version 1.0
Burkholderia mallei SAVP1 chromosome II, complete sequence - 1..1734922 1734 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1527 66.67 0 1522749..1522862 + 37 121598082 - BMASAVP1_1555 - hypothetical protein 1528 63.57 0 1523028..1523156 - 42 121596885 - BMASAVP1_1556 - hypothetical protein 1529 64.46 0 1523257..1523799 - 180 121597442 - BMASAVP1_1557 - hypothetical protein 1530 68.89 0 1523863..1523997 - 44 121597127 - BMASAVP1_1558 - hypothetical protein 1531 73.16 0 1523994..1525640 - 548 121597711 - BMASAVP1_1559 - indole acetimide hydrolase 1532 68.93 0 1525688..1526614 - 308 121596506 - BMASAVP1_1560 - IclR family transcriptional regulator 1533 80.70 +2 1526773..1526886 + 37 121596946 - BMASAVP1_1561 - hypothetical protein 1534 70.67 0 1527023..1527871 + 282 121597299 - BMASAVP1_1562 - fumarylacetoacetate hydrolase family protein 1535 68.68 0 1528055..1529197 - 380 121597553 lldD BMASAVP1_1563 - L-lactate dehydrogenase 1536 74.89 +1 1529262..1530185 - 307 121597305 - BMASAVP1_1564 - LysR family transcriptional regulator 1537 69.74 0 1530265..1530915 - 216 121598143 - BMASAVP1_1565 - hypothetical protein 1538 67.79 0 1530897..1532231 - 444 121597012 - BMASAVP1_1566 - major facilitator family transporter 1539 60.00 -1 1532738..1533082 + 114 121598003 - BMASAVP1_1567 - hypothetical protein 1540 65.86 0 1533573..1534694 - 373 121596862 iscS-2 BMASAVP1_1568 - cysteine desulfurase 1541 65.94 0 1534741..1535982 - 413 121597940 - BMASAVP1_1569 - major facilitator family transporter 1542 67.07 0 1535987..1536727 - 246 121596687 - BMASAVP1_1570 - metallo-beta-lactamase family protein 1543 64.30 0 1536800..1537474 + 224 121597660 - BMASAVP1_1571 - ArsR family transcriptional regulator 1544 59.33 -1 1537562..1537711 + 49 121597852 - BMASAVP1_1572 - hypothetical protein 1545 59.41 -1 1537799..1538239 + 146 121596926 - BMASAVP1_1573 - hypothetical protein 1546 70.30 0 1538342..1538506 + 54 121597146 - BMASAVP1_1575 - hypothetical protein 1547 70.17 0 1538470..1539411 - 313 121597929 - BMASAVP1_1574 - LysR family transcriptional regulator 1548 70.94 0 1539508..1539975 + 155 121598025 - BMASAVP1_1576 - D-serine ammonia-lyase 1549 72.91 0 1539975..1540823 + 282 121596663 - BMASAVP1_1577 - D-serine dehydratase 1550 72.68 0 1540994..1541908 - 304 121597725 - BMASAVP1_1578 - LysR family transcriptional regulator 1551 66.67 0 1541837..1541950 + 37 121596494 - BMASAVP1_1579 - hypothetical protein 1552 70.78 0 1542090..1542794 + 234 121596920 - BMASAVP1_1580 - short chain dehydrogenase/reductase family oxidoreductase 1553 71.74 0 1542791..1543066 + 91 121596744 - BMASAVP1_1581 - protamine P1 1554 70.83 0 1543316..1543483 - 55 121597312 - BMASAVP1_1582 - hypothetical protein 1555 72.64 0 1543541..1543858 - 105 121598165 - BMASAVP1_1583 - hypothetical protein 1556 71.43 0 1543838..1543963 + 41 121597201 - BMASAVP1_1584 - hypothetical protein 1557 63.49 0 1544168..1545490 - 440 121597928 - BMASAVP1_1585 - hypothetical protein 1558 75.81 +1 1545677..1545862 - 61 121597706 - BMASAVP1_1586 - hypothetical protein 1559 71.96 0 1545890..1547779 + 629 121598122 - BMASAVP1_1587 - hypothetical protein 1560 71.54 0 