50 0 17786..17956 + 56 121597683 - BMASAVP1_0017 - hypothetical protein 12 64.83 0 17944..18432 - 162 121597772 - BMASAVP1_0016 - hypothetical protein 13 62.96 -1 18759..19244 + 161 121596696 - BMASAVP1_0018 - YbaK/prolyl-tRNA synthetase associated domain-containing protein 14 69.25 0 19512..20867 + 451 121596469 - BMASAVP1_0019 - basic amino acid/polyamine antiporter (APA) family protein 15 77.91 +1 20922..21170 + 82 121597643 - BMASAVP1_0020 - hypothetical protein 16 72.09 0 21167..21775 + 202 121597186 - BMASAVP1_0021 - S54 family peptidase 17 81.48 +2 21783..21917 - 44 121597468 - BMASAVP1_0022 - hypothetical protein 18 70.97 0 21914..24472 - 852 121597791 - BMASAVP1_0023 - ATP-dependent metalloprotease FtsH 19 72.59 0 23968..24237 - 89 121597034 - BMASAVP1_0024 - hypothetical protein 20 72.32 0 24633..24809 + 58 121596865 - BMASAVP1_0025 - hypothetical protein 21 71.37 0 24823..25290 + 155 121597630 - BMASAVP1_0026 - hypothetical protein 22 70.41 0 25287..26543 + 418 121597011 - BMASAVP1_0027 - N-acyl-D-aspartate/D-glutamate deacylase 23 72.46 0 26540..27040 + 166 121597287 - BMASAVP1_0029 - hypothetical protein 24 82.61 +2 27037..27174 - 45 121597845 - BMASAVP1_0028 - hypothetical protein 25 70.24 0 27171..27842 - 223 121596580 - BMASAVP1_0030 - hypothetical protein 26 72.68 0 27993..29090 + 365 121597336 - BMASAVP1_0031 - RND family efflux transporter MFP subunit 27 68.54 0 29087..32188 + 1033 121596880 - BMASAVP1_0032 - hydrophobe/amphiphile efflux family protein 28 71.47 0 32323..33861 + 512 121597060 oprB BMASAVP1_0033 - outer membrane efflux protein OprB 29 56.57 -2 33876..34172 + 98 121597803 - BMASAVP1_0034 - hypothetical protein 30 66.34 0 34218..34835 + 205 121597237 ribA BMASAVP1_0035 - GTP cyclohydrolase II 31 70.20 0 34832..36529 + 565 121597978 toxC BMASAVP1_0036 - WD domain-containing protein 32 72.69 0 36526..37206 + 226 121597658 - BMASAVP1_0037 - hypothetical protein 33 67.84 0 37280..38977 - 565 121596450 - BMASAVP1_0038 - phage integrase family protein 34 63.09 -1 39068..39514 - 148 121597511 - BMASAVP1_0039 - hypothetical protein 35 60.42 -1 39683..39826 - 47 121597198 - BMASAVP1_0040 - hypothetical protein 36 63.58 0 39885..40922 - 345 121598150 - BMASAVP1_0041 - hypothetical protein 37 57.20 -2 41084..41347 + 87 121597000 - BMASAVP1_0042 - transposase subfamily protein 38 61.63 -1 41371..42204 + 277 121596713 - BMASAVP1_0043 - A, transposase OrfB 39 68.35 0 42465..44249 + 594 121597133 - BMASAVP1_0044 - penicillin-binding protein 40 62.67 -1 44359..44658 - 99 121597876 - BMASAVP1_0045 - hypothetical protein 41 69.56 0 44638..45639 + 333 121596892 - BMASAVP1_0046 - putative periplasmic sugar-binding protein 42 71.06 0 45698..46471 + 257 121597533 - BMASAVP1_0047 - short chain dehydrogenase 43 70.29 0 46506..48575 - 689 121597882 - BMASAVP1_0048 - putative potassium efflux system protein 44 66.67 0 48218..48502 - 94 121597526 - BMASAVP1_0049 - hypothetical protein 45 77.31 +1 48585..48800 - 71 121596797 - BMASAVP1_0050 - hypothetical protein 46 47.86 -2 49013..49129 - 38 121597238 - BMASAVP1_0051 - hypothetical protein 47 67.55 0 49476..50378 + 300 121597520 - BMASAVP1_0052 - hypothetical protein 48 68.29 0 50479..52452 + 657 121597023 - BMASAVP1_0053 - hypothetical protein 49 70.87 0 52466..52822 + 118 121596829 - BMASAVP1_0054 - hypothetical protein 50 70.97 0 53059..53337 + 92 121596890 - BMASAVP1_0055 - hypothetical protein 51 67.30 0 53495..53968 - 157 121597870 - BMASAVP1_0056 - 3-demethylubiquinone-9 3-methyltransferase family protein 52 67.85 0 54124..55134 - 336 121597128 - BMASAVP1_0057 - Mg2+/Co2+ transporter 53 77.97 +1 55273..55449 + 58 121596869 - BMASAVP1_0059 - hypothetical protein 54 71.88 0 55311..56441 + 376 121597931 - BMASAVP1_0061 - DeoR family transcriptional regulator 55 66.08 0 55442..55612 - 56 121598096 - BMASAVP1_0058 - hypothetical protein 56 62.88 -1 55626..55757 - 43 121597426 - BMASAVP1_0060 - hypothetical protein 57 73.26 0 56475..57611 + 378 121597631 - BMASAVP1_0062 - putative transporter 58 67.54 0 57641..57868 + 75 121598015 - BMASAVP1_0063 - hypothetical protein 59 68.79 0 57999..58469 - 156 121597029 - BMASAVP1_0064 - hypothetical protein 60 69.01 0 59246..60526 + 426 121598169 - BMASAVP1_0065 - putative sugar ABC transporter, periplasmic sugar-binding protein 61 66.10 0 60704..61582 + 292 121597207 - BMASAVP1_0066 - putative sugar ABC transporter, permease protein 62 68.63 0 61570..62382 + 270 121596714 - BMASAVP1_0067 - putative sugar ABC transporter, permease protein 63 70.43 0 62404..63438 + 344 121596460 - BMASAVP1_0068 - zinc-binding dehydrogenase family oxidoreductase 64 72.28 0 63442..64635 + 397 121597428 - BMASAVP1_0069 - putative sugar ABC transporter, ATP-binding protein 65 67.97 0 64632..65630 + 332 121596626 - BMASAVP1_0070 - AraC family transcriptional regulator 66 73.04 0 65627..67054 + 475 121598136 xylB-2 BMASAVP1_0071 - xylulokinase 67 70.56 0 67162..67341 - 59 121598081 - BMASAVP1_0072 - hypothetical protein 68 64.65 0 67345..67542 + 65 121597004 - BMASAVP1_0074 - hypothetical protein 69 55.56 -2 67496..67657 - 53 121596922 - BMASAVP1_0073 - hypothetical protein 70 72.53 0 67671..69206 + 511 121597580 - BMASAVP1_0075 - D-alanyl-D-alanine carboxypeptidase family protein 71 74.54 +1 69122..70519 + 465 121597293 - BMASAVP1_0076 - penicillin-binding protein 72 64.29 0 70577..70702 - 41 121597788 - BMASAVP1_0077 - hypothetical protein 73 79.49 +2 70719..70835 - 38 121596937 - BMASAVP1_0078 - hypothetical protein 74 86.36 +2 70885..71016 - 43 121598109 - BMASAVP1_0079 - hypothetical protein 75 72.00 0 71084..75340 - 1418 121597162 - BMASAVP1_0080 - putative nitrate reductase/sulfite reductase flavoprotein alpha-component 76 69.23 0 75384..75734 - 116 121596556 nirD-2 BMASAVP1_0081 - nitrite reductase [NAD(P)H], small subunit 77 69.68 0 75772..78327 - 851 121597714 nirB-2 BMASAVP1_0082 - nitrite reductase [NAD(P)H], large subunit 78 71.04 0 78371..79696 - 441 121596540 - BMASAVP1_0083 - putative nitrate transporter 79 81.29 +2 80310..80480 - 56 121597598 - BMASAVP1_0084 - hypothetical protein 80 70.18 0 80589..80702 + 37 121596841 - BMASAVP1_0085 - hypothetical protein 81 74.39 +1 80708..81523 + 271 121597402 cobA-2 BMASAVP1_0086 - uroporphyrin-III C-methyltransferase 82 70.85 0 81625..82221 + 198 121597504 - BMASAVP1_0087 - response regulator/ANTAR domain-containing protein 83 72.69 0 82239..83300 + 353 121596538 - BMASAVP1_0089 - putative regulatory protein NasS 84 75.19 +1 83255..83512 - 85 121597487 - BMASAVP1_0088 - hypothetical protein 85 67.61 0 83570..84202 - 210 121597736 - BMASAVP1_0090 - GTP cyclohydrolase I 86 63.70 0 84392..84694 + 100 121597908 - BMASAVP1_0091 - hypothetical protein 87 73.64 +1 84883..85140 - 85 121598097 - BMASAVP1_0092 - hypothetical protein 88 65.08 0 85155..85280 + 41 121597197 - BMASAVP1_0093 - hypothetical protein 89 69.09 0 85333..85497 - 54 121597854 - BMASAVP1_0094 - hypothetical protein 90 69.36 0 85767..87959 + 730 121596678 - BMASAVP1_0095 - putative lipoprotein 91 70.48 0 88503..89525 - 340 121597399 - BMASAVP1_0096 - putative acetylpolyamine aminohydrolase 92 73.99 +1 89556..90935 - 459 121596822 amaB-2 BMASAVP1_0097 - allantoate amidohydrolase 93 69.36 0 90960..92333 - 457 121596669 - BMASAVP1_0098 - major facilitator family transporter 94 63.91 0 92580..93413 + 277 121597685 - BMASAVP1_0099 - LysR family transcriptional regulator 95 71.87 0 93558..93980 - 140 121598159 - BMASAVP1_0100 - aspartate racemase 96 72.25 0 93977..95032 - 351 121597226 - BMASAVP1_0101 - LysR family transcriptional regulator 97 72.58 0 95156..95899 + 247 121597544 - BMASAVP1_0103 - short chain dehydrogenase/reductase family oxidoreductase 98 80.00 +2 95859..96008 - 49 121596881 - BMASAVP1_0102 - hypothetical protein 99 75.26 +1 96209..97627 - 472 121597187 - BMASAVP1_0104 - CAIB/BAIF family CoA transferase 100 63.05 -1 97784..98032 + 82 121597729 - BMASAVP1_0105 - hypothetical protein 68.39 MEAN 5.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.