1547822..1549258 - 478 121597531 - BMASAVP1_1588 - FHA domain-containing protein 1561 68.33 0 1549313..1549672 - 119 121596783 - BMASAVP1_1589 - putative lipoprotein 1562 65.70 0 1550354..1550872 + 172 121597771 - BMASAVP1_1590 - putative lipoprotein 1563 70.30 0 1550869..1552272 + 467 121596990 - BMASAVP1_1591 - hypothetical protein 1564 72.82 0 1552288..1553604 + 438 121596826 - BMASAVP1_1592 - hypothetical protein 1565 70.85 0 1553607..1557236 + 1209 121596568 - BMASAVP1_1593 - putative lipoprotein 1566 73.52 0 1557233..1557757 + 174 121597602 - BMASAVP1_1594 - hypothetical protein 1567 75.16 +1 1557754..1557906 + 50 121596790 - BMASAVP1_1595 - hypothetical protein 1568 74.26 +1 1557912..1558148 + 78 121596709 - BMASAVP1_1597 - hypothetical protein 1569 71.93 0 1558133..1558360 - 75 121597653 - BMASAVP1_1596 - hypothetical protein 1570 74.12 +1 1558359..1560947 + 862 121598059 - BMASAVP1_1598 - serine/threonine protein kinase 1571 73.33 0 1561000..1562079 + 359 121596921 - BMASAVP1_1599 - hypothetical protein 1572 65.98 0 1562142..1562720 + 192 121596549 - BMASAVP1_1600 - hypothetical protein 1573 65.87 0 1562713..1564221 + 502 121597320 - BMASAVP1_1601 - hypothetical protein 1574 64.84 0 1564281..1564772 + 163 121596796 - BMASAVP1_1602 - hypothetical protein 1575 73.26 0 1564791..1565351 + 186 121597728 - BMASAVP1_1603 - hypothetical protein 1576 71.21 0 1565356..1567227 + 623 121598163 - BMASAVP1_1604 - hypothetical protein 1577 72.55 0 1567224..1568702 + 492 121597169 - BMASAVP1_1605 - hypothetical protein 1578 70.21 0 1568681..1571335 + 884 121596799 - BMASAVP1_1606 - putative ATP-dependent Clp protease, ATP-binding subunit ClpB 1579 65.22 0 1571332..1573536 + 734 121597925 - BMASAVP1_1607 - Rhs element Vgr protein 1580 65.14 0 1573611..1574264 + 217 121596656 - BMASAVP1_1608 - hypothetical protein 1581 61.03 -1 1574206..1575252 + 348 121597339 - BMASAVP1_1609 - YD repeat-containing protein 1582 61.75 -1 1575280..1576113 - 277 121597189 - BMASAVP1_1610 - IS407A, transposase OrfB 1583 57.20 -2 1576137..1576400 - 87 121596662 - BMASAVP1_1611 - IS407A, transposase OrfA 1584 68.50 0 1576696..1576968 + 90 121596995 - BMASAVP1_1612 - transposase, truncated 1585 64.04 0 1576980..1578656 + 558 121596989 - BMASAVP1_1613 - HlyB family hemolysin activator protein 1586 68.06 0 1578757..1581474 + 905 121597954 - BMASAVP1_1614 - hemagglutinin, homlog 1587 64.64 0 1581721..1584438 - 905 121597255 acnA BMASAVP1_1615 - aconitate hydratase 1588 68.46 0 1584486..1585994 - 502 121597188 prpD BMASAVP1_1616 - 2-methylcitrate dehydratase 1589 67.84 0 1586014..1586523 - 169 121598089 - BMASAVP1_1617 - hypothetical protein 1590 73.53 0 1586680..1587699 - 339 121596462 - BMASAVP1_1618 - putative lyase 1591 66.67 0 1587897..1588880 - 327 121597628 mdh BMASAVP1_1619 - malate dehydrogenase 1592 67.92 0 1589179..1589979 + 266 121597044 - BMASAVP1_1620 - GntR family transcriptional regulator 1593 58.27 -1 1590179..1590595 + 138 121597824 sdhC BMASAVP1_1621 - succinate dehydrogenase, cytochrome b556 subunit 1594 61.52 -1 1590600..1590968 + 122 121597322 sdhD BMASAVP1_1622 - succinate dehydrogenase, hydrophobic membrane anchor protein 1595 66.10 0 1590973..1592748 + 591 121597140 sdhA BMASAVP1_1623 - succinate dehydrogenase flavoprotein subunit 1596 63.68 0 1592770..1593471 + 233 121597902 sdhB BMASAVP1_1624 - succinate dehydrogenase iron-sulfur subunit 1597 63.74 0 1593473..1593745 + 90 121597056 - BMASAVP1_1625 - hypothetical protein 1598 62.52 -1 1593798..1595099 + 433 121596919 gltA BMASAVP1_1626 - type II citrate synthase 1599 73.64 +1 1595196..1596170 - 324 121597724 - BMASAVP1_1627 - AraC family transcriptional regulator 1600 56.99 -2 1596204..1596389 + 61 121596737 - BMASAVP1_1628 - hypothetical protein 1601 61.75 -1 1596400..1597233 - 277 121597500 - BMASAVP1_1629 - IS407A, transposase OrfB 1602 57.20 -2 1597257..1597520 - 87 121597382 - BMASAVP1_1630 - IS407A, transposase OrfA 1603 70.97 0 1597689..1597874 + 61 121596548 - BMASAVP1_1631 - hypothetical protein 1604 75.00 +1 1598155..1598418 + 87 121597153 - BMASAVP1_1632 - hypothetical protein 1605 71.57 0 1598732..1599976 + 414 121598114 - BMASAVP1_1633 - putative dioxygenase 1606 70.37 0 1600228..1602951 - 907 121596676 - BMASAVP1_1634 - 2-oxoacid dehydrogenase subunit E1 1607 66.86 0 1603112..1603639 + 175 121597900 - BMASAVP1_1635 - bkd operon transcriptional regulator 1608 53.19 -2 1603808..1603948 - 46 121597384 - BMASAVP1_1636 - hypothetical protein 1609 68.15 0 1604123..1604257 + 44 121596703 - BMASAVP1_1637 - hypothetical protein 1610 69.20 0 1604359..1605306 + 315 121597137 - BMASAVP1_1638 - hypothetical protein 1611 67.21 0 1605299..1606594 + 431 121596487 - BMASAVP1_1639 - putative EDTA monooxygenase 1612 75.00 +1 1606668..1606823 - 51 121598170 - BMASAVP1_1640 - hypothetical protein 1613 67.52 0 1606986..1608395 + 469 121597181 leuC BMASAVP1_1641 - isopropylmalate isomerase large subunit 1614 63.59 0 1608619..1609269 + 216 121597969 leuD BMASAVP1_1642 - isopropylmalate isomerase small subunit 1615 67.70 0 1609318..1610385 + 355 121597129 leuB BMASAVP1_1643 - 3-isopropylmalate dehydrogenase 1616 63.33 0 1610567..1610716 - 49 121596844 - BMASAVP1_1644 - hypothetical protein 1617 65.91 0 1610655..1611848 + 397 121596925 asd BMASAVP1_1645 - aspartate-semialdehyde dehydrogenase 1618 76.56 +1 1611984..1614611 + 875 121596604 - BMASAVP1_1646 - hypothetical protein 1619 68.02 0 1614611..1615423 + 270 121597592 truA BMASAVP1_1647 - tRNA pseudouridine synthase A 1620 71.65 0 1615423..1616184 + 253 121597119 trpF BMASAVP1_1648 - N-(5'-phosphoribosyl)anthranilate isomerase 1621 67.00 0 1616256..1617449 + 397 121598133 trpB BMASAVP1_1649 - tryptophan synthase subunit beta 1622 66.43 0 1617459..1618307 + 282 121596899 - BMASAVP1_1650 - N-6 adenine-specific DNA methylase 1623 70.22 0 1618351..1619166 + 271 121597955 trpA BMASAVP1_1651 - tryptophan synthase subunit alpha 1624 66.32 0 1619246..1620118 + 290 121596953 accD BMASAVP1_1652 - acetyl-CoA carboxylase subunit beta 1625 67.97 0 1620158..1621543 + 461 121597599 folC BMASAVP1_1653 - FolC bifunctional protein 1626 74.24 +1 1621663..1622388 + 241 121597080 - BMASAVP1_1654 - sporulation repeat-containing protein 68.39 MEAN 5.20 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